BLASTX nr result

ID: Forsythia21_contig00023448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00023448
         (690 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011076930.1| PREDICTED: transcription factor TFIIIB compo...    54   2e-07
ref|XP_011093300.1| PREDICTED: transcription factor TFIIIB compo...    54   3e-07
ref|XP_011093305.1| PREDICTED: transcription factor TFIIIB compo...    54   3e-07
ref|XP_011093307.1| PREDICTED: transcription factor TFIIIB compo...    54   3e-07

>ref|XP_011076930.1| PREDICTED: transcription factor TFIIIB component B''-like [Sesamum
           indicum]
          Length = 701

 Score = 54.3 bits (129), Expect(2) = 2e-07
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +2

Query: 383 PAFPRD-VLDLSAVGFTCAIPTESMPELLVNEDPIDLMETYQLDSGFLGDHPEVVPEMPA 559
           P F +D VLDLS++GFT  +PTE+  EL +NE+ ++L E  QLDSG   + P   PE+PA
Sbjct: 265 PTFQQDDVLDLSSLGFTHTLPTEASSELPLNEESMNLTEMTQLDSGIPLECP---PEIPA 321

Query: 560 ELVN 571
           +L +
Sbjct: 322 KLAS 325



 Score = 28.5 bits (62), Expect(2) = 2e-07
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 226 RSGKFQPKPKIQVQNKI 276
           R+GKFQPKPK+Q+   I
Sbjct: 220 RTGKFQPKPKLQMHEVI 236


>ref|XP_011093300.1| PREDICTED: transcription factor TFIIIB component B''-like isoform
           X1 [Sesamum indicum] gi|747091161|ref|XP_011093301.1|
           PREDICTED: transcription factor TFIIIB component
           B''-like isoform X1 [Sesamum indicum]
           gi|747091163|ref|XP_011093302.1| PREDICTED:
           transcription factor TFIIIB component B''-like isoform
           X1 [Sesamum indicum] gi|747091165|ref|XP_011093303.1|
           PREDICTED: transcription factor TFIIIB component
           B''-like isoform X1 [Sesamum indicum]
           gi|747091167|ref|XP_011093304.1| PREDICTED:
           transcription factor TFIIIB component B''-like isoform
           X1 [Sesamum indicum]
          Length = 678

 Score = 54.3 bits (129), Expect(2) = 3e-07
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +2

Query: 383 PAFPRD-VLDLSAVGFTCAIPTESMPELLVNEDPIDLMETYQLDSGFLGDHPEVVPEMPA 559
           P F +D VLDLS++GFT  +PTE+  EL +NE+ ++L E  QLDSG   + P   PE+PA
Sbjct: 242 PTFQQDDVLDLSSLGFTHTLPTEASSELPLNEESMNLTEMTQLDSGIPLECP---PEIPA 298

Query: 560 ELVN 571
           +L +
Sbjct: 299 KLAS 302



 Score = 27.7 bits (60), Expect(2) = 3e-07
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +1

Query: 226 RSGKFQPKPKIQV 264
           R+GKFQPKPK+Q+
Sbjct: 199 RTGKFQPKPKLQM 211


>ref|XP_011093305.1| PREDICTED: transcription factor TFIIIB component B''-like isoform
           X2 [Sesamum indicum]
          Length = 675

 Score = 54.3 bits (129), Expect(2) = 3e-07
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +2

Query: 383 PAFPRD-VLDLSAVGFTCAIPTESMPELLVNEDPIDLMETYQLDSGFLGDHPEVVPEMPA 559
           P F +D VLDLS++GFT  +PTE+  EL +NE+ ++L E  QLDSG   + P   PE+PA
Sbjct: 239 PTFQQDDVLDLSSLGFTHTLPTEASSELPLNEESMNLTEMTQLDSGIPLECP---PEIPA 295

Query: 560 ELVN 571
           +L +
Sbjct: 296 KLAS 299



 Score = 27.7 bits (60), Expect(2) = 3e-07
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +1

Query: 226 RSGKFQPKPKIQV 264
           R+GKFQPKPK+Q+
Sbjct: 196 RTGKFQPKPKLQM 208


>ref|XP_011093307.1| PREDICTED: transcription factor TFIIIB component B''-like isoform
           X3 [Sesamum indicum]
          Length = 648

 Score = 54.3 bits (129), Expect(2) = 3e-07
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +2

Query: 383 PAFPRD-VLDLSAVGFTCAIPTESMPELLVNEDPIDLMETYQLDSGFLGDHPEVVPEMPA 559
           P F +D VLDLS++GFT  +PTE+  EL +NE+ ++L E  QLDSG   + P   PE+PA
Sbjct: 212 PTFQQDDVLDLSSLGFTHTLPTEASSELPLNEESMNLTEMTQLDSGIPLECP---PEIPA 268

Query: 560 ELVN 571
           +L +
Sbjct: 269 KLAS 272



 Score = 27.7 bits (60), Expect(2) = 3e-07
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +1

Query: 226 RSGKFQPKPKIQV 264
           R+GKFQPKPK+Q+
Sbjct: 169 RTGKFQPKPKLQM 181


Top