BLASTX nr result

ID: Forsythia21_contig00026700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00026700
         (721 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339696.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    65   5e-08
ref|XP_006339695.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    65   5e-08
gb|KFK25225.1| hypothetical protein AALP_AA8G083700 [Arabis alpina]    64   7e-08
ref|NP_196478.2| DEAD-box ATP-dependent RNA helicase 26 [Arabido...    64   1e-07
dbj|BAB10010.1| RNA helicase-like protein [Arabidopsis thaliana]       63   2e-07
ref|XP_002871351.1| hypothetical protein ARALYDRAFT_487703 [Arab...    63   2e-07
ref|XP_011023197.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   1e-06
ref|XP_010452876.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   1e-06
ref|XP_006286450.1| hypothetical protein CARUB_v10000281mg [Caps...    60   1e-06
ref|XP_010491508.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    59   2e-06
ref|XP_002302625.1| DEAD box RNA helicase family protein [Populu...    59   3e-06
ref|XP_006399367.1| hypothetical protein EUTSA_v10012704mg [Eutr...    59   3e-06
ref|XP_008233195.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   8e-06

>ref|XP_006339696.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like isoform X2
           [Solanum tuberosum]
          Length = 869

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
 Frame = -2

Query: 471 RSRAIPVISRIFPHKFKYQSLGSLKFEKRLLQEQFNIRKI----------WGLELRASNG 322
           + + IPV SR+FPHK KY+S+G   F     QEQ  +R+            G ++R S  
Sbjct: 31  KPKTIPVFSRMFPHKLKYRSIG---FPILAAQEQ-ELRRFSSRSGRPRPGSGADVRVSKS 86

Query: 321 LVKDEAELGDRVGGLQGNSD--NDEVIGSENGKCSIRKRCRKSGKKGELDNTGKQGGGSY 148
           L++DEAEL D V GL+ +S     +V    +     R+R R  GK G   N G+  G   
Sbjct: 87  LIEDEAELSDWVSGLRSDSSFTKTQVYSESDDNEGDRERSR--GKFGNRRNGGEDRGEKR 144

Query: 147 TSDWEEKTGRDRGGDGDEMTRERNG 73
             D ++ +G  R G G   +  RNG
Sbjct: 145 RRD-DDFSGPGRRGGGPMQSNSRNG 168


>ref|XP_006339695.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like isoform X1
           [Solanum tuberosum]
          Length = 894

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
 Frame = -2

Query: 471 RSRAIPVISRIFPHKFKYQSLGSLKFEKRLLQEQFNIRKI----------WGLELRASNG 322
           + + IPV SR+FPHK KY+S+G   F     QEQ  +R+            G ++R S  
Sbjct: 31  KPKTIPVFSRMFPHKLKYRSIG---FPILAAQEQ-ELRRFSSRSGRPRPGSGADVRVSKS 86

Query: 321 LVKDEAELGDRVGGLQGNSD--NDEVIGSENGKCSIRKRCRKSGKKGELDNTGKQGGGSY 148
           L++DEAEL D V GL+ +S     +V    +     R+R R  GK G   N G+  G   
Sbjct: 87  LIEDEAELSDWVSGLRSDSSFTKTQVYSESDDNEGDRERSR--GKFGNRRNGGEDRGEKR 144

Query: 147 TSDWEEKTGRDRGGDGDEMTRERNG 73
             D ++ +G  R G G   +  RNG
Sbjct: 145 RRD-DDFSGPGRRGGGPMQSNSRNG 168


>gb|KFK25225.1| hypothetical protein AALP_AA8G083700 [Arabis alpina]
          Length = 777

 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
 Frame = -2

Query: 495 MKPGPLVRRSRAIPVISRIFPHKFKYQSLGS-LKFEKR--LLQEQFNIRKIWGLELRASN 325
           M  G L+   R++PV+S+ FP + KY  LGS + F  R    + +F  R   G E+R S 
Sbjct: 24  MNSGALIYSFRSVPVLSKAFPFRLKYIGLGSRVSFSTRPEKTRTEFERRGRDGGEIRVSK 83

Query: 324 GLVKDEAELGDRVGGLQGNSDNDEVIGSE--NGKCSIRKR-CRKSGKKGELDNTGKQGGG 154
            L++DEAEL D V  L+ +S   +    E  +G   +R+   R + +     N G + GG
Sbjct: 84  SLIEDEAELSDWVSDLRPSSMRGKFTSDEDDSGPDPVRRNVARDNSRSPRRGNEGDRFGG 143

Query: 153 SYTSDWEEKTGRDRGGDGDEMTRERNGVAQRQGNSDKVE 37
               +  ++ G  R G   EM R   G ++R+ + + VE
Sbjct: 144 PKRGNEGDRFGGSRRGKEGEMDR-FGGSSRRRTSGEPVE 181


>ref|NP_196478.2| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana]
           gi|109893654|sp|Q9FNM7.2|RH26_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 26
           gi|332003946|gb|AED91329.1| DEAD-box ATP-dependent RNA
           helicase 26 [Arabidopsis thaliana]
          Length = 850

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
 Frame = -2

Query: 501 SGMKPGPLVRRSRAIPVISRIFPHKFKYQSLGS-LKFEKR--LLQEQFNIRKIWGLELRA 331
           + M  G L+   R++PV+S+ FP + KY  LGS + F  R    Q +F  R   G E+RA
Sbjct: 22  ASMNSGALIYSFRSVPVLSKAFPFRLKYIGLGSRVNFSTRPERSQPEFARRSGAGGEIRA 81

Query: 330 SNGLVKDEAELGD-----RVGGLQG----------------NSDNDEVIGSENGK--CSI 220
           S  L++DEAEL D     R   L+G                N D D   G   G+   S 
Sbjct: 82  SKSLIEDEAELSDWVSDLRTSSLRGKFTSDEDNADPEVVRRNVDRDTSRGPRRGREGQSD 141

Query: 219 RKRCRKSGKKGELDNTG----KQGGGSYTSDWEEKTGRDRGGDGDEMTRERNGVAQRQGN 52
           R    K GK+GE+D  G    ++  G     +  K   DR G  +   + ++  +  +G 
Sbjct: 142 RFGGAKRGKEGEMDRFGSPNRRRTSGEPADSFGNKRLGDREGSRNGRVQGKSSESSFRGR 201

Query: 51  SDK 43
           SD+
Sbjct: 202 SDR 204


>dbj|BAB10010.1| RNA helicase-like protein [Arabidopsis thaliana]
          Length = 827

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
 Frame = -2

Query: 495 MKPGPLVRRSRAIPVISRIFPHKFKYQSLGS-LKFEKR--LLQEQFNIRKIWGLELRASN 325
           M  G L+   R++PV+S+ FP + KY  LGS + F  R    Q +F  R   G E+RAS 
Sbjct: 1   MNSGALIYSFRSVPVLSKAFPFRLKYIGLGSRVNFSTRPERSQPEFARRSGAGGEIRASK 60

Query: 324 GLVKDEAELGD-----RVGGLQG----------------NSDNDEVIGSENGK--CSIRK 214
            L++DEAEL D     R   L+G                N D D   G   G+   S R 
Sbjct: 61  SLIEDEAELSDWVSDLRTSSLRGKFTSDEDNADPEVVRRNVDRDTSRGPRRGREGQSDRF 120

Query: 213 RCRKSGKKGELDNTG----KQGGGSYTSDWEEKTGRDRGGDGDEMTRERNGVAQRQGNSD 46
              K GK+GE+D  G    ++  G     +  K   DR G  +   + ++  +  +G SD
Sbjct: 121 GGAKRGKEGEMDRFGSPNRRRTSGEPADSFGNKRLGDREGSRNGRVQGKSSESSFRGRSD 180

Query: 45  K 43
           +
Sbjct: 181 R 181


>ref|XP_002871351.1| hypothetical protein ARALYDRAFT_487703 [Arabidopsis lyrata subsp.
           lyrata] gi|297317188|gb|EFH47610.1| hypothetical protein
           ARALYDRAFT_487703 [Arabidopsis lyrata subsp. lyrata]
          Length = 794

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
 Frame = -2

Query: 501 SGMKPGPLVRRSRAIPVISRIFPHKFKYQSLGS-LKFEKR--LLQEQFNIRKIWGLELRA 331
           + M  G L+   R++PV+S+ FP + KY  LGS + F  R    Q +F  R   G ++RA
Sbjct: 22  ASMNSGALIYSFRSVPVLSKAFPFRLKYIGLGSRVNFSTRPERSQPEFGRRSGAGGDIRA 81

Query: 330 SNGLVKDEAELGD-----RVGGLQG----------------NSDNDEVIGSENGKC--SI 220
           S  L++DEAEL D     R   L+G                N D D   G   G    S 
Sbjct: 82  SKSLIEDEAELSDWVSDLRTSSLRGKFTSDEENSDPEVVRRNVDRDNSRGPRRGSVGQSD 141

Query: 219 RKRCRKSGKKGELDNTG----KQGGGSYTSDWEEKTGRDRGGDGDEMTRERNGVAQRQGN 52
           R    K GK+GE+D  G    ++  G     +  K   DR G  +   + ++  +  +G 
Sbjct: 142 RFGGAKRGKEGEMDRFGSPNHRRTSGEPADSFRNKRLGDREGSRNGRVQGKSSDSSFRGR 201

Query: 51  SDK 43
           +D+
Sbjct: 202 NDR 204


>ref|XP_011023197.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Populus
           euphratica]
          Length = 758

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 48/151 (31%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
 Frame = -2

Query: 495 MKPGPLVRRSRAIPVISRIFPHKFKYQSLGSLKFEKRLLQ----------EQFNIRKIWG 346
           M  G  +   R IP+ SR+FP K KY    S +F  R  +           +    ++  
Sbjct: 24  MNVGLSLNTPRPIPIFSRVFPFKLKYLGFAS-QFSSRSFRPGPTRSRPEFSRLTGGRVER 82

Query: 345 LELRASNGLVKDEAELGDRVGGLQGNSDNDEVIGSENGKCSIRKRCR-KSGKKGELDNTG 169
            E R S  L++DEAEL D V  L+ NS   +V   +     + +R R KSG+  E D+ G
Sbjct: 83  GESRPSKSLIEDEAELSDWVSDLRTNSIRSQVTSEDEPDSDMGRRYRSKSGRARETDSGG 142

Query: 168 KQGGGSYTSDWEEKTGRD-RGGDGDEMTRER 79
            +GGG+    +  K  RD    +  E TR R
Sbjct: 143 NKGGGA--GGFSMKRRRDSNSNEFSEPTRRR 171


>ref|XP_010452876.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26 [Camelina sativa]
          Length = 760

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
 Frame = -2

Query: 495 MKPGPLVRRSRAIPVISRIFPHKFKYQSLGS-LKFEKR--LLQEQFNIRKIWGLELRASN 325
           M  G L+   R++PV+S+ FP + KY  LGS + F  R    Q +F  R   G E+RAS 
Sbjct: 24  MNSGALIYSFRSVPVLSKAFPFRLKYIGLGSRVNFSTRPERSQPEFVRRSGAGGEIRASK 83

Query: 324 GLVKDEAELGDRVGGLQGNSDNDEVIGSE--NGKCSIRK---------RCRKSGKKGELD 178
            L++DEAEL D V  L+ +S   +    E  +G   +R+         R  + G++G+ D
Sbjct: 84  SLIEDEAELSDWVSDLRTSSSRGKFTSEEDNSGPELVRRNVVDRDNSSRGPRRGREGQSD 143

Query: 177 NTGKQGGGSYTSDWEEKTGRDRGGDGDEMTRERNGV--AQRQGNSDK 43
             G    G    + +   G DR     +  R R G    + QG S +
Sbjct: 144 RFGGARRGK-EGEMDRFGGSDRRRTTSDSFRNREGARNGRIQGKSSE 189


>ref|XP_006286450.1| hypothetical protein CARUB_v10000281mg [Capsella rubella]
           gi|482555156|gb|EOA19348.1| hypothetical protein
           CARUB_v10000281mg [Capsella rubella]
          Length = 766

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
 Frame = -2

Query: 495 MKPGPLVRRSRAIPVISRIFPHKFKYQSLGS-LKFEKR--LLQEQFNIRKIWGLELRASN 325
           M  G L+   R++PV+S+ FP + KY  LGS + F  R    Q +F  R+  G E+RAS 
Sbjct: 24  MNSGALIYSFRSVPVLSKAFPFRLKYIGLGSRVSFSTRPERSQAEFGRRRGAGGEIRASK 83

Query: 324 GLVKDEAELGDRVGGLQGNSDNDEVIGSE--NGKCSIRKRCRKSGKKGELDNTGKQGGGS 151
            L++DEAEL D V  L+ +S   +    E  +G   +R+   +   +G     G++G   
Sbjct: 84  SLIEDEAELSDWVSDLRTSSSRGKFTSDEDNSGPEVVRRTVDRDSNRG--PRRGREG--- 138

Query: 150 YTSDWEEKTGRDRGGDGDEMTR 85
                 ++ G  R G   EM R
Sbjct: 139 ----QSDRFGGARRGKEGEMDR 156


>ref|XP_010491508.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like [Camelina
           sativa]
          Length = 763

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
 Frame = -2

Query: 495 MKPGPLVRRSRAIPVISRIFPHKFKYQSLGS-LKFEKR--LLQEQFNIRKIWGLELRASN 325
           M  G L+   R++PV+S+ FP + KY  LGS + F  R    Q +F  R   G E+RAS 
Sbjct: 24  MNSGALIYSFRSVPVLSKAFPFRLKYIGLGSRVNFSTRPERSQPEFVRRSGPGGEIRASK 83

Query: 324 GLVKDEAELGDRVGGLQ-GNSDNDEVIGSE--NGKCSIRK---------RCRKSGKKGEL 181
            L++DEAEL D V  L+ G+S   +    E  +G   +R+         R  + G++G+ 
Sbjct: 84  SLIEDEAELSDWVSDLRTGSSSRGKFTSDEDNSGPELVRRNVVDRDNSSRGPRRGREGQS 143

Query: 180 DNTGKQGGGSYTSDWEEKTGRDRGGDGDEMTRERNG 73
           D  G    G   S+ +   G DR     +  R R G
Sbjct: 144 DRFGGARRGK-ESEMDRFGGSDRRRTTSDSFRNREG 178


>ref|XP_002302625.1| DEAD box RNA helicase family protein [Populus trichocarpa]
           gi|222844351|gb|EEE81898.1| DEAD box RNA helicase family
           protein [Populus trichocarpa]
          Length = 758

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
 Frame = -2

Query: 495 MKPGPLVRRSRAIPVISRIFPHKFKYQSLGSLKFEKRLLQEQFNIRKIWGL--------- 343
           M  G  +   R IP+ SR+FP K KY    S    +    E    R  +           
Sbjct: 24  MNVGLSLNTPRPIPIFSRVFPFKLKYLGFASQFSTRSFRPEPIRSRPEFSRLTGGGVERG 83

Query: 342 ELRASNGLVKDEAELGDRVGGLQGNSDNDEVIGSENGKCSIRKRCR-KSGKKGELDNTGK 166
           E R S  L++DEAEL D V  L+ NS   +V   +     + +R R K+G+  E D+ G 
Sbjct: 84  ESRPSKSLIEDEAELSDWVSDLRTNSIRGQVTSEDEPDSDMGRRSRSKTGRARETDSGGN 143

Query: 165 QGGGS 151
           +GGG+
Sbjct: 144 KGGGA 148


>ref|XP_006399367.1| hypothetical protein EUTSA_v10012704mg [Eutrema salsugineum]
           gi|557100457|gb|ESQ40820.1| hypothetical protein
           EUTSA_v10012704mg [Eutrema salsugineum]
          Length = 821

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
 Frame = -2

Query: 501 SGMKPGPLVRRSRAIPVISRIFPHKFKYQSLGS-LKFEKRLLQEQ--FNIRKIWGLELRA 331
           + M    L+   R++PV+S+ FP + KY  LGS + F  R  + Q  F  R   G E+RA
Sbjct: 49  ASMNSVALIYSFRSVPVLSKAFPLRLKYLGLGSRVNFSTRPERTQTGFGRRSRNGGEIRA 108

Query: 330 SNGLVKDEAELGD-----RVGGLQGNSDNDEVIGSENGKCSIRKRCRKSGKKGELDNTGK 166
           S  L++DEAEL D     R   L+G   +DE    ++G   +R+   +   +G    +  
Sbjct: 109 SKSLIEDEAELSDWVSDLRPSSLRGKFTSDE---DDSGPDRVRRNVDRDTSRGPKRES-- 163

Query: 165 QGGGSYTSDWEEKTGRDRGGDGDEMTRERNGVAQRQGNSDK 43
                  SD  + + R R G  D     R G   R+G SD+
Sbjct: 164 ------QSDRFDGSRRGREGQSDRFDGSRRG---REGQSDR 195


>ref|XP_008233195.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Prunus
           mume]
          Length = 834

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
 Frame = -2

Query: 495 MKPGPLVRRSRAIPVISRIFPHKFKYQSLG---SLKFEKRLLQEQFNIRKIW-------G 346
           MK  P +  SRA+P++SR+FP + +Y  LG   SL+ E+      F   +         G
Sbjct: 34  MKFAPTLSSSRAVPILSRVFPLRLRYMGLGFRRSLQIERAFSTRAFRGPRTGSGSELPRG 93

Query: 345 LELR---ASNGLVKDEAELGDRVGGLQGNSDNDEVIGSENGKCSIRKRCRKSGKKGELDN 175
            E R   AS  L++DEAEL D V  L+ +S      G E+     R R R+ G   E   
Sbjct: 94  YERRAGGASKSLIEDEAELSDWVSELRSDSPR----GREDELEGRRGRVRERGTDRESYP 149

Query: 174 TGKQGGGSYTSDWEEKTGRDRGGDGDEMTRERNGVAQRQGNSDK 43
             K    S + D+ E   RD        TR   G+++R  N  +
Sbjct: 150 MKKSRRESDSGDFGESRRRDFRSPNQSFTR-NGGISKRFDNKSE 192


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