BLASTX nr result

ID: Forsythia21_contig00010534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00010534
         (469 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085947.1| PREDICTED: ribonuclease E/G-like protein, ch...    62   2e-07
ref|XP_011085945.1| PREDICTED: ribonuclease E/G-like protein, ch...    62   2e-07
ref|XP_011085944.1| PREDICTED: ribonuclease E/G-like protein, ch...    61   3e-07
ref|XP_010657495.1| PREDICTED: ribonuclease E/G-like protein, ch...    60   7e-07
ref|XP_010657494.1| PREDICTED: ribonuclease E/G-like protein, ch...    60   7e-07
ref|XP_010657493.1| PREDICTED: ribonuclease E/G-like protein, ch...    60   7e-07
emb|CBI28473.3| unnamed protein product [Vitis vinifera]               60   7e-07
ref|XP_012089614.1| PREDICTED: ribonuclease E/G-like protein, ch...    48   4e-06
ref|XP_012089616.1| PREDICTED: ribonuclease E/G-like protein, ch...    48   4e-06

>ref|XP_011085947.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X3
           [Sesamum indicum]
          Length = 933

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = -3

Query: 272 RHAMGEIRCNCFIKEDMWTSSNVLWRPKLEFFISSH-PHHGKRNIKSVVKDSWIRSHTRR 96
           +  M EI+  C +KE MWTSS+ + RP  +F +  H P+   RN     + + +RS TRR
Sbjct: 7   KDGMNEIKVKCSVKEGMWTSSDAMRRPIFQFSMLPHSPYQQYRN-----RMAKLRSRTRR 61

Query: 95  RPAAQISQSWMGKNSLQLFISAPYGDEEKMV 3
           RP  ++  SWMG  + ++ +     DE K+V
Sbjct: 62  RPIPRLFHSWMGNRTQRVLVQDLLRDEGKIV 92


>ref|XP_011085945.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X2
           [Sesamum indicum]
          Length = 934

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = -3

Query: 275 RRHAMGEIRCNCFIKEDMWTSSNVLWRPKLEFFISSH-PHHGKRNIKSVVKDSWIRSHTR 99
           +   M EI+  C +KE MWTSS+ + RP  +F +  H P+   RN     + + +RS TR
Sbjct: 7   KEDGMNEIKVKCSVKEGMWTSSDAMRRPIFQFSMLPHSPYQQYRN-----RMAKLRSRTR 61

Query: 98  RRPAAQISQSWMGKNSLQLFISAPYGDEEKMV 3
           RRP  ++  SWMG  + ++ +     DE K+V
Sbjct: 62  RRPIPRLFHSWMGNRTQRVLVQDLLRDEGKIV 93


>ref|XP_011085944.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1
           [Sesamum indicum]
          Length = 953

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = -3

Query: 263 MGEIRCNCFIKEDMWTSSNVLWRPKLEFFISSH-PHHGKRNIKSVVKDSWIRSHTRRRPA 87
           M EI+  C +KE MWTSS+ + RP  +F +  H P+   RN     + + +RS TRRRP 
Sbjct: 30  MNEIKVKCSVKEGMWTSSDAMRRPIFQFSMLPHSPYQQYRN-----RMAKLRSRTRRRPI 84

Query: 86  AQISQSWMGKNSLQLFISAPYGDEEKMV 3
            ++  SWMG  + ++ +     DE K+V
Sbjct: 85  PRLFHSWMGNRTQRVLVQDLLRDEGKIV 112


>ref|XP_010657495.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X3
           [Vitis vinifera]
          Length = 1020

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
 Frame = -3

Query: 245 NCFIKEDMWTSSNVLWRPKLEFFISSHPHHGKRNIKSVVKDSWIRSHTRRRPAAQISQSW 66
           N F+K D W S +++W+P  EF +   P HGK++ K +V+DSW+ S+  RRP+A I  SW
Sbjct: 148 NYFLKGDAWPSCDIIWKPGPEFSLLV-PLHGKQDKKIMVRDSWMTSNA-RRPSAHIWGSW 205

Query: 65  MGKN--SLQLFISAPYGDEEKM 6
           M  +    +  IS P  DE+++
Sbjct: 206 MEDSYFPAEHLISPPSRDEDEI 227


>ref|XP_010657494.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X2
           [Vitis vinifera]
          Length = 1025

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
 Frame = -3

Query: 245 NCFIKEDMWTSSNVLWRPKLEFFISSHPHHGKRNIKSVVKDSWIRSHTRRRPAAQISQSW 66
           N F+K D W S +++W+P  EF +   P HGK++ K +V+DSW+ S+  RRP+A I  SW
Sbjct: 147 NYFLKGDAWPSCDIIWKPGPEFSLLV-PLHGKQDKKIMVRDSWMTSNA-RRPSAHIWGSW 204

Query: 65  MGKN--SLQLFISAPYGDEEKM 6
           M  +    +  IS P  DE+++
Sbjct: 205 MEDSYFPAEHLISPPSRDEDEI 226


>ref|XP_010657493.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1
           [Vitis vinifera]
          Length = 1026

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
 Frame = -3

Query: 245 NCFIKEDMWTSSNVLWRPKLEFFISSHPHHGKRNIKSVVKDSWIRSHTRRRPAAQISQSW 66
           N F+K D W S +++W+P  EF +   P HGK++ K +V+DSW+ S+  RRP+A I  SW
Sbjct: 148 NYFLKGDAWPSCDIIWKPGPEFSLLV-PLHGKQDKKIMVRDSWMTSNA-RRPSAHIWGSW 205

Query: 65  MGKN--SLQLFISAPYGDEEKM 6
           M  +    +  IS P  DE+++
Sbjct: 206 MEDSYFPAEHLISPPSRDEDEI 227


>emb|CBI28473.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
 Frame = -3

Query: 245 NCFIKEDMWTSSNVLWRPKLEFFISSHPHHGKRNIKSVVKDSWIRSHTRRRPAAQISQSW 66
           N F+K D W S +++W+P  EF +   P HGK++ K +V+DSW+ S+  RRP+A I  SW
Sbjct: 147 NYFLKGDAWPSCDIIWKPGPEFSLLV-PLHGKQDKKIMVRDSWMTSNA-RRPSAHIWGSW 204

Query: 65  MGKN--SLQLFISAPYGDEEKM 6
           M  +    +  IS P  DE+++
Sbjct: 205 MEDSYFPAEHLISPPSRDEDEI 226


>ref|XP_012089614.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1
           [Jatropha curcas] gi|643707510|gb|KDP23005.1|
           hypothetical protein JCGZ_01727 [Jatropha curcas]
          Length = 990

 Score = 48.1 bits (113), Expect(2) = 4e-06
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -3

Query: 275 RRHAMGEIRCNCFIKEDMWTSSNVLWRPKLEFFISSHPHHGKRNIKSVVKDSWIRSHTRR 96
           + H+    + N FIKE+   SS+++WRP  EF +S       R I  +V+DSW++ +T  
Sbjct: 149 KMHSGVNFKYNYFIKEESRPSSDIIWRPGPEFSLSVPLTIKDRKI--MVRDSWLKFNT-E 205

Query: 95  RPAAQISQSWMGKN--SLQLFISAPYGDEEKMV 3
           RP   +  SW+G+     Q  +SA   DE + V
Sbjct: 206 RPPPHLWGSWIGEKYPPEQPLVSAQARDEHETV 238



 Score = 28.9 bits (63), Expect(2) = 4e-06
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -2

Query: 351 DPNIVRFW--EMVVLLSTTEHASLRNIEKTRHGG 256
           DPN +  W  EM + +  TEHA+L  IE   H G
Sbjct: 120 DPNSLGGWKPEMALQMCPTEHANLWKIEVKMHSG 153


>ref|XP_012089616.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X3
           [Jatropha curcas]
          Length = 804

 Score = 48.1 bits (113), Expect(2) = 4e-06
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -3

Query: 275 RRHAMGEIRCNCFIKEDMWTSSNVLWRPKLEFFISSHPHHGKRNIKSVVKDSWIRSHTRR 96
           + H+    + N FIKE+   SS+++WRP  EF +S       R I  +V+DSW++ +T  
Sbjct: 149 KMHSGVNFKYNYFIKEESRPSSDIIWRPGPEFSLSVPLTIKDRKI--MVRDSWLKFNT-E 205

Query: 95  RPAAQISQSWMGKN--SLQLFISAPYGDEEKMV 3
           RP   +  SW+G+     Q  +SA   DE + V
Sbjct: 206 RPPPHLWGSWIGEKYPPEQPLVSAQARDEHETV 238



 Score = 28.9 bits (63), Expect(2) = 4e-06
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -2

Query: 351 DPNIVRFW--EMVVLLSTTEHASLRNIEKTRHGG 256
           DPN +  W  EM + +  TEHA+L  IE   H G
Sbjct: 120 DPNSLGGWKPEMALQMCPTEHANLWKIEVKMHSG 153


Top