BLASTX nr result

ID: Forsythia21_contig00022171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00022171
         (1130 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012844810.1| PREDICTED: RNA-binding protein 25 isoform X4...    72   1e-09
ref|XP_010320582.1| PREDICTED: RNA-binding protein 25 isoform X2...    62   8e-07
emb|CDP00173.1| unnamed protein product [Coffea canephora]             62   8e-07
ref|XP_004238672.1| PREDICTED: RNA-binding protein 25 isoform X1...    62   8e-07
ref|XP_010320583.1| PREDICTED: RNA-binding protein 25 isoform X3...    61   2e-06
ref|XP_011021628.1| PREDICTED: RNA-binding protein 25-like isofo...    60   3e-06

>ref|XP_012844810.1| PREDICTED: RNA-binding protein 25 isoform X4 [Erythranthe guttatus]
          Length = 832

 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 37/81 (45%), Positives = 45/81 (55%)
 Frame = -3

Query: 243 VLFCEHALTNLHRCLCSLYAGVLRYPSXXXXXXXXXXXXXPLGAVGVIPPMLRPPVAGIR 64
           + F  H L N+HR  C LYAGVLRYPS             PL  +GV+P + RPP  G+R
Sbjct: 36  IYFLWHTLDNMHRFFCPLYAGVLRYPSPYASMIRPSFPPRPL--IGVMPLLARPPGVGVR 93

Query: 63  GPITSPMIRPPAVPSVTSTEK 1
           GPI  P+  P A+P V   EK
Sbjct: 94  GPIIPPVAMPTAIPGVVPAEK 114


>ref|XP_010320582.1| PREDICTED: RNA-binding protein 25 isoform X2 [Solanum lycopersicum]
          Length = 931

 Score = 62.0 bits (149), Expect = 8e-07
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = -3

Query: 192 LYAGVLRYPSXXXXXXXXXXXXXPLGAVGVIPPMLRPPVAGIRGPITSPMIRPPAVPSVT 13
           ++ G+ RY S             PLGAVG+IPP++RPP+  +R PI  P+ RP A+PS+T
Sbjct: 161 IHPGIPRYASPYTQMARPVFPPRPLGAVGIIPPLMRPPIPMMRPPIIPPVARPAAIPSIT 220

Query: 12  STEK 1
            TEK
Sbjct: 221 QTEK 224


>emb|CDP00173.1| unnamed protein product [Coffea canephora]
          Length = 978

 Score = 62.0 bits (149), Expect = 8e-07
 Identities = 32/61 (52%), Positives = 37/61 (60%)
 Frame = -3

Query: 183 GVLRYPSXXXXXXXXXXXXXPLGAVGVIPPMLRPPVAGIRGPITSPMIRPPAVPSVTSTE 4
           G+LRYPS             PL A GVIPP+ RPP+AG R PI   ++RP  VPSV STE
Sbjct: 190 GILRYPSPFAPMARPAYPTRPLAAGGVIPPLPRPPIAGPRAPIIPAVVRPAVVPSVASTE 249

Query: 3   K 1
           K
Sbjct: 250 K 250


>ref|XP_004238672.1| PREDICTED: RNA-binding protein 25 isoform X1 [Solanum lycopersicum]
          Length = 938

 Score = 62.0 bits (149), Expect = 8e-07
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = -3

Query: 192 LYAGVLRYPSXXXXXXXXXXXXXPLGAVGVIPPMLRPPVAGIRGPITSPMIRPPAVPSVT 13
           ++ G+ RY S             PLGAVG+IPP++RPP+  +R PI  P+ RP A+PS+T
Sbjct: 161 IHPGIPRYASPYTQMARPVFPPRPLGAVGIIPPLMRPPIPMMRPPIIPPVARPAAIPSIT 220

Query: 12  STEK 1
            TEK
Sbjct: 221 QTEK 224


>ref|XP_010320583.1| PREDICTED: RNA-binding protein 25 isoform X3 [Solanum lycopersicum]
           gi|723696877|ref|XP_010320584.1| PREDICTED: RNA-binding
           protein 25 isoform X3 [Solanum lycopersicum]
           gi|723696880|ref|XP_010320585.1| PREDICTED: RNA-binding
           protein 25 isoform X3 [Solanum lycopersicum]
          Length = 780

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 29/61 (47%), Positives = 38/61 (62%)
 Frame = -3

Query: 183 GVLRYPSXXXXXXXXXXXXXPLGAVGVIPPMLRPPVAGIRGPITSPMIRPPAVPSVTSTE 4
           G+ RY S             PLGAVG+IPP++RPP+  +R PI  P+ RP A+PS+T TE
Sbjct: 6   GIPRYASPYTQMARPVFPPRPLGAVGIIPPLMRPPIPMMRPPIIPPVARPAAIPSITQTE 65

Query: 3   K 1
           K
Sbjct: 66  K 66


>ref|XP_011021628.1| PREDICTED: RNA-binding protein 25-like isoform X2 [Populus
           euphratica] gi|743822197|ref|XP_011021629.1| PREDICTED:
           RNA-binding protein 25-like isoform X2 [Populus
           euphratica] gi|743822199|ref|XP_011021630.1| PREDICTED:
           RNA-binding protein 25-like isoform X2 [Populus
           euphratica]
          Length = 803

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = -3

Query: 213 LHRCLCSLYAGVLRYPSXXXXXXXXXXXXXPLGAVGVIPPMLRPPVAGIRG--PITSPMI 40
           LHRCL S++AG++RYPS             P GA+ V+P + RP V GI G  P+  P+I
Sbjct: 3   LHRCLFSIFAGIMRYPSPYPAVVRPLFPPRPPGALSVVPAVPRPLVPGIPGVRPVMYPII 62

Query: 39  RPPAVPSVTSTEK 1
           R P +PSVT  EK
Sbjct: 63  R-PVIPSVTPAEK 74


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