BLASTX nr result
ID: Forsythia21_contig00023065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00023065
(205 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABG74742.1| YCF4 protein [Forsythia europaea] 70 5e-10
gb|ABG74812.1| YCF4 protein [Jasminum subhumile] 69 9e-10
gb|ABG74845.1| YCF4 protein [Menodora longiflora] 68 2e-09
ref|YP_004376432.1| Ycf4 protein [Olea europaea subsp. europaea]... 68 3e-09
gb|AJS14432.1| photosystem I assembly protein ycf4 [Ruellia bree... 67 4e-09
ref|YP_009117232.1| photosystem I assembly protein ycf4 (chlorop... 67 4e-09
gb|ADD30766.1| photosystem I assembly protein ycf4 (chloroplast)... 67 4e-09
ref|YP_008815948.1| photosystem I assembly protein Ycf4 (chlorop... 67 4e-09
ref|YP_008592499.1| photosystem I assembly protein Ycf4 (chlorop... 67 4e-09
ref|YP_007353926.1| photosystem I assembly protein Ycf4 (chlorop... 67 4e-09
gb|ABG74786.1| YCF4 protein [Jasminum abyssinicum] 67 5e-09
gb|ABG74759.1| YCF4 protein [Jasminum leratii] 67 5e-09
ref|YP_778491.1| photosystem I assembly protein Ycf4 [Jasminum n... 67 5e-09
ref|YP_004940521.1| ycf4 gene product (chloroplast) [Boea hygrom... 67 6e-09
ref|YP_538859.1| photosystem I assembly protein Ycf4 [Solanum bu... 66 8e-09
gb|AHH30452.1| photosystem I assembly protein ycf4 (chloroplast)... 66 1e-08
gb|AFV61824.1| photosystem I assembly protein ycf4 (chloroplast)... 66 1e-08
ref|YP_007507122.1| photosystem I assembly protein Ycf4 (chlorop... 66 1e-08
emb|CDP55025.1| photosystem I assembly related protein Ycf4 [Sta... 60 1e-08
ref|NP_054510.1| photosystem I assembly protein Ycf4 [Nicotiana ... 65 1e-08
>gb|ABG74742.1| YCF4 protein [Forsythia europaea]
Length = 184
Score = 70.1 bits (170), Expect = 5e-10
Identities = 35/51 (68%), Positives = 35/51 (68%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSEDIWIELITGSRKLSNFCWA SYLGRNLISF
Sbjct: 1 MSWRSEDIWIELITGSRKLSNFCWALILFLGSLGFLLVGTSSYLGRNLISF 51
>gb|ABG74812.1| YCF4 protein [Jasminum subhumile]
Length = 184
Score = 69.3 bits (168), Expect = 9e-10
Identities = 34/51 (66%), Positives = 35/51 (68%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSEDIWIEL+TGSRKLSNFCWA SYLGRNLISF
Sbjct: 1 MSWRSEDIWIELLTGSRKLSNFCWALILFLGSLGFLLVGTSSYLGRNLISF 51
>gb|ABG74845.1| YCF4 protein [Menodora longiflora]
Length = 184
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/51 (64%), Positives = 35/51 (68%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSEDIWIEL+TGSRKLSNFCWA SYLG+NLISF
Sbjct: 1 MSWRSEDIWIELLTGSRKLSNFCWALILFLGSLGFLLVGISSYLGKNLISF 51
>ref|YP_004376432.1| Ycf4 protein [Olea europaea subsp. europaea]
gi|334700293|ref|YP_004563792.1| Ycf4 protein [Olea
europaea subsp. cuspidata]
gi|334701630|ref|YP_004564015.1| Ycf4 protein [Olea
woodiana subsp. woodiana]
gi|334701899|ref|YP_004564508.1| Ycf4 protein [Olea
europaea subsp. maroccana]
gi|365823322|ref|YP_003359370.2| Ycf4 (chloroplast)
[Olea europaea] gi|731971842|ref|YP_009110613.1| Ycf4
protein (chloroplast) [Hesperelaea palmeri]
gi|291059264|gb|ADD72100.1| photosystem I assembly
protein ycf4 [Olea europaea]
gi|328795444|emb|CBR30326.1| Ycf4 protein [Olea europaea
subsp. europaea] gi|334084412|emb|CBR23841.1| Ycf4
protein [Olea europaea subsp. cuspidata]
gi|334084498|emb|CBR24633.1| Ycf4 protein [Olea europaea
subsp. europaea] gi|334084584|emb|CBR30417.1| Ycf4
protein [Olea europaea subsp. europaea]
gi|334084670|emb|CBS29362.1| Ycf4 protein [Olea woodiana
subsp. woodiana] gi|334084875|emb|CBS29253.1| Ycf4
protein [Olea europaea subsp. maroccana]
gi|334084961|emb|CBJ04309.1| Ycf4 protein [Olea europaea
subsp. cuspidata] gi|334085047|emb|CBR23750.1| Ycf4
protein [Olea europaea subsp. cuspidata]
gi|363413087|gb|ADA69937.2| Ycf4 (chloroplast) [Olea
europaea] gi|510934415|emb|CCQ09113.1| Ycf4 protein
(chloroplast) [Olea europaea subsp. europaea]
gi|725798297|emb|CED79773.1| Ycf4 protein (chloroplast)
[Hesperelaea palmeri]
Length = 184
Score = 67.8 bits (164), Expect = 3e-09
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSEDIWIELITGSRKLSN CWA SYLGRNLISF
Sbjct: 1 MSWRSEDIWIELITGSRKLSNLCWALILFLGSLGFLLVGTSSYLGRNLISF 51
>gb|AJS14432.1| photosystem I assembly protein ycf4 [Ruellia breedlovei]
Length = 184
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSE IWIELITGSRKLSNFCWA SYLGRNLISF
Sbjct: 1 MSWRSEHIWIELITGSRKLSNFCWALIVFLGSLGFLLAGTSSYLGRNLISF 51
>ref|YP_009117232.1| photosystem I assembly protein ycf4 (chloroplast) [Premna
microphylla] gi|748013915|gb|AJE28385.1| photosystem I
assembly protein ycf4 (chloroplast) [Premna microphylla]
Length = 184
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSE IWIELITGSRKLSNFCWA SYLGRNLISF
Sbjct: 1 MSWRSEHIWIELITGSRKLSNFCWALIVFLGSLGFLLVGTSSYLGRNLISF 51
>gb|ADD30766.1| photosystem I assembly protein ycf4 (chloroplast) [Antirrhinum
majus]
Length = 184
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSE IWIELITGSRKLSNFCWA SYLGRNLISF
Sbjct: 1 MSWRSEHIWIELITGSRKLSNFCWALIVFLGSLGFLLVGTSSYLGRNLISF 51
>ref|YP_008815948.1| photosystem I assembly protein Ycf4 (chloroplast) [Lindenbergia
philippensis] gi|557136874|emb|CDI43929.1| photosystem I
assembly protein Ycf4 (chloroplast) [Lindenbergia
philippensis]
Length = 184
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSE IWIELITGSRKLSNFCWA SYLGRNLISF
Sbjct: 1 MSWRSEHIWIELITGSRKLSNFCWALIVFLGSLGFLLVGISSYLGRNLISF 51
>ref|YP_008592499.1| photosystem I assembly protein Ycf4 (chloroplast) [Andrographis
paniculata] gi|532164847|gb|AGT79857.1| photosystem I
assembly protein Ycf4 (chloroplast) [Andrographis
paniculata]
Length = 184
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSE IWIELITGSRKLSNFCWA SYLGRNLISF
Sbjct: 1 MSWRSEHIWIELITGSRKLSNFCWALIVFLGSLGFLLAGTASYLGRNLISF 51
>ref|YP_007353926.1| photosystem I assembly protein Ycf4 (chloroplast) [Tectona grandis]
gi|438687615|emb|CCP47141.1| photosystem I assembly
protein Ycf4 (chloroplast) [Tectona grandis]
gi|438688299|emb|CCP47230.1| photosystem I assembly
protein Ycf4 (chloroplast) [Tectona grandis]
gi|438688423|emb|CCP47319.1| photosystem I assembly
protein Ycf4 (chloroplast) [Tectona grandis]
Length = 184
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSE IWIELITGSRKLSNFCWA SYLGRNLISF
Sbjct: 1 MSWRSEHIWIELITGSRKLSNFCWALIVFLGSLGFLLVGTSSYLGRNLISF 51
>gb|ABG74786.1| YCF4 protein [Jasminum abyssinicum]
Length = 184
Score = 67.0 bits (162), Expect = 5e-09
Identities = 33/51 (64%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSEDIWIEL+TGSRKLSNFCWA SYLGRN ISF
Sbjct: 1 MSWRSEDIWIELLTGSRKLSNFCWALILFLGSLGFLLVGTSSYLGRNWISF 51
>gb|ABG74759.1| YCF4 protein [Jasminum leratii]
Length = 184
Score = 67.0 bits (162), Expect = 5e-09
Identities = 33/51 (64%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSEDIWIEL+TGSRKLSNFCWA SYLGRN ISF
Sbjct: 1 MSWRSEDIWIELLTGSRKLSNFCWALILFLGSLGFLLVGTSSYLGRNWISF 51
>ref|YP_778491.1| photosystem I assembly protein Ycf4 [Jasminum nudiflorum]
gi|122164972|sp|Q06RD0.1|YCF4_JASNU RecName:
Full=Photosystem I assembly protein Ycf4 (chloroplast)
[Jasminum nudiflorum] gi|110456224|gb|ABG74629.1| YCF4
protein [Jasminum nudiflorum]
Length = 184
Score = 67.0 bits (162), Expect = 5e-09
Identities = 33/51 (64%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSEDIWIEL+TGSRKLSNFCWA SYLGRN ISF
Sbjct: 1 MSWRSEDIWIELLTGSRKLSNFCWALILFLGSLGFLLVGTSSYLGRNWISF 51
>ref|YP_004940521.1| ycf4 gene product (chloroplast) [Boea hygrometrica]
gi|340549418|gb|AEK53240.1| photosystem I assembly
protein ycf4 (chloroplast) [Boea hygrometrica]
Length = 184
Score = 66.6 bits (161), Expect = 6e-09
Identities = 33/51 (64%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSE IWIEL+TGSRKLSNFCWA SYLGRNLISF
Sbjct: 1 MSWRSEHIWIELLTGSRKLSNFCWALIVFLGSLGFLLVGTSSYLGRNLISF 51
>ref|YP_538859.1| photosystem I assembly protein Ycf4 [Solanum bulbocastanum]
gi|108773141|ref|YP_635650.1| photosystem I assembly
protein Ycf4 [Solanum tuberosum]
gi|544163624|ref|YP_008563099.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum lycopersicum]
gi|813424028|ref|YP_009131723.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum cheesmaniae]
gi|813424133|ref|YP_009131972.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum habrochaites]
gi|813424278|ref|YP_009132055.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum neorickii]
gi|813559419|ref|YP_009131806.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum chilense]
gi|813559503|ref|YP_009131889.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum galapagense]
gi|813559587|ref|YP_009132138.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum peruvianum]
gi|813559671|ref|YP_009132221.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum pimpinellifolium]
gi|544170682|ref|AP_004939.1| photosystem I assembly
protein Ycf4 (chloroplast) [Solanum lycopersicum]
gi|122201779|sp|Q2MI89.1|YCF4_SOLLC RecName:
Full=Photosystem I assembly protein Ycf4
gi|122201821|sp|Q2MIH6.1|YCF4_SOLBU RecName:
Full=Photosystem I assembly protein Ycf4 (chloroplast)
[Solanum bulbocastanum]
gi|122209887|sp|Q2VEG6.1|YCF4_SOLTU RecName:
Full=Photosystem I assembly protein Ycf4
gi|82754638|gb|ABB90052.1| photosystem I assembly
protein Yc4 [Solanum tuberosum]
gi|84371906|gb|ABC56224.1| photosystem I assembly
protein ycf4 [Solanum bulbocastanum]
gi|84371994|gb|ABC56311.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum lycopersicum]
gi|88656815|gb|ABD47068.1| photosystem I assembly
protein ycf4 [Solanum tuberosum]
gi|89241682|emb|CAJ32404.1| photosystem I assembly
protein Ycf4 [Solanum lycopersicum]
gi|329124593|gb|AEB72150.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum tuberosum]
gi|329124680|gb|AEB72236.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum tuberosum]
gi|757813358|gb|AJO25123.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum lycopersicum]
gi|779776228|gb|AJY78702.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum cheesmaniae]
gi|779776317|gb|AJY78785.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum chilense]
gi|779776407|gb|AJY78868.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum galapagense]
gi|779776498|gb|AJY78951.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum habrochaites]
gi|779776588|gb|AJY79034.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum lycopersicum]
gi|779776679|gb|AJY79117.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum neorickii]
gi|779776769|gb|AJY79200.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum peruvianum]
gi|779776859|gb|AJY79283.1| photosystem I assembly
protein ycf4 (chloroplast) [Solanum pimpinellifolium]
Length = 184
Score = 66.2 bits (160), Expect = 8e-09
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
M+WRS+DIWIELITGSRK+SNFCWA SYLGRNL+SF
Sbjct: 1 MTWRSDDIWIELITGSRKISNFCWALILFLGSLGFLLVGTSSYLGRNLLSF 51
>gb|AHH30452.1| photosystem I assembly protein ycf4 (chloroplast) [Bartsia
inaequalis]
Length = 184
Score = 65.9 bits (159), Expect = 1e-08
Identities = 33/51 (64%), Positives = 33/51 (64%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSE IWIELITGSRKLSNFCWA SY GRNLISF
Sbjct: 1 MSWRSEHIWIELITGSRKLSNFCWAFIVFLGSLGFLLVGTSSYFGRNLISF 51
>gb|AFV61824.1| photosystem I assembly protein ycf4 (chloroplast) [Origanum vulgare
subsp. vulgare]
Length = 184
Score = 65.9 bits (159), Expect = 1e-08
Identities = 33/51 (64%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSE IWIELITGSRKLSNFCWA S+LGRNLISF
Sbjct: 1 MSWRSEHIWIELITGSRKLSNFCWALIVFLGSLGFLLVGTSSFLGRNLISF 51
>ref|YP_007507122.1| photosystem I assembly protein Ycf4 (chloroplast) [Salvia
miltiorrhiza] gi|836643411|ref|YP_009144525.1|
photosystem I assembly protein ycf4 (chloroplast)
[Rosmarinus officinalis] gi|401879753|gb|AFQ30940.1|
photosystem I assembly protein Ycf4 (chloroplast)
[Salvia miltiorrhiza] gi|573461962|emb|CCQ71631.1|
photosystem I assembly protein Ycf4 (chloroplast)
[Salvia miltiorrhiza] gi|827345171|gb|AKJ76755.1|
photosystem I assembly protein ycf4 (chloroplast)
[Rosmarinus officinalis]
Length = 184
Score = 65.9 bits (159), Expect = 1e-08
Identities = 33/51 (64%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
MSWRSE IWIELITGSRKLSNFCWA S+LGRNLISF
Sbjct: 1 MSWRSEHIWIELITGSRKLSNFCWALIVFLGSLGFLLVGTSSFLGRNLISF 51
>emb|CDP55025.1| photosystem I assembly related protein Ycf4 [Staphylococcus aureus
subsp. aureus]
Length = 250
Score = 60.1 bits (144), Expect(2) = 1e-08
Identities = 30/50 (60%), Positives = 30/50 (60%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLIS 5
MSWRSE IWIE I GSRK SNFCWA SYLGRNLIS
Sbjct: 31 MSWRSESIWIEFIVGSRKTSNFCWAFILFFGSLGFLLVGTSSYLGRNLIS 80
Score = 25.4 bits (54), Expect(2) = 1e-08
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 195 GYSFNSNKMQSDQV 154
GYS NSNKMQ D V
Sbjct: 16 GYSLNSNKMQLDLV 29
>ref|NP_054510.1| photosystem I assembly protein Ycf4 [Nicotiana tabacum]
gi|78102547|ref|YP_358688.1| photosystem I assembly
protein Ycf4 [Nicotiana sylvestris]
gi|140292|sp|P12207.1|YCF4_TOBAC RecName:
Full=Photosystem I assembly protein Ycf4 (chloroplast)
[Nicotiana tabacum] gi|122213554|sp|Q3C1J0.1|YCF4_NICSY
RecName: Full=Photosystem I assembly protein Ycf4
(chloroplast) [Nicotiana sylvestris]
gi|11843|emb|CAA77363.1| hypothetical protein [Nicotiana
tabacum] gi|77799574|dbj|BAE46663.1| hypothetical
protein [Nicotiana sylvestris] gi|225211|prf||1211235AR
ORF 184
Length = 184
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/51 (62%), Positives = 34/51 (66%)
Frame = -1
Query: 154 MSWRSEDIWIELITGSRKLSNFCWAXXXXXXXXXXXXXXXXSYLGRNLISF 2
M+WRSE IWIELITGSRK+SNFCWA SYLGRNLISF
Sbjct: 1 MTWRSEHIWIELITGSRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISF 51