BLASTX nr result

ID: Forsythia21_contig00028214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00028214
         (323 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011100490.1| PREDICTED: U1 small nuclear ribonucleoprotei...    65   1e-08
ref|XP_011100421.1| PREDICTED: U1 small nuclear ribonucleoprotei...    65   1e-08
ref|XP_012077243.1| PREDICTED: U2 small nuclear ribonucleoprotei...    62   1e-07
ref|XP_012077242.1| PREDICTED: U2 small nuclear ribonucleoprotei...    62   1e-07
ref|XP_006474441.1| PREDICTED: U1 small nuclear ribonucleoprotei...    57   4e-06
ref|XP_006474440.1| PREDICTED: U1 small nuclear ribonucleoprotei...    57   4e-06
ref|XP_006474439.1| PREDICTED: U1 small nuclear ribonucleoprotei...    57   4e-06
ref|XP_006474442.1| PREDICTED: U1 small nuclear ribonucleoprotei...    57   4e-06

>ref|XP_011100490.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
           [Sesamum indicum]
          Length = 239

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = -2

Query: 322 YKFDDKKPGSPLLSIHFAHFPFRLPSDRDEQ*FGG 218
           YKFDDKK  SPLL IHFAHFPFRLPS++DEQ FGG
Sbjct: 203 YKFDDKKQNSPLLRIHFAHFPFRLPSNQDEQRFGG 237


>ref|XP_011100421.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
           [Sesamum indicum]
          Length = 248

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = -2

Query: 322 YKFDDKKPGSPLLSIHFAHFPFRLPSDRDEQ*FGG 218
           YKFDDKK  SPLL IHFAHFPFRLPS++DEQ FGG
Sbjct: 212 YKFDDKKQNSPLLRIHFAHFPFRLPSNQDEQRFGG 246


>ref|XP_012077243.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X2
           [Jatropha curcas]
          Length = 229

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = -2

Query: 322 YKFDDKKPGSPLLSIHFAHFPFRLPSDRDEQ*FGGLQ 212
           Y+FDD+KP SP+L IHFAHFPFRLPSD DEQ  G L+
Sbjct: 193 YRFDDRKPDSPVLKIHFAHFPFRLPSDHDEQRVGILR 229


>ref|XP_012077242.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X1
           [Jatropha curcas] gi|643724867|gb|KDP34068.1|
           hypothetical protein JCGZ_07639 [Jatropha curcas]
          Length = 230

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = -2

Query: 322 YKFDDKKPGSPLLSIHFAHFPFRLPSDRDEQ*FGGLQ 212
           Y+FDD+KP SP+L IHFAHFPFRLPSD DEQ  G L+
Sbjct: 194 YRFDDRKPDSPVLKIHFAHFPFRLPSDHDEQRVGILR 230


>ref|XP_006474441.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X3
           [Citrus sinensis]
          Length = 242

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = -2

Query: 322 YKFDDKKPGSPLLSIHFAHFPFRLPSDRDEQ 230
           YKFDDKKP SP L I FAHFPFRLPSD DE+
Sbjct: 208 YKFDDKKPDSPALKIQFAHFPFRLPSDGDEK 238


>ref|XP_006474440.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
           [Citrus sinensis]
          Length = 276

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = -2

Query: 322 YKFDDKKPGSPLLSIHFAHFPFRLPSDRDEQ 230
           YKFDDKKP SP L I FAHFPFRLPSD DE+
Sbjct: 242 YKFDDKKPDSPALKIQFAHFPFRLPSDGDEK 272


>ref|XP_006474439.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
           [Citrus sinensis]
          Length = 287

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = -2

Query: 322 YKFDDKKPGSPLLSIHFAHFPFRLPSDRDEQ 230
           YKFDDKKP SP L I FAHFPFRLPSD DE+
Sbjct: 253 YKFDDKKPDSPALKIQFAHFPFRLPSDGDEK 283


>ref|XP_006474442.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X4
           [Citrus sinensis] gi|343887275|dbj|BAK61821.1|
           RRM-containing protein [Citrus unshiu]
          Length = 231

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = -2

Query: 322 YKFDDKKPGSPLLSIHFAHFPFRLPSDRDEQ 230
           YKFDDKKP SP L I FAHFPFRLPSD DE+
Sbjct: 197 YKFDDKKPDSPALKIQFAHFPFRLPSDGDEK 227


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