BLASTX nr result
ID: Forsythia21_contig00013566
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00013566
(1293 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011079860.1| PREDICTED: ribosome-recycling factor, chloro... 360 1e-96
ref|XP_010255993.1| PREDICTED: ribosome-recycling factor, chloro... 345 6e-92
ref|XP_007050597.1| Ribosome recycling factor isoform 1 [Theobro... 338 5e-90
ref|XP_009367642.1| PREDICTED: ribosome-recycling factor, chloro... 332 3e-88
ref|XP_009367671.1| PREDICTED: ribosome-recycling factor, chloro... 331 6e-88
ref|XP_008235289.1| PREDICTED: ribosome-recycling factor, chloro... 329 2e-87
ref|XP_007050598.1| Ribosome recycling factor isoform 2 [Theobro... 325 5e-86
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides] 323 2e-85
ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloro... 322 5e-85
ref|XP_002302112.2| Ribosome recycling factor family protein [Po... 322 5e-85
ref|XP_011026168.1| PREDICTED: ribosome-recycling factor, chloro... 321 7e-85
ref|XP_009622014.1| PREDICTED: ribosome-recycling factor, chloro... 320 2e-84
ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloro... 320 2e-84
ref|XP_010935178.1| PREDICTED: ribosome-recycling factor, chloro... 319 3e-84
ref|XP_008350057.1| PREDICTED: ribosome-recycling factor, chloro... 319 3e-84
ref|XP_010651961.1| PREDICTED: ribosome-recycling factor, chloro... 318 6e-84
gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea] 318 6e-84
ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citr... 317 1e-83
ref|XP_012490571.1| PREDICTED: ribosome-recycling factor, chloro... 317 1e-83
sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, ... 314 8e-83
>ref|XP_011079860.1| PREDICTED: ribosome-recycling factor, chloroplastic [Sesamum indicum]
Length = 265
Score = 360 bits (925), Expect = 1e-96
Identities = 193/270 (71%), Positives = 222/270 (82%), Gaps = 5/270 (1%)
Frame = -3
Query: 1093 MATAFTPATHIRC-----NSPRIIPSFVPGSNSKYVKVVSWNAASNYVKLQVGQGGFSGE 929
MAT F+P +HIR +SPR SF PGS + V SW+A++NYVKL+V GFS +
Sbjct: 1 MATTFSPVSHIRSICYASDSPRTRLSF-PGSGN----VGSWSASANYVKLRVAARGFSVK 55
Query: 928 PLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAKGRMEKTIETLKSNFMSVRTGRANPA 749
LVV++PW KR + RC T+EEIEAEKS+IEKD K RMEKTIE ++S+F S+RTGRANPA
Sbjct: 56 QLVVKQPWKKRMGVFRCATIEEIEAEKSMIEKDVKERMEKTIENVRSSFNSIRTGRANPA 115
Query: 748 MLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSLKAIEKAIVSSDLGLTPNNDG 569
+LDKV+V+YYGTPV LKSIAQISTPDA SL+VQPYDKSSLKAIEKAIVSS+LGLTPNNDG
Sbjct: 116 ILDKVEVDYYGTPVILKSIAQISTPDAGSLLVQPYDKSSLKAIEKAIVSSNLGLTPNNDG 175
Query: 568 DVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDAIXXXXXXXXXXXXXEDNVKD 389
+VIRLTLPQLTSERRKE+SKIVAKQAEEGKVAIRNIRRDAI EDNVKD
Sbjct: 176 EVIRLTLPQLTSERRKELSKIVAKQAEEGKVAIRNIRRDAIKAYEKLEKEKKLSEDNVKD 235
Query: 388 FSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
S+DLQKVTDEYMKK+DS++KQKEKELLTV
Sbjct: 236 LSSDLQKVTDEYMKKIDSIYKQKEKELLTV 265
>ref|XP_010255993.1| PREDICTED: ribosome-recycling factor, chloroplastic [Nelumbo
nucifera]
Length = 280
Score = 345 bits (884), Expect = 6e-92
Identities = 177/238 (74%), Positives = 203/238 (85%)
Frame = -3
Query: 1012 SKYVKVVSWNAASNYVKLQVGQGGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKSLIEK 833
S V SW++A+NYV LQVG FSG+P+VV+ KRA +LRC T+EEIEAEKSLIEK
Sbjct: 43 STCTNVASWSSAANYVSLQVGTRKFSGKPIVVKLSEQKRAGVLRCATIEEIEAEKSLIEK 102
Query: 832 DAKGRMEKTIETLKSNFMSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMV 653
D K RMEKTIET++ NF +VRTGRANPAMLD+V+VEYYGTPVSLKSIAQISTPDASSL++
Sbjct: 103 DVKQRMEKTIETVRGNFNAVRTGRANPAMLDRVEVEYYGTPVSLKSIAQISTPDASSLLI 162
Query: 652 QPYDKSSLKAIEKAIVSSDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVA 473
QPYDKSSLK IEKAIV+SDLGLTPNNDG+VIRL++PQLTS+RRKE+ KIVAKQAEEGKVA
Sbjct: 163 QPYDKSSLKVIEKAIVNSDLGLTPNNDGEVIRLSVPQLTSDRRKELLKIVAKQAEEGKVA 222
Query: 472 IRNIRRDAIXXXXXXXXXXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
+RNIRRDAI EDNVKD S+DLQKVTDEYMKK+DS++KQKEKELLTV
Sbjct: 223 LRNIRRDAIKSYEKLEKEKKLSEDNVKDLSSDLQKVTDEYMKKIDSVYKQKEKELLTV 280
>ref|XP_007050597.1| Ribosome recycling factor isoform 1 [Theobroma cacao]
gi|508702858|gb|EOX94754.1| Ribosome recycling factor
isoform 1 [Theobroma cacao]
Length = 277
Score = 338 bits (867), Expect = 5e-90
Identities = 173/235 (73%), Positives = 203/235 (86%)
Frame = -3
Query: 1003 VKVVSWNAASNYVKLQVGQGGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAK 824
V V SW++A+NY +L+ G SG+P VV + KRA +LRC T+EEIEAEKS IEKDAK
Sbjct: 46 VNVYSWSSAANYARLRHGASKLSGKPFVVLR---KRAGVLRCATIEEIEAEKSSIEKDAK 102
Query: 823 GRMEKTIETLKSNFMSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPY 644
RMEKTIET+++NF S+RTGRANPA+LDKV+VEYYGTPVSLKSIAQISTPD+SSL+VQPY
Sbjct: 103 ARMEKTIETVRTNFNSIRTGRANPAILDKVEVEYYGTPVSLKSIAQISTPDSSSLLVQPY 162
Query: 643 DKSSLKAIEKAIVSSDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRN 464
DKSSLKAIEKAIV+SDLG+TPNNDG+VIRL+LPQLT+ERRKE+SK+VAKQAEEGKVA+RN
Sbjct: 163 DKSSLKAIEKAIVNSDLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAKQAEEGKVAVRN 222
Query: 463 IRRDAIXXXXXXXXXXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
IRRDA+ EDNVKD S+DLQK+TDEYMKK+DS+FKQKEKELLTV
Sbjct: 223 IRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIFKQKEKELLTV 277
>ref|XP_009367642.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Pyrus x
bretschneideri]
Length = 281
Score = 332 bits (852), Expect = 3e-88
Identities = 182/281 (64%), Positives = 219/281 (77%), Gaps = 16/281 (5%)
Frame = -3
Query: 1093 MATAFTPATHIRC------NSPRII----PSFVPGSNSKY-----VKVVSWNAASNYVKL 959
MAT F+PAT +R N P+ + SF GS K V V SW++++NYV+
Sbjct: 1 MATHFSPATPVRFVLQPKQNPPKTLLSIRDSFGGGSACKKCQPRTVNVCSWSSSANYVRS 60
Query: 958 QVGQGGFSGEPLVVRKP-WMKRASILRCGTMEEIEAEKSLIEKDAKGRMEKTIETLKSNF 782
Q G SG +VV+K + KRA I+R T+EEIEAEKSLI+KDA+GRMEKT+ET++SNF
Sbjct: 61 QDGAARLSGNAIVVKKQLFQKRAGIVRAATIEEIEAEKSLIKKDAEGRMEKTLETVRSNF 120
Query: 781 MSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSLKAIEKAIVS 602
S+RTGRA+PAMLDK++VEYYG+PV LK+IA IS+PDASS +VQPYDKSSLKAIEKAIVS
Sbjct: 121 NSIRTGRASPAMLDKIEVEYYGSPVGLKTIANISSPDASSFLVQPYDKSSLKAIEKAIVS 180
Query: 601 SDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDAIXXXXXXXX 422
SDLGLTPNNDG+VIRLTLPQLTSERRKE+SKIVAKQ EEGKVA+RNIRRDA+
Sbjct: 181 SDLGLTPNNDGEVIRLTLPQLTSERRKELSKIVAKQTEEGKVALRNIRRDALKTLEKLEK 240
Query: 421 XXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
EDNVKD S+DLQK+TDEY+KK+D++FKQKEKELL V
Sbjct: 241 AKKLSEDNVKDLSSDLQKLTDEYVKKLDAIFKQKEKELLKV 281
>ref|XP_009367671.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Pyrus x
bretschneideri] gi|694383421|ref|XP_009367672.1|
PREDICTED: ribosome-recycling factor, chloroplastic-like
[Pyrus x bretschneideri]
Length = 341
Score = 331 bits (849), Expect = 6e-88
Identities = 181/281 (64%), Positives = 219/281 (77%), Gaps = 16/281 (5%)
Frame = -3
Query: 1093 MATAFTPATHIRC------NSPRII----PSFVPGSNSKY-----VKVVSWNAASNYVKL 959
MAT F+PAT +R N P+ + SF GS K V V SW++++NYV+
Sbjct: 61 MATHFSPATPVRFVLQPKQNPPKTLLSIRDSFGGGSACKKCQPRTVNVCSWSSSANYVRS 120
Query: 958 QVGQGGFSGEPLVVRKP-WMKRASILRCGTMEEIEAEKSLIEKDAKGRMEKTIETLKSNF 782
Q G SG +VV+K + KRA I+R T+EEIEAEKSLI+KDA+GRME+T+ET++SNF
Sbjct: 121 QDGAARLSGNAIVVKKQLFQKRAGIVRAATIEEIEAEKSLIKKDAEGRMERTLETVRSNF 180
Query: 781 MSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSLKAIEKAIVS 602
S+RTGRA+PAMLDK++VEYYG+PV LK+IA IS+PDASS +VQPYDKSSLKAIEKAIVS
Sbjct: 181 NSIRTGRASPAMLDKIEVEYYGSPVGLKTIANISSPDASSFLVQPYDKSSLKAIEKAIVS 240
Query: 601 SDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDAIXXXXXXXX 422
SDLGLTPNNDG+VIRLTLPQLTSERRKE+SKIVAKQ EEGKVA+RNIRRDA+
Sbjct: 241 SDLGLTPNNDGEVIRLTLPQLTSERRKELSKIVAKQTEEGKVALRNIRRDALKTLEKLEK 300
Query: 421 XXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
EDNVKD S+DLQK+TDEY+KK+D++FKQKEKELL V
Sbjct: 301 AKKLSEDNVKDLSSDLQKLTDEYVKKLDAIFKQKEKELLKV 341
>ref|XP_008235289.1| PREDICTED: ribosome-recycling factor, chloroplastic [Prunus mume]
Length = 281
Score = 329 bits (844), Expect = 2e-87
Identities = 182/281 (64%), Positives = 218/281 (77%), Gaps = 16/281 (5%)
Frame = -3
Query: 1093 MATAFTPATHIRC------NSPRIIPS----FVPGSNSKY-----VKVVSWNAASNYVKL 959
MAT F+PAT +R N P+ + S F G K V V SW++A +YV
Sbjct: 1 MATHFSPATPVRFFLQPTQNPPKTLLSVRDPFGGGPVCKKCQPITVNVCSWSSAVSYVGS 60
Query: 958 QVGQGGFSGEPLVVRKPWM-KRASILRCGTMEEIEAEKSLIEKDAKGRMEKTIETLKSNF 782
Q G FSG P+VV+K ++ KRA +R T+EEIEAEKSLI+KDAKGRMEKTIE ++SNF
Sbjct: 61 QDGSMKFSGNPIVVKKQFLQKRAGTVRAATIEEIEAEKSLIKKDAKGRMEKTIELVRSNF 120
Query: 781 MSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSLKAIEKAIVS 602
S+RTGRA+PAMLDK++VEYYG+PV LK+IAQIS+PDASS +VQPYDKSSLKAIEKAIVS
Sbjct: 121 NSIRTGRASPAMLDKIEVEYYGSPVGLKTIAQISSPDASSFLVQPYDKSSLKAIEKAIVS 180
Query: 601 SDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDAIXXXXXXXX 422
SDLGLTPNNDG+VIRLTLPQLT+ERRKE+SK+VAKQ EEGKVA+RNIRRDA+
Sbjct: 181 SDLGLTPNNDGEVIRLTLPQLTAERRKELSKVVAKQTEEGKVALRNIRRDALKALDKLEK 240
Query: 421 XXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
EDNVKD S+DLQK+TDEY+KK+D++FKQKEKELL V
Sbjct: 241 DKKLSEDNVKDLSSDLQKLTDEYVKKLDTVFKQKEKELLKV 281
>ref|XP_007050598.1| Ribosome recycling factor isoform 2 [Theobroma cacao]
gi|508702859|gb|EOX94755.1| Ribosome recycling factor
isoform 2 [Theobroma cacao]
Length = 300
Score = 325 bits (833), Expect = 5e-86
Identities = 173/258 (67%), Positives = 203/258 (78%), Gaps = 23/258 (8%)
Frame = -3
Query: 1003 VKVVSWNAASNYVKLQVGQGGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAK 824
V V SW++A+NY +L+ G SG+P VV + KRA +LRC T+EEIEAEKS IEKDAK
Sbjct: 46 VNVYSWSSAANYARLRHGASKLSGKPFVVLR---KRAGVLRCATIEEIEAEKSSIEKDAK 102
Query: 823 GRMEKTIETLKSNFMSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPY 644
RMEKTIET+++NF S+RTGRANPA+LDKV+VEYYGTPVSLKSIAQISTPD+SSL+VQPY
Sbjct: 103 ARMEKTIETVRTNFNSIRTGRANPAILDKVEVEYYGTPVSLKSIAQISTPDSSSLLVQPY 162
Query: 643 DKSSLKAIEKAIVSSDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRN 464
DKSSLKAIEKAIV+SDLG+TPNNDG+VIRL+LPQLT+ERRKE+SK+VAKQAEEGKVA+RN
Sbjct: 163 DKSSLKAIEKAIVNSDLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAKQAEEGKVAVRN 222
Query: 463 IRRDAIXXXXXXXXXXXXXEDNVKDFSNDL-----------------------QKVTDEY 353
IRRDA+ EDNVKD S+DL QK+TDEY
Sbjct: 223 IRRDALKAYEKLEKEKKLSEDNVKDLSSDLQISQLGGLQIPLSTQVCEIFSFMQKLTDEY 282
Query: 352 MKKVDSLFKQKEKELLTV 299
MKK+DS+FKQKEKELLTV
Sbjct: 283 MKKIDSIFKQKEKELLTV 300
>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 286
Score = 323 bits (827), Expect = 2e-85
Identities = 168/242 (69%), Positives = 201/242 (83%), Gaps = 1/242 (0%)
Frame = -3
Query: 1021 GSNSKYVKVVS-WNAASNYVKLQVGQGGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKS 845
G NS VS W++++NY L+ G SG+P+ V++ R ++R T+EEIEAEKS
Sbjct: 45 GYNSIGAASVSLWSSSANYSSLRNGSSKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKS 104
Query: 844 LIEKDAKGRMEKTIETLKSNFMSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDAS 665
LIE DAKGRMEKTI+T+++NF SVRTGRANP+MLDK++VEYYGTPVSLKSIAQISTPDAS
Sbjct: 105 LIEDDAKGRMEKTIDTMRTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDAS 164
Query: 664 SLMVQPYDKSSLKAIEKAIVSSDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEE 485
SL+VQPYDKSSLKAIEKAIVSSDLGLTPNNDG+VIR+++PQLTSERRKE+SK+VAK AEE
Sbjct: 165 SLLVQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEE 224
Query: 484 GKVAIRNIRRDAIXXXXXXXXXXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELL 305
GKVA+RNIRRDA+ EDNVKD S+DLQK+TDEYMKK+D++FKQKEKELL
Sbjct: 225 GKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELL 284
Query: 304 TV 299
V
Sbjct: 285 KV 286
>ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
tuberosum]
Length = 267
Score = 322 bits (824), Expect = 5e-85
Identities = 167/233 (71%), Positives = 197/233 (84%)
Frame = -3
Query: 997 VVSWNAASNYVKLQVGQGGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAKGR 818
VV W+A++NY L VG +PLV + W KR+ I+RC T+EEIEAEKS IEKD K R
Sbjct: 38 VVCWSASANYSSLWVGARRL--QPLV-KPSWGKRSGIVRCATIEEIEAEKSSIEKDVKER 94
Query: 817 MEKTIETLKSNFMSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDK 638
MEKT+ET++SNF S+RTGRA+PAMLDK++V+YYGTPVSLKSIAQISTPDASS++VQPYDK
Sbjct: 95 MEKTVETVRSNFNSIRTGRASPAMLDKIEVDYYGTPVSLKSIAQISTPDASSILVQPYDK 154
Query: 637 SSLKAIEKAIVSSDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIR 458
SSLKAIEKAIVSSD+G+TPNNDG+VIRL +PQLTS+RRKE+SKIV+KQAEEGKVAIRNIR
Sbjct: 155 SSLKAIEKAIVSSDVGMTPNNDGEVIRLAVPQLTSDRRKELSKIVSKQAEEGKVAIRNIR 214
Query: 457 RDAIXXXXXXXXXXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
RDA+ EDNVKD S+DLQKVTDEYMKK+D++FKQKEKELL V
Sbjct: 215 RDALKAYEKLEKEKKLSEDNVKDLSSDLQKVTDEYMKKIDTVFKQKEKELLKV 267
>ref|XP_002302112.2| Ribosome recycling factor family protein [Populus trichocarpa]
gi|550344331|gb|EEE81385.2| Ribosome recycling factor
family protein [Populus trichocarpa]
Length = 286
Score = 322 bits (824), Expect = 5e-85
Identities = 163/230 (70%), Positives = 196/230 (85%)
Frame = -3
Query: 988 WNAASNYVKLQVGQGGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAKGRMEK 809
W++++NY L+ G SG+P+ V++ R ++R T+EEIEAEKSLIE DAKGRMEK
Sbjct: 57 WSSSANYSSLRNGSTKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEK 116
Query: 808 TIETLKSNFMSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSL 629
TI+T+++NF SVRTGRANP+MLDK++VEYYGTPVSLKSIAQISTPDASSL+VQPYDKSSL
Sbjct: 117 TIDTMRANFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSL 176
Query: 628 KAIEKAIVSSDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDA 449
KAIEKAIVSSDLGLTPNNDG+VIR+++PQLTSERRKE+SK+VAK AEEGKVA+RNIRRDA
Sbjct: 177 KAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDA 236
Query: 448 IXXXXXXXXXXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
+ EDNVKD S+DLQK+TDEYMKK+D++FKQKEKELL V
Sbjct: 237 LKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286
>ref|XP_011026168.1| PREDICTED: ribosome-recycling factor, chloroplastic [Populus
euphratica]
Length = 286
Score = 321 bits (823), Expect = 7e-85
Identities = 167/242 (69%), Positives = 200/242 (82%), Gaps = 1/242 (0%)
Frame = -3
Query: 1021 GSNSKYVKVVS-WNAASNYVKLQVGQGGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKS 845
G NS VS W++++NY L+ G SG+P+ ++ R ++R T+EEIEAEKS
Sbjct: 45 GYNSIGATSVSLWSSSANYSSLRNGSTKLSGKPVAAKRLLQNRRGVVRNATIEEIEAEKS 104
Query: 844 LIEKDAKGRMEKTIETLKSNFMSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDAS 665
LIE DAKGRMEKTI+T+++NF SVRTGRANP+MLDK++VEYYGTPVSLKSIAQISTPDAS
Sbjct: 105 LIEDDAKGRMEKTIDTMRANFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDAS 164
Query: 664 SLMVQPYDKSSLKAIEKAIVSSDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEE 485
SL+VQPYDKSSLKAIEKAIVSSDLGLTPNNDG+VIR+++PQLTSERRKE+SK+VAK AEE
Sbjct: 165 SLLVQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEE 224
Query: 484 GKVAIRNIRRDAIXXXXXXXXXXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELL 305
GKVA+RNIRRDA+ EDNVKD S+DLQK+TDEYMKK+D++FKQKEKELL
Sbjct: 225 GKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKIDNIFKQKEKELL 284
Query: 304 TV 299
V
Sbjct: 285 KV 286
>ref|XP_009622014.1| PREDICTED: ribosome-recycling factor, chloroplastic [Nicotiana
tomentosiformis]
Length = 265
Score = 320 bits (819), Expect = 2e-84
Identities = 170/270 (62%), Positives = 209/270 (77%), Gaps = 5/270 (1%)
Frame = -3
Query: 1093 MATAFTPATHIRC-----NSPRIIPSFVPGSNSKYVKVVSWNAASNYVKLQVGQGGFSGE 929
M AF+PAT +R N P+ + F + VVS A++NYV L+VG
Sbjct: 1 MTIAFSPATPVRSLYQKPNPPKPLLFFQDDFRTSG-NVVSLTASANYVSLRVGARSLQP- 58
Query: 928 PLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAKGRMEKTIETLKSNFMSVRTGRANPA 749
V+ W+KR +RC T+E+IEAEK+ IEKD K RMEKTI+ ++SNF S+RTGRA+PA
Sbjct: 59 ---VKLSWVKRRGTVRCATIEQIEAEKAAIEKDVKERMEKTIDNVRSNFNSIRTGRASPA 115
Query: 748 MLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSLKAIEKAIVSSDLGLTPNNDG 569
MLDK++V+YYGTPVSLKSIAQISTPD+SS++VQPYDKSSLKAIEKAIVSSDLG+TPNNDG
Sbjct: 116 MLDKIEVDYYGTPVSLKSIAQISTPDSSSILVQPYDKSSLKAIEKAIVSSDLGMTPNNDG 175
Query: 568 DVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDAIXXXXXXXXXXXXXEDNVKD 389
+VIR+++PQLTS+RRKE+SKIV+KQAEEGKVA+RNIRRDA+ EDNVKD
Sbjct: 176 EVIRMSVPQLTSDRRKELSKIVSKQAEEGKVALRNIRRDALKAYEKLEKEKKLSEDNVKD 235
Query: 388 FSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
S DLQKVTDEYMKK+D++FKQKEKE+LTV
Sbjct: 236 LSGDLQKVTDEYMKKIDTVFKQKEKEMLTV 265
>ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloroplastic [Solanum
lycopersicum]
Length = 267
Score = 320 bits (819), Expect = 2e-84
Identities = 174/270 (64%), Positives = 208/270 (77%), Gaps = 5/270 (1%)
Frame = -3
Query: 1093 MATAFTPATHIR--CNSPRIIPSFVPGSNSKYV---KVVSWNAASNYVKLQVGQGGFSGE 929
M A +PAT +R C + K+ VV W+A++NY L VG +
Sbjct: 1 MTIALSPATPVRLLCQQQLTRKPVLFCFQDKFPTSGNVVCWSASANYSSLWVGARRL--Q 58
Query: 928 PLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAKGRMEKTIETLKSNFMSVRTGRANPA 749
PLV + W KR+ I+RC T+EEIEAEKS IEKD K RMEKT+ET++SNF S+RTGRA+PA
Sbjct: 59 PLV-KPSWGKRSGIVRCATIEEIEAEKSSIEKDVKERMEKTVETVRSNFNSIRTGRASPA 117
Query: 748 MLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSLKAIEKAIVSSDLGLTPNNDG 569
MLDK++V+YYGTPVSLKSIAQISTPDA+S++VQPYDKSSLKAIEKAIVSSD+G+TPNNDG
Sbjct: 118 MLDKIEVDYYGTPVSLKSIAQISTPDATSILVQPYDKSSLKAIEKAIVSSDVGMTPNNDG 177
Query: 568 DVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDAIXXXXXXXXXXXXXEDNVKD 389
+VIRL +PQLTS+RRKE+SKIV+KQAEEGKVAIRNIRRDA+ EDNVKD
Sbjct: 178 EVIRLAVPQLTSDRRKELSKIVSKQAEEGKVAIRNIRRDALKAYEKLEKEKKLSEDNVKD 237
Query: 388 FSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
S+DLQKVTDEYMKK+D +FKQKEKELL V
Sbjct: 238 LSSDLQKVTDEYMKKIDIVFKQKEKELLKV 267
>ref|XP_010935178.1| PREDICTED: ribosome-recycling factor, chloroplastic isoform X2
[Elaeis guineensis]
Length = 270
Score = 319 bits (818), Expect = 3e-84
Identities = 177/271 (65%), Positives = 210/271 (77%), Gaps = 3/271 (1%)
Frame = -3
Query: 1102 PYTMATA---FTPATHIRCNSPRIIPSFVPGSNSKYVKVVSWNAASNYVKLQVGQGGFSG 932
P++ ATA TP++ + + S PG+ + SW++ +NYV+LQVG FS
Sbjct: 5 PFSSATATRRLTPSSLLLASRTGNNHSGCPGT---CMNKFSWSSTANYVRLQVGSA-FSS 60
Query: 931 EPLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAKGRMEKTIETLKSNFMSVRTGRANP 752
L K KRA +LRC T+EEIEAEKS+IEK AK +MEKTIET++ NF +VRTGRANP
Sbjct: 61 RHLAT-KLIKKRAGVLRCATIEEIEAEKSVIEKGAKEKMEKTIETVRGNFNAVRTGRANP 119
Query: 751 AMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSLKAIEKAIVSSDLGLTPNND 572
AMLD+V+VEYYG+PVSLKSIAQISTPD SL+VQPYDKS LKAIEKAIV+SD+GLTPNND
Sbjct: 120 AMLDRVEVEYYGSPVSLKSIAQISTPDGRSLLVQPYDKSCLKAIEKAIVNSDIGLTPNND 179
Query: 571 GDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDAIXXXXXXXXXXXXXEDNVK 392
G+VIRL++PQLTSERRKE+SK+VAK AEEGKVAIRNIRRDAI EDNVK
Sbjct: 180 GEVIRLSIPQLTSERRKELSKVVAKLAEEGKVAIRNIRRDAIKAYEKLEKEKKLSEDNVK 239
Query: 391 DFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
D S+DLQKVTDEYMKK+DS+ KQKEKELLTV
Sbjct: 240 DLSSDLQKVTDEYMKKIDSIQKQKEKELLTV 270
>ref|XP_008350057.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Malus
domestica]
Length = 281
Score = 319 bits (818), Expect = 3e-84
Identities = 175/281 (62%), Positives = 215/281 (76%), Gaps = 16/281 (5%)
Frame = -3
Query: 1093 MATAFTPATHIRC------NSPRII----PSFVPGSNSKY-----VKVVSWNAASNYVKL 959
MAT F+PAT +R N P+ + SF G K V V W+++++YV+
Sbjct: 1 MATHFSPATPVRFVLQPKQNPPKTLLSIRDSFGGGPACKKCQPRTVNVCPWSSSASYVRS 60
Query: 958 QVGQGGFSGEPLVVRKP-WMKRASILRCGTMEEIEAEKSLIEKDAKGRMEKTIETLKSNF 782
Q SG +VV+K + RA I+R T+EEIEAEKSLI+K+A+GRMEKT+ET++SNF
Sbjct: 61 QDSAAKLSGNAIVVKKQLFQNRAGIVRAATIEEIEAEKSLIKKEAEGRMEKTLETVRSNF 120
Query: 781 MSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSLKAIEKAIVS 602
S+RTGRA+PAMLDK++VEYYG+PV LK+IA IS+P+ASS +VQPYDKSSLKAIEKAIVS
Sbjct: 121 NSIRTGRASPAMLDKIEVEYYGSPVGLKTIANISSPEASSFLVQPYDKSSLKAIEKAIVS 180
Query: 601 SDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDAIXXXXXXXX 422
SDLGLTPNNDG+VIRLTLPQLTSERRKE+SKIVAKQ EEGKVA+RNIRRDA+
Sbjct: 181 SDLGLTPNNDGEVIRLTLPQLTSERRKELSKIVAKQTEEGKVALRNIRRDALKTLEKLEK 240
Query: 421 XXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
EDNVKD S+DLQK+TDEY+KK+D++FKQKEKELL V
Sbjct: 241 AKKLSEDNVKDLSSDLQKLTDEYVKKLDAIFKQKEKELLKV 281
>ref|XP_010651961.1| PREDICTED: ribosome-recycling factor, chloroplastic [Vitis vinifera]
gi|296085196|emb|CBI28691.3| unnamed protein product
[Vitis vinifera]
Length = 274
Score = 318 bits (815), Expect = 6e-84
Identities = 173/276 (62%), Positives = 208/276 (75%), Gaps = 11/276 (3%)
Frame = -3
Query: 1093 MATAFTPATHIRCNSPRIIPSFVPGS----NSKYVK-------VVSWNAASNYVKLQVGQ 947
MA F+PAT +R R S PG Y K + +A+NYV+L G
Sbjct: 1 MAMTFSPATPVRTIFQR--KSLSPGGCYCRGPGYEKCHLNIGIAFTLRSAANYVRLGDGA 58
Query: 946 GGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAKGRMEKTIETLKSNFMSVRT 767
+SG+ V ++ + KR I RC T+EEIEAEKS IEKD K RMEKTIET+++NF S+RT
Sbjct: 59 REYSGKLFVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIRT 118
Query: 766 GRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSLKAIEKAIVSSDLGL 587
GRANPA+LD+V+VEYYGTPVSLKSIAQISTPD++SL+VQPYDKSSLK IEKAIVSSDLGL
Sbjct: 119 GRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIVSSDLGL 178
Query: 586 TPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDAIXXXXXXXXXXXXX 407
TPNNDG+VIRL+LPQLTSERRKE+SK+VAKQ EEGKVA+RNIRRDA+
Sbjct: 179 TPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLEKDKKLS 238
Query: 406 EDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
EDNVKD S+DLQK+ DEYMKK+++++KQKEKELL V
Sbjct: 239 EDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 274
>gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea]
Length = 278
Score = 318 bits (815), Expect = 6e-84
Identities = 176/279 (63%), Positives = 213/279 (76%), Gaps = 14/279 (5%)
Frame = -3
Query: 1093 MATAFTPATHIRCNSPRIIPSFVP------------GSNSKYVKVVSWNAASNYVKLQVG 950
MAT+F+P + I P P GSNS VK SW ++S+YV L++
Sbjct: 1 MATSFSPTPTLPSVRSSIFPQNPPKPLLSLPEFFRGGSNSSCVKR-SWASSSSYVTLKLS 59
Query: 949 QG-GFSGEPLVVRKPWM-KRASILRCGTMEEIEAEKSLIEKDAKGRMEKTIETLKSNFMS 776
S PL+ + + +R I+R T+EEIEAEK+ IEKD K RME++IE++++NF S
Sbjct: 60 NAFRVSARPLLSKGTLLHRRMGIVRAATIEEIEAEKAAIEKDVKIRMERSIESVRANFNS 119
Query: 775 VRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSLKAIEKAIVSSD 596
+RTGRANPAMLDK++VEYYG+PVSLKSIAQISTPDASSL+VQPYDKSSLKAIEKAIVSSD
Sbjct: 120 IRTGRANPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSD 179
Query: 595 LGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDAIXXXXXXXXXX 416
+G+TPNNDG+VIRLTLPQLTSERRKE+SK+VAKQAEEGKVA+RNIRRDA+
Sbjct: 180 VGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVALRNIRRDALKAYEKLEKEK 239
Query: 415 XXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
EDNVKD S+DLQK+TDEYMKKVD++FKQKEKELLTV
Sbjct: 240 KLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKELLTV 278
>ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
gi|568852089|ref|XP_006479713.1| PREDICTED:
ribosome-recycling factor, chloroplastic-like [Citrus
sinensis] gi|557546326|gb|ESR57304.1| hypothetical
protein CICLE_v10021605mg [Citrus clementina]
gi|641849847|gb|KDO68721.1| hypothetical protein
CISIN_1g023857mg [Citrus sinensis]
Length = 276
Score = 317 bits (813), Expect = 1e-83
Identities = 162/235 (68%), Positives = 197/235 (83%)
Frame = -3
Query: 1003 VKVVSWNAASNYVKLQVGQGGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAK 824
V V W++A+NY +L S +P+VVR+ KR ++RC T+EEIEAEKS IEKD K
Sbjct: 46 VSVRQWSSAANYSRLVK----LSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVK 101
Query: 823 GRMEKTIETLKSNFMSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPY 644
RME+TI+ +++NF SVRTGR+NPAMLDK++VEYYG+PVSLKSIAQI+TPD+SSL++QPY
Sbjct: 102 ARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPY 161
Query: 643 DKSSLKAIEKAIVSSDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRN 464
DKSSLK+IEKAIVSSDLG+TPNNDG+VIRLTLPQLTSERRKE+SK+VAKQAEEGKVA+RN
Sbjct: 162 DKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRN 221
Query: 463 IRRDAIXXXXXXXXXXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
IRRDA+ EDNVKD S+DLQK+TDEYMKK+DS++KQKEKELL V
Sbjct: 222 IRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQKEKELLKV 276
>ref|XP_012490571.1| PREDICTED: ribosome-recycling factor, chloroplastic isoform X1
[Gossypium raimondii] gi|823188641|ref|XP_012490572.1|
PREDICTED: ribosome-recycling factor, chloroplastic
isoform X2 [Gossypium raimondii]
gi|763774978|gb|KJB42101.1| hypothetical protein
B456_007G137300 [Gossypium raimondii]
Length = 276
Score = 317 bits (812), Expect = 1e-83
Identities = 160/235 (68%), Positives = 197/235 (83%)
Frame = -3
Query: 1003 VKVVSWNAASNYVKLQVGQGGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAK 824
V SW++A+NY ++ SG+ +VV+ KR +++C T+EEIEAEKS IEKD K
Sbjct: 42 VSAHSWSSAANYASIRHVAVKSSGKHVVVKHLLRKRVGLVKCATIEEIEAEKSSIEKDVK 101
Query: 823 GRMEKTIETLKSNFMSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPY 644
RMEKTIET+++NF S+RTGRANP+MLDKV+VEYYGTPVSLKSIAQISTP++SSL++QP+
Sbjct: 102 ERMEKTIETVRANFNSIRTGRANPSMLDKVEVEYYGTPVSLKSIAQISTPESSSLLIQPF 161
Query: 643 DKSSLKAIEKAIVSSDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRN 464
DKSSLKAIEKAIV+SDLG+TPNNDG+VIRL+LPQLT+ERRKE+SK+VAKQAEEGKVA+RN
Sbjct: 162 DKSSLKAIEKAIVNSDLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAKQAEEGKVAVRN 221
Query: 463 IRRDAIXXXXXXXXXXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
IRRDA+ EDNVKD S+DLQK+TDEYMKK+D ++KQKEKELLTV
Sbjct: 222 IRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKIDGIYKQKEKELLTV 276
>sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=Nuclear located protein D2; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor, partial [Daucus carota]
Length = 227
Score = 314 bits (805), Expect = 8e-83
Identities = 162/230 (70%), Positives = 192/230 (83%)
Frame = -3
Query: 988 WNAASNYVKLQVGQGGFSGEPLVVRKPWMKRASILRCGTMEEIEAEKSLIEKDAKGRMEK 809
W AA+NYVK++VG G F+ + +V+ + KR L+C TMEEIEAEKSLIEK K RMEK
Sbjct: 1 WTAAANYVKIKVGTGKFARKTVVLSQ---KRTGTLKCATMEEIEAEKSLIEKSVKERMEK 57
Query: 808 TIETLKSNFMSVRTGRANPAMLDKVQVEYYGTPVSLKSIAQISTPDASSLMVQPYDKSSL 629
TIE +K++F S+RT R+NP MLDK++VEYYGTP SLKSIAQISTPD+SSL+V PYDKSSL
Sbjct: 58 TIENVKASFNSIRTXRSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLLVNPYDKSSL 117
Query: 628 KAIEKAIVSSDLGLTPNNDGDVIRLTLPQLTSERRKEMSKIVAKQAEEGKVAIRNIRRDA 449
K IEKAIV+SDLG+TPNNDGDVIRL++PQLT++RRKE+SKIVAKQAEEGKVA+RNIRRDA
Sbjct: 118 KDIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVALRNIRRDA 177
Query: 448 IXXXXXXXXXXXXXEDNVKDFSNDLQKVTDEYMKKVDSLFKQKEKELLTV 299
I EDNVKD S+DLQKV DEY+KKVDS+FKQKEKEL+TV
Sbjct: 178 IKSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIFKQKEKELMTV 227