BLASTX nr result

ID: Forsythia21_contig00026128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00026128
         (336 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009792607.1| PREDICTED: pentatricopeptide repeat-containi...    68   3e-09
ref|XP_011069582.1| PREDICTED: pentatricopeptide repeat-containi...    67   4e-09

>ref|XP_009792607.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Nicotiana sylvestris]
          Length = 941

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
 Frame = -2

Query: 239 MASLKLSVSLDNSSYEPKKKFDVKSLRLPS----ICSFSGYVNIHCAFIVKPFYKLKHIR 72
           MASLKLS  +D S    K KF+VK+L        + SF GY  +  AF+V PF  LKHIR
Sbjct: 1   MASLKLSFYVDKSWESKKLKFNVKALNFTDSKCLVPSFLGYGYVGGAFVVNPFCNLKHIR 60

Query: 71  VSRIDTEFYETSEENLVD 18
           VSR++TE  ETSE +L+D
Sbjct: 61  VSRLETEELETSELSLLD 78


>ref|XP_011069582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Sesamum indicum]
          Length = 937

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 40/73 (54%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -2

Query: 239 MASLKLSVSLDNSSYEPKK-KFDVKSLRLPSICSFSGYVNIHCAFIVKPFYKLKHIRVSR 63
           MASLKLSVS+DNS YE KK +F + SL+  S   FSGYV  + A IVKPF KLK IRV+ 
Sbjct: 1   MASLKLSVSVDNSCYESKKQRFALNSLKFGSSTLFSGYVITNGALIVKPFCKLKQIRVNG 60

Query: 62  IDTEFYETSEENL 24
           +  E     E  L
Sbjct: 61  LGNELLGAPESTL 73


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