BLASTX nr result
ID: Forsythia21_contig00023060
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00023060
(403 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group] 139 6e-31
gb|AAX95047.1| retrotransposon protein, putative, Ty1-copia sub-... 137 3e-30
gb|ABG22406.1| retrotransposon protein, putative, Ty1-copia subc... 137 3e-30
gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subc... 137 3e-30
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 137 3e-30
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 137 4e-30
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc... 137 4e-30
gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subc... 137 4e-30
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group] 137 4e-30
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group] 137 4e-30
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group] 137 4e-30
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group] 137 4e-30
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc... 137 4e-30
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group] 137 4e-30
gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group] 137 4e-30
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group] 137 4e-30
emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group] 137 4e-30
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni... 137 4e-30
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-... 137 4e-30
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja... 137 4e-30
>gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1256
Score = 139 bits (351), Expect = 6e-31
Identities = 64/129 (49%), Positives = 96/129 (74%)
Frame = -2
Query: 402 AAISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKA 223
AA+SW S +QTI++RST+E++L+ALDT AEWLRDLL+D+P++ KP+PAI ++CD +
Sbjct: 1127 AAVSWRSCKQTILTRSTMEAELMALDTATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQT 1186
Query: 222 VIELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDE 43
VI VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D
Sbjct: 1187 VIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDN 1246
Query: 42 SSRGMGLSP 16
+S+ MGL P
Sbjct: 1247 ASKEMGLRP 1255
>gb|AAX95047.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 2266
Score = 137 bits (345), Expect = 3e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 677 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTV 736
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 737 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 796
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 797 SKEMGLRP 804
>gb|ABG22406.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2188
Score = 137 bits (345), Expect = 3e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 599 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTV 658
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 659 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 718
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 719 SKEMGLRP 726
>gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1284
Score = 137 bits (345), Expect = 3e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1069 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPIVEKPVPAIVMNCDNQTV 1128
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1129 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1188
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1189 SKEMGLRP 1196
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 137 bits (345), Expect = 3e-30
Identities = 68/134 (50%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A++W S RQTII+RST+ES+ +AL+ + AEWL++ L +IPL KP P++S+HCDC++
Sbjct: 1152 AVTWRSARQTIIARSTMESEFVALEMAGSEAEWLKNFLANIPLGMKPTPSVSMHCDCQSA 1211
Query: 219 IELV-NQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDE 43
I + N+S++ K NRHIQ RH +K LLK IS+++V+SE++LAD LTK L +K + E
Sbjct: 1212 IAIAKNKSYNGK--NRHIQLRHNLVKQLLKSGTISIDYVKSERDLADPLTKPLGRKMILE 1269
Query: 42 SSRGMGLSPQGSHQ 1
+SRGMGL P + Q
Sbjct: 1270 TSRGMGLKPLANKQ 1283
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1234 IVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1294 SKEMGLRP 1301
>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1369 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1428
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1429 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1488
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1489 SKEMGLRP 1496
>gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1166
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 95/128 (74%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1038 AVSWRSCKQTILTRSTMEAELTALDTATIEAEWLRDLLMDLPIVEKPVPAILMNCDNQTV 1097
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I V+ S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1098 IVKVDSSKDNMKSSRHVKKRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1157
Query: 39 SRGMGLSP 16
S+ MGLSP
Sbjct: 1158 SKEMGLSP 1165
>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
Length = 1342
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1294 SKEMGLRP 1301
>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1294 SKEMGLRP 1301
>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
Length = 1314
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1146 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1205
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1206 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1265
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1266 SKEMGLRP 1273
>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
Length = 1319
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1294 SKEMGLRP 1301
>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1390 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1449
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1450 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1509
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1510 SKEMGLRP 1517
>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1391
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1263 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1322
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1323 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1382
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1383 SKEMGLRP 1390
>gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1229
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1101 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1160
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1161 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1220
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1221 SKEMGLRP 1228
>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
Length = 1302
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1294 SKEMGLRP 1301
>emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]
Length = 1264
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1136 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1195
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1196 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1255
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1256 SKEMGLRP 1263
>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
Length = 1302
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1294 SKEMGLRP 1301
>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1302
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1294 SKEMGLRP 1301
>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 137 bits (344), Expect = 4e-30
Identities = 63/128 (49%), Positives = 94/128 (73%)
Frame = -2
Query: 399 AISWGSKRQTIISRSTLESKLIALDTTCTNAEWLRDLLLDIPLINKPIPAISIHCDCKAV 220
A+SW S +QTI++RST+E++L ALDT AEWLRDLL+D+P++ KP+PAI ++CD + V
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 219 IELVNQSHSNKKVNRHIQARHKSIKALLKRSVISLNFVRSEKNLADDLTKGLHKKGVDES 40
I VN S N K +RH++ R KS++ L VI+L+++++ +NLAD TKGL + +D +
Sbjct: 1234 IVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 39 SRGMGLSP 16
S+ MGL P
Sbjct: 1294 SKEMGLRP 1301