BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00007965
         (1478 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I sub...   600   e-169
emb|CDP10074.1| unnamed protein product [Coffea canephora]            483   e-133
ref|XP_012834350.1| PREDICTED: DNA-directed RNA polymerase I sub...   458   e-126
ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I sub...   434   e-118
ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I sub...   434   e-118
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   431   e-118
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub...   430   e-117
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   426   e-116
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              421   e-115
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   414   e-113
ref|XP_012073009.1| PREDICTED: DNA-directed RNA polymerase I sub...   410   e-111
ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub...   396   e-107
gb|KHG00372.1| DNA-directed RNA polymerase I subunit rpa[2] [Gos...   395   e-107
ref|XP_011652120.1| PREDICTED: DNA-directed RNA polymerase I sub...   388   e-105
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   385   e-104
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...   385   e-104
ref|XP_008443105.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   378   e-102
ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I sub...   371   e-100
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   358   5e-96
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...   350   2e-93

>ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Sesamum
            indicum]
          Length = 1701

 Score =  600 bits (1547), Expect = e-169
 Identities = 301/435 (69%), Positives = 340/435 (78%)
 Frame = -1

Query: 1310 SATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDENFACKS 1131
            ++TE VEAV+FGFMTDEEVR HSVVKITNPNLLD LEKPI GGLYDPAMGPLDEN  CKS
Sbjct: 2    ASTEVVEAVRFGFMTDEEVRRHSVVKITNPNLLDILEKPIPGGLYDPAMGPLDENSPCKS 61

Query: 1130 CGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENCVTQLEQ 951
            CGQR+YHCPGHCGHI+LVSP YNPLLFN L+NLLNKTCF+CF FR+SR EVENCV+QLE 
Sbjct: 62   CGQRAYHCPGHCGHIELVSPAYNPLLFNTLNNLLNKTCFYCFQFRTSRREVENCVSQLEL 121

Query: 950  IAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHKHSEHNK 771
            I +GDI+GAKRL++RQ +++KK +DWVLSDD+VDPEDS+GSH S +   S    H E N 
Sbjct: 122  IVKGDIVGAKRLSMRQNLQDKKNMDWVLSDDIVDPEDSQGSHTSHSSGISGDQNHYEQNS 181

Query: 770  QGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIRSNAT 591
            Q CWDS Q TEA+ VLNEFL                  KPTFGWFH+SGLS  Q+RSNA 
Sbjct: 182  QACWDSSQLTEAMSVLNEFLKKKGRKCKNCECNNPKLNKPTFGWFHVSGLSDTQLRSNAI 241

Query: 590  RHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKKPMHQAR 411
            R SRL V  + G E++ SSEV+NASD SWK                + KKS KK ++QAR
Sbjct: 242  RRSRLDVAHSGGGEERPSSEVVNASDYSWKDDSETAEANSFIAASDTPKKSSKKGVNQAR 301

Query: 410  NFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGKVTSHSM 231
            N    LE+  N FSGPLLPSEVRDI+RRLWENEAP+CSY+CDIQQQQ    SG V  +SM
Sbjct: 302  N--QGLEETNNYFSGPLLPSEVRDILRRLWENEAPLCSYMCDIQQQQCK-LSGNVAGYSM 358

Query: 230  FFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFINRWM 51
            FFLESILVPPIKFRPPAKGGD+VMEHP T+LLGKVLQSNIALGNAHVN+AERSK INRWM
Sbjct: 359  FFLESILVPPIKFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNNAERSKIINRWM 418

Query: 50   DLQQSINVLYDSKTA 6
            DLQ SINVL+DSKTA
Sbjct: 419  DLQLSINVLFDSKTA 433


>emb|CDP10074.1| unnamed protein product [Coffea canephora]
          Length = 1680

 Score =  483 bits (1242), Expect = e-133
 Identities = 255/443 (57%), Positives = 304/443 (68%), Gaps = 1/443 (0%)
 Frame = -1

Query: 1328 MAQSTES-ATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLD 1152
            MAQ+TE  A+EAVE V F FMT EEVR HSVVKI NP LLDT+ +P+ GGLYDPAMGP D
Sbjct: 1    MAQTTEGGASEAVEKVLFSFMTSEEVRKHSVVKIKNPVLLDTVGRPMPGGLYDPAMGPFD 60

Query: 1151 ENFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVEN 972
            E   CKSCGQRS+HC GHCGHI+LVSP YNPLLFNML+NLL +TCF+CFHFRSS  EV+ 
Sbjct: 61   EQSPCKSCGQRSFHCTGHCGHIELVSPAYNPLLFNMLYNLLQRTCFYCFHFRSSTEEVDK 120

Query: 971  CVTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRH 792
            CV QLE+IA+GD+IGAKR            LD   S DL + EDSEGSH+S   ++   H
Sbjct: 121  CVLQLERIAKGDVIGAKR------------LDAASSADLDNSEDSEGSHVSCGNVY---H 165

Query: 791  KHSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGN 612
               EH KQ  WDS QFTEA+ VLN FL                  KPTFGWFHM  +S  
Sbjct: 166  GAEEHMKQPSWDSFQFTEAMSVLNMFLKPKLSKCGKCEAKNPKIKKPTFGWFHMV-VSNA 224

Query: 611  QIRSNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEK 432
            + R+N  R  RL   ++ G E++SSSEV+NA+D  W+                      K
Sbjct: 225  ETRANIIRGHRLDGFRSGGSEERSSSEVVNANDSLWEDDSQTGKTASYTVSDGIDTPVAK 284

Query: 431  KPMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESG 252
            K  +Q      EL+K   +FS  LLPSEVRD+V+RLWENEAP+CS+ICD+ Q++QH  + 
Sbjct: 285  KSPNQPGRVGEELKKQKEAFSEHLLPSEVRDVVKRLWENEAPLCSFICDL-QREQHNSAA 343

Query: 251  KVTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERS 72
             +  +SMFFL+SILVPPIKFRP A+ GD VMEHPHT LL KVLQSNIALGNA++N+AER 
Sbjct: 344  GIAGYSMFFLDSILVPPIKFRPLARTGDAVMEHPHTNLLSKVLQSNIALGNAYINNAERY 403

Query: 71   KFINRWMDLQQSINVLYDSKTAT 3
            K +NRWMDLQQSI+VLYDSKT T
Sbjct: 404  KIVNRWMDLQQSISVLYDSKTTT 426


>ref|XP_012834350.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Erythranthe
            guttatus] gi|604336035|gb|EYU39881.1| hypothetical
            protein MIMGU_mgv1a000122mg [Erythranthe guttata]
          Length = 1719

 Score =  458 bits (1178), Expect = e-126
 Identities = 246/441 (55%), Positives = 296/441 (67%), Gaps = 2/441 (0%)
 Frame = -1

Query: 1319 STESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDENFA 1140
            STE  TE VEAV+FGF TDEE R HS+VKITNPNL+D L KP  GGLYDPAMG LDE   
Sbjct: 3    STECTTEVVEAVRFGFFTDEEARKHSLVKITNPNLVDILGKPCPGGLYDPAMGSLDERSI 62

Query: 1139 CKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENCVTQ 960
            C+SCGQR+Y C GHCGHI+LVS  YNPLLFN L N+LNKTC +C  F SS  E EN V+Q
Sbjct: 63   CESCGQRAYLCNGHCGHIELVSVAYNPLLFNTLSNILNKTCLYCLQFISSAEETENFVSQ 122

Query: 959  LEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDP-EDSEGSHISDAELHSDRHKHS 783
            LE I +GD+ GAK+L L    + KKK+ +V +DD  D  EDS+GSH+S + + SD   H 
Sbjct: 123  LELIRKGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHF 182

Query: 782  EHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSG-LSGNQI 606
            + ++Q  W S Q  EAI V+NE+L                  KPTFGWF + G  S   I
Sbjct: 183  KDDEQASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAI 242

Query: 605  RSNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKKP 426
            R N  R  +L    + G ED  SSEV+NA D S                  STKKS+KK 
Sbjct: 243  RENVIRSHKLDESDSDGGEDNFSSEVVNAGDHSMNDDSETVESNSFIATSNSTKKSKKKG 302

Query: 425  MHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGKV 246
            +++A+  +     P    SGPLLPS+VRDI++ LWE EA  CSYI DIQ+Q+     G  
Sbjct: 303  VNRAKKLNPGSGDPNFYLSGPLLPSQVRDILKLLWEKEASFCSYISDIQRQKCK-PFGNK 361

Query: 245  TSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKF 66
            T +SMFFLE++LVPPI+FRPPAKGGD+VMEHP T+LLGKVLQSNIALGNAHVN AE+SK 
Sbjct: 362  TGYSMFFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVN-AEKSKI 420

Query: 65   INRWMDLQQSINVLYDSKTAT 3
            I+RWM+LQQSINV +DSKTAT
Sbjct: 421  ISRWMELQQSINVYFDSKTAT 441


>ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
            [Eucalyptus grandis]
          Length = 1669

 Score =  434 bits (1115), Expect = e-118
 Identities = 230/440 (52%), Positives = 288/440 (65%), Gaps = 1/440 (0%)
 Frame = -1

Query: 1319 STESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDENFA 1140
            + E  +E VE+V+FGF+TDEEVR  S VK+TN  LLD +E+P+ GGLYDPAMG L++  A
Sbjct: 3    TVEGVSEFVESVRFGFLTDEEVRKQSCVKVTNTVLLDNVERPVAGGLYDPAMGTLNDTTA 62

Query: 1139 CKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENCVTQ 960
            CKSCGQRS++CPGHCGHIDLVSPVYNPLLFN L+NLL +TCF CFHFR SR +V+ CV++
Sbjct: 63   CKSCGQRSFNCPGHCGHIDLVSPVYNPLLFNTLYNLLKRTCFFCFHFRESRSQVDACVSK 122

Query: 959  LEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSD-RHKHS 783
            LE IA+GD+ GAK L+ +          W  +  L   E S G  +S + + SD +H   
Sbjct: 123  LELIAKGDVAGAKELDSK----------WATNSSL--REASNGGDVSCSTVRSDLQHDSP 170

Query: 782  EHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIR 603
             H KQG W S QF EA+ VLN+FL                  KPTFGWFHMSG++G Q R
Sbjct: 171  VHQKQGEWTSLQFNEAMSVLNKFLKPTYKECKNCKAKNPKISKPTFGWFHMSGMTGAQTR 230

Query: 602  SNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKKPM 423
             N  R +++      G  +  S E     D                      KK +KK  
Sbjct: 231  GNIIRGNKMDGPFLDGDGEMESLEGAFLQDDGGNEAETQSSTFASPDGIGIAKKGQKK-- 288

Query: 422  HQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGKVT 243
             +  + S E  K  N FSGPLLPSEV++I++ LWENEAP+CS+I DIQQQ     SG   
Sbjct: 289  RKGHSLSDEYIKQKNFFSGPLLPSEVKEIMKLLWENEAPLCSFISDIQQQ----GSGNSA 344

Query: 242  SHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFI 63
            +HSMFFL ++LVPPIKFRPP+KGGD+VMEHPHT+LL KVLQ+NI+LGNAH   + R+  I
Sbjct: 345  THSMFFLGTVLVPPIKFRPPSKGGDSVMEHPHTVLLAKVLQANISLGNAH--QSNRATII 402

Query: 62   NRWMDLQQSINVLYDSKTAT 3
            +RWMDLQQSIN+L+DSKTAT
Sbjct: 403  SRWMDLQQSINLLFDSKTAT 422


>ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
            [Eucalyptus grandis]
          Length = 1669

 Score =  434 bits (1115), Expect = e-118
 Identities = 230/440 (52%), Positives = 288/440 (65%), Gaps = 1/440 (0%)
 Frame = -1

Query: 1319 STESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDENFA 1140
            + E  +E VE+V+FGF+TDEEVR  S VK+TN  LLD +E+P+ GGLYDPAMG L++  A
Sbjct: 3    TAEGVSEFVESVRFGFLTDEEVRKQSCVKVTNTVLLDNVERPVAGGLYDPAMGTLNDTTA 62

Query: 1139 CKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENCVTQ 960
            CKSCGQRS++CPGHCGHIDLVSPVYNPLLFN L+NLL +TCF CFHFR SR +V+ CV++
Sbjct: 63   CKSCGQRSFNCPGHCGHIDLVSPVYNPLLFNTLYNLLKRTCFFCFHFRESRSQVDACVSK 122

Query: 959  LEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSD-RHKHS 783
            LE IA+GD+ GAK L+ +          W  +  L   E S G  +S + + SD +H   
Sbjct: 123  LELIAKGDVAGAKELDSK----------WATNSSL--REASNGGDVSCSTVRSDLQHDSP 170

Query: 782  EHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIR 603
             H KQG W S QF EA+ VLN+FL                  KPTFGWFHMSG++G Q R
Sbjct: 171  VHQKQGEWTSLQFNEAMSVLNKFLKPTYKECKNCKAKNPKISKPTFGWFHMSGMTGAQTR 230

Query: 602  SNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKKPM 423
             N  R +++      G  +  S E     D                      KK +KK  
Sbjct: 231  GNIIRGNKMDGPFLDGDGEMESLEGAFLQDDGGNEAETQSSTFASPDGIGIAKKGQKK-- 288

Query: 422  HQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGKVT 243
             +  + S E  K  N FSGPLLPSEV++I++ LWENEAP+CS+I DIQQQ     SG   
Sbjct: 289  RKGHSLSDEYIKQKNFFSGPLLPSEVKEIMKLLWENEAPLCSFISDIQQQ----GSGNSA 344

Query: 242  SHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFI 63
            +HSMFFL ++LVPPIKFRPP+KGGD+VMEHPHT+LL KVLQ+NI+LGNAH   + R+  I
Sbjct: 345  THSMFFLGTVLVPPIKFRPPSKGGDSVMEHPHTVLLAKVLQANISLGNAH--QSNRATII 402

Query: 62   NRWMDLQQSINVLYDSKTAT 3
            +RWMDLQQSIN+L+DSKTAT
Sbjct: 403  SRWMDLQQSINLLFDSKTAT 422


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  431 bits (1109), Expect = e-118
 Identities = 231/438 (52%), Positives = 288/438 (65%), Gaps = 1/438 (0%)
 Frame = -1

Query: 1313 ESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDENFACK 1134
            + A+EAVEAV F FMTDEEVR HSVVK+T+PNLLD L+ P+  GLYDPAMGPLD    CK
Sbjct: 3    QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 1133 SCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENCVTQLE 954
             C Q +  C GHCGHI+LVSPVYNPLLFNMLHNLL +TCF+CFHFR+SR EVE CV++LE
Sbjct: 63   FCCQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 953  QIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHKHSEHN 774
             IA+GD++GAK +            D +  D+  D E+SEGSH+S A    +   H E+N
Sbjct: 121  LIAKGDVVGAKMI------------DALSPDNSTDREESEGSHMSCAMDDLNMQDHREYN 168

Query: 773  KQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIRSNA 594
            K+  WD+ QFTEA+ V++  L                  KP+FG FHM  +S  QIR N 
Sbjct: 169  KRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMD-ISNKQIRENY 227

Query: 593  TRHSR-LGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKKPMHQ 417
                R   +    G E+  S EV+NA++   +                  +K       Q
Sbjct: 228  INSGRRFNLHDTGGSEENPSPEVVNATEPLGEAETSLCVTSTDGVENSKARK------RQ 281

Query: 416  ARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGKVTSH 237
              + S  +E+  +SFS   LPS+VR I+  LWENEAP+C++ CDIQ Q  H  SGKV   
Sbjct: 282  GGDQSDVVEQQKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQH-HNTSGKVAGP 340

Query: 236  SMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFINR 57
            SMFFL+SILVPPIKFRPPAKGGD++MEHPHT+LLGKV+Q+NIALGNAH+N A RSK I+R
Sbjct: 341  SMFFLDSILVPPIKFRPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISR 400

Query: 56   WMDLQQSINVLYDSKTAT 3
             MDLQQS+NVL+DSKTA+
Sbjct: 401  LMDLQQSVNVLFDSKTAS 418


>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
            vinifera]
          Length = 1691

 Score =  430 bits (1106), Expect = e-117
 Identities = 237/449 (52%), Positives = 291/449 (64%), Gaps = 8/449 (1%)
 Frame = -1

Query: 1328 MAQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDE 1149
            MA   E  TE VEAVKF F TDEEVR +S  KIT+P +LD++++P+ GGLYDPA+G +DE
Sbjct: 1    MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 1148 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENC 969
            N  C+SCGQRS++CPGHCGHIDLVS VYNPLLFN+LHNLL KTCF C HF++S   V+  
Sbjct: 61   NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 968  VTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAEL--HSDR 795
            V+QLE I++GD++GA            K LD +   +   PEDS+GSH+S +     S R
Sbjct: 121  VSQLELISKGDVVGA------------KNLDSISPSESSYPEDSDGSHVSCSSTVNSSAR 168

Query: 794  HKHSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSG 615
               S H KQ  W S Q  EA+ V++ FL                  KPTFGWFHM+GLS 
Sbjct: 169  DNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSD 228

Query: 614  NQIRSNATRHSRLGVRQNVGVEDKSSSEVINASDC-SW-----KXXXXXXXXXXXXXXXX 453
             Q R+N  R S+L    +   E+KSSSEV N +D   W                      
Sbjct: 229  AQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDT 288

Query: 452  STKKSEKKPMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQ 273
             TK+ E+K       F     K  + FSGPLLPSEVRDI+ RLWENEA +CS+I DI Q+
Sbjct: 289  VTKRLERKGAQAPIEFI----KQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQE 344

Query: 272  QQHGESGKVTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAH 93
            +  G SG    +SMFFLE+ILVPPIKFRPP+KG  +VMEHP T+LLGKVLQ+NIALGNAH
Sbjct: 345  RL-GASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAH 403

Query: 92   VNSAERSKFINRWMDLQQSINVLYDSKTA 6
             N++ERSK I+RWMDLQQSINVL+D KTA
Sbjct: 404  ANNSERSKIISRWMDLQQSINVLFDGKTA 432


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Solanum
            lycopersicum]
          Length = 1677

 Score =  426 bits (1095), Expect = e-116
 Identities = 227/438 (51%), Positives = 288/438 (65%), Gaps = 1/438 (0%)
 Frame = -1

Query: 1313 ESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDENFACK 1134
            + A+E VEAV F FMTDEEVR HSVVK+T+PNLLD L+ P+  GLYDPAMGPLD    CK
Sbjct: 3    QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 1133 SCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENCVTQLE 954
             C Q +  C GHCGHI+LVSPVYNPLLFNMLHNLL +TCF+CFHFR+SR EVE CV++LE
Sbjct: 63   FCSQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 953  QIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHKHSEHN 774
             IA+GD++GAK +            D +  D+  D E+SEGSH+S      +   H E+N
Sbjct: 121  LIAKGDVVGAKMI------------DALSPDNSTDREESEGSHMSCTMDDLNVRDHCEYN 168

Query: 773  KQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIRSNA 594
            K+  WD+ QFTEA+ V++  L                  KP+FG FHM  +S  QIR N 
Sbjct: 169  KRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMD-ISNKQIRENY 227

Query: 593  TRHSR-LGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKKPMHQ 417
                R   +    G E+  S EV+NA++   +                   ++ K    Q
Sbjct: 228  INSGRRFNLHDTGGSEENPSPEVVNATEPLGEAETSLCVTSTDGV------ENSKGRKRQ 281

Query: 416  ARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGKVTSH 237
              + S  +E+  +SFS   LPS+VR I+  LWENEAP+C++ CDIQ Q ++  SGKV   
Sbjct: 282  GGDQSDVVEQQKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHRN-TSGKVAGP 340

Query: 236  SMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFINR 57
            SMFFL+SILVPP+KFRPPAKGGD++MEHPHT+LLGKV+Q+NIALGNAH+N A RSK I+R
Sbjct: 341  SMFFLDSILVPPVKFRPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKIISR 400

Query: 56   WMDLQQSINVLYDSKTAT 3
             MDLQQS+NVL+DSKTA+
Sbjct: 401  LMDLQQSVNVLFDSKTAS 418


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  421 bits (1083), Expect = e-115
 Identities = 232/443 (52%), Positives = 286/443 (64%), Gaps = 2/443 (0%)
 Frame = -1

Query: 1328 MAQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDE 1149
            MA   E  TE VEAVKF F TDEEVR +S  KIT+P +LD++++P+ GGLYDPA+G +DE
Sbjct: 1    MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 1148 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENC 969
            N  C+SCGQRS++CPGHCGHIDLVS VYNPLLFN+LHNLL KTCF C HF++S   V+  
Sbjct: 61   NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 968  VTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAEL--HSDR 795
            V+QLE I++GD++GA            K LD +   +   PEDS+GSH+S +     S R
Sbjct: 121  VSQLELISKGDVVGA------------KNLDSISPSESSYPEDSDGSHVSCSSTVNSSAR 168

Query: 794  HKHSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSG 615
               S H KQ  W S Q  EA+ V++ FL                  KPTFGWFHM+GLS 
Sbjct: 169  DNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSD 228

Query: 614  NQIRSNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSE 435
             Q R+N  R S+L    N GV+   +   I  +D                     TK+ E
Sbjct: 229  AQTRANVIRGSKLERPLN-GVDTDETHSSIAPTD---------------GIQDTVTKRLE 272

Query: 434  KKPMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGES 255
            +K       F     K  + FSGPLLPSEVRDI+ RLWENEA +CS+I DI Q++  G S
Sbjct: 273  RKGAQAPIEFI----KQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERL-GAS 327

Query: 254  GKVTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAER 75
            G    +SMFFLE+ILVPPIKFRPP+KG  +VMEHP T+LLGKVLQ+NIALGNAH N++ER
Sbjct: 328  GNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSER 387

Query: 74   SKFINRWMDLQQSINVLYDSKTA 6
            SK I+RWMDLQQSINVL+D KTA
Sbjct: 388  SKIISRWMDLQQSINVLFDGKTA 410


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  414 bits (1064), Expect = e-113
 Identities = 224/439 (51%), Positives = 285/439 (64%), Gaps = 2/439 (0%)
 Frame = -1

Query: 1316 TESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDENFAC 1137
            ++ ATE+++++ F F+TDEEVR HS VKITNP LLD +E+P+ GGLYDPA+GPL E   C
Sbjct: 8    SKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTIC 67

Query: 1136 KSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENCVTQL 957
            K+CGQRS +CPGHCGHIDLVSPVYNPLLFN LH LL +TCF CFHFR  RG+VE C+ QL
Sbjct: 68   KTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQL 127

Query: 956  EQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSD-RHKHSE 780
            E I +GDI+GAKR            L+ V   + + PE+S+ SH S   +HS  +    E
Sbjct: 128  ELIVKGDIVGAKR------------LESVSPSEALYPEESDLSHESCPTIHSGVQCNDGE 175

Query: 779  HNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIRS 600
            H +Q  W S QFTEA+ VLN FL                  KPTFGWFH SG+S   IR+
Sbjct: 176  HTRQQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRA 235

Query: 599  NATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKKPMH 420
            N     +LG    +G E + +++V +A++                     TKK +KK   
Sbjct: 236  NVITGHQLG--GLLGSEIEGTTDVEDAAE--------------PGDQHSGTKKHKKKERK 279

Query: 419  QARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGK-VT 243
            +   F+ +     ++FS  LLPSEV++ +  LW+NEA ICS+I D+QQQ    E GK   
Sbjct: 280  EVLEFTRQ----KSTFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQ----EFGKRKA 331

Query: 242  SHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFI 63
              +MFFLE+ILVPPIKFRPP KGGD+VMEHP T+LL KVLQSNI+LG+AH+N  E SK +
Sbjct: 332  GPAMFFLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIV 390

Query: 62   NRWMDLQQSINVLYDSKTA 6
             RW+DLQQSIN L+DSKTA
Sbjct: 391  RRWLDLQQSINTLFDSKTA 409


>ref|XP_012073009.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Jatropha
            curcas]
          Length = 1741

 Score =  410 bits (1053), Expect = e-111
 Identities = 224/448 (50%), Positives = 281/448 (62%), Gaps = 7/448 (1%)
 Frame = -1

Query: 1328 MAQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDE 1149
            M  +TE ATE+++++ F F+TDEEVR HS VKIT+P LLD +++P+ GGLYDPA+GPL E
Sbjct: 1    MTATTEGATESIDSITFSFLTDEEVRKHSFVKITDPRLLDLVDRPVLGGLYDPALGPLSE 60

Query: 1148 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENC 969
               CK+CGQR  +CPGHCGHIDLVSPVYNPLLFN LH LL +TCF+CFHFR  RG+V+ C
Sbjct: 61   GTICKTCGQRLTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFYCFHFRIHRGQVDKC 120

Query: 968  VTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHK 789
            V QLE I +GDI+GAKR            LD VL  + + PE+S+GSH S + +HS    
Sbjct: 121  VKQLELIVKGDIVGAKR------------LDSVLPSETLYPEESDGSHESCSTVHSGAQC 168

Query: 788  HS-EHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGN 612
            H+ EH KQ  W S QF+EA  VLN FL                  KP FGWF+ SG++  
Sbjct: 169  HNGEHMKQKEWTSLQFSEATSVLNTFLMPKFKKCKNCGAVNPNITKPMFGWFYTSGMTDA 228

Query: 611  QIRSNATRHSRLG------VRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXS 450
             IR+N  R  +LG      V +   VE+ +       +D                     
Sbjct: 229  SIRANIIRGRQLGGPLVAEVDEMTDVEESAEPSGNQDTD--------------------- 267

Query: 449  TKKSEKKPMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQ 270
             K+ +KK   +AR F     K  ++FS  LLPSEV+D +  LWENE  ICS+I D+QQQ 
Sbjct: 268  VKRHKKKGSQEAREF----YKQRSAFSKQLLPSEVKDALDLLWENEDRICSFISDLQQQ- 322

Query: 269  QHGESGKVTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHV 90
              G   K    SMFFLE+ILV  IKFRPP KGGD+V EHP T+LL KVL++NI LG+AH+
Sbjct: 323  --GFGKKKAGPSMFFLETILVAAIKFRPPTKGGDSVREHPQTVLLSKVLEANIYLGDAHI 380

Query: 89   NSAERSKFINRWMDLQQSINVLYDSKTA 6
            N  E SK + RWMDLQQSIN+L+DSKTA
Sbjct: 381  NK-EHSKIVRRWMDLQQSINILFDSKTA 407


>ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
            raimondii] gi|763751831|gb|KJB19219.1| hypothetical
            protein B456_003G089300 [Gossypium raimondii]
          Length = 1674

 Score =  396 bits (1017), Expect = e-107
 Identities = 216/442 (48%), Positives = 269/442 (60%), Gaps = 1/442 (0%)
 Frame = -1

Query: 1328 MAQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDE 1149
            MAQ TE AT++V+AV F FMT EEVR HSV+K+TN NLLD + +P+ GGLYDP +GPL++
Sbjct: 1    MAQITEGATDSVDAVWFNFMTTEEVRKHSVLKLTNANLLDFMNRPMPGGLYDPVLGPLED 60

Query: 1148 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENC 969
               CKSCG    HCPGHCGHIDLVSP+YNPLLFN LH L+ +TCF C+HFR+ R EVE C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLIQRTCFFCYHFRAERTEVEKC 120

Query: 968  VTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHK 789
            ++QL+ I +GDI+GAKRL+   K            D    PE+SEG     + LH     
Sbjct: 121  ISQLKLIGKGDIVGAKRLDSDSK------------DSSSHPENSEGCQKLGSRLH----- 163

Query: 788  HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 609
             SE      W S Q TEA+ VLN+FL                  KPTFGWFH SG+SG+Q
Sbjct: 164  ESEAVNPKEWTSLQLTEAMSVLNKFLKVKYKRCKNCDAKNPAITKPTFGWFHTSGMSGSQ 223

Query: 608  IRSNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKK 429
            +R N  R    G +       +  S++ +A+D S                          
Sbjct: 224  MRENVIR----GCKMADTFSGEVGSDIEDANDASSSEEGVDITKTKTPEIGFKGADGTSA 279

Query: 428  PMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGK 249
               +      E  K  N FSGPLLPSEV+ +++ LWENE  +CS I  IQQQ      G+
Sbjct: 280  KARKKAKVPLEFLKQKNLFSGPLLPSEVKKVMKLLWENEIELCSLINCIQQQ----GFGE 335

Query: 248  VTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSK 69
               +SMFFLE++LVPPIKFR P KGGD+VMEHP T+LL KVLQ+NI+LGNA+ N  + SK
Sbjct: 336  KVGYSMFFLETVLVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYNNDLQSSK 395

Query: 68   FINR-WMDLQQSINVLYDSKTA 6
             I R WMDLQQSIN+L+DSKTA
Sbjct: 396  VIVRLWMDLQQSINLLFDSKTA 417


>gb|KHG00372.1| DNA-directed RNA polymerase I subunit rpa[2] [Gossypium arboreum]
          Length = 789

 Score =  395 bits (1014), Expect = e-107
 Identities = 216/442 (48%), Positives = 268/442 (60%), Gaps = 1/442 (0%)
 Frame = -1

Query: 1328 MAQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDE 1149
            MAQ TE AT++V+AV F FMT EEVR HSV+K+TN NLLD + +P+ GGLYDP +GPL++
Sbjct: 1    MAQITEGATDSVDAVWFNFMTTEEVRKHSVLKLTNANLLDFMNRPMPGGLYDPVLGPLED 60

Query: 1148 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENC 969
               CKSCG    HCPGHCGHIDLVSP+YNPLLFN LH L+ +TCF C+HFR+ R EVE C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLVQRTCFFCYHFRAERTEVERC 120

Query: 968  VTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHK 789
            ++QL+ I +GDI+GAKRL+   K            D    PE+SEG     + LH     
Sbjct: 121  ISQLKLIGKGDIVGAKRLDTDSK------------DSSSHPENSEGCQKLGSRLH----- 163

Query: 788  HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 609
             SE      W S Q TEA+ VLN+FL                  KPTFGWFH SG+SG+Q
Sbjct: 164  ESEAVNPKEWTSLQLTEAMSVLNKFLKVKYKRCKNCDAKNPAITKPTFGWFHTSGMSGSQ 223

Query: 608  IRSNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKK 429
            +R N  R    G +       +  S++ +A+D S                          
Sbjct: 224  MRENVIR----GCKMADTFSGEVGSDIEDANDASSSEEGVDIKKTKTPEIGFKGADGTST 279

Query: 428  PMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGK 249
               +      E  K  N FSGPLLPSEV+ +++ LWENE  +CS I  IQQQ      G+
Sbjct: 280  KARKKAKVPLEFLKQKNLFSGPLLPSEVKKVMKLLWENEIELCSLINCIQQQ----GFGE 335

Query: 248  VTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSK 69
                SMFFLE++LVPPIKFR P KGGD+VMEHP T+LL KVLQ+NI+LGNA+ N  + SK
Sbjct: 336  KVGFSMFFLETVLVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYNNDLQSSK 395

Query: 68   FINR-WMDLQQSINVLYDSKTA 6
             I R WMDLQQSIN+L+DSKTA
Sbjct: 396  VIVRLWMDLQQSINLLFDSKTA 417


>ref|XP_011652120.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Cucumis
            sativus] gi|778684907|ref|XP_011652121.1| PREDICTED:
            DNA-directed RNA polymerase I subunit RPA1 [Cucumis
            sativus] gi|700204204|gb|KGN59337.1| hypothetical protein
            Csa_3G811600 [Cucumis sativus]
          Length = 1681

 Score =  388 bits (997), Expect = e-105
 Identities = 215/441 (48%), Positives = 265/441 (60%)
 Frame = -1

Query: 1328 MAQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDE 1149
            MAQ+TE A+E+V+ V F FMT+EEVR  SVVK+T P LLD + +P++GGLYDPAMG LDE
Sbjct: 1    MAQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE 60

Query: 1148 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENC 969
               CKSCGQR ++CPGHCGHIDLVSPVYNPLLF +LHN L  TCF C HFR+    VENC
Sbjct: 61   TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENC 120

Query: 968  VTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHK 789
             T LE I +G+I  AK L                       E+   S       HS    
Sbjct: 121  KTLLELILDGEIAKAKELE----------------------EEWMNSKSRTKSSHSMYTY 158

Query: 788  HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 609
              ++ +   W S QF+EAI V+ +FL                  KPTFGWFHM GL+G Q
Sbjct: 159  ERKNGQPETWTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQ 218

Query: 608  IRSNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKK 429
             R+NA R S+  V  + G E  SS E    ++ +                          
Sbjct: 219  KRANAIRRSK-PVSVSSGAEGVSSLEEETTTEAT-------------------------- 251

Query: 428  PMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGK 249
             +    + S E+    N  SG LLPSEV+DI++RLW+NEA +CS+I DI QQ    ++G 
Sbjct: 252  -VEDFEDVSPEVFMQKNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQGHGNKAG- 309

Query: 248  VTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSK 69
               HSMFFLES+LVPPIKFRPPAKGGD+VMEHP T+LL KVLQSNI+LGN H N +E SK
Sbjct: 310  ---HSMFFLESVLVPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSK 366

Query: 68   FINRWMDLQQSINVLYDSKTA 6
             +  WMDLQQSIN+L+DSK+A
Sbjct: 367  IVRLWMDLQQSINILFDSKSA 387


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  385 bits (989), Expect = e-104
 Identities = 216/447 (48%), Positives = 269/447 (60%), Gaps = 6/447 (1%)
 Frame = -1

Query: 1328 MAQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDE 1149
            MAQ TE AT++VEAV+F FMT EEVR HS +K+TN NLLD +++P+ GGLYD  +GPL++
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 1148 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENC 969
               CKSCG    HCPGHCGHIDLVSP+YNPLLFN LH LL + CF C+HFR+ + EVE C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 968  VTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHK 789
            V+QL+ I  GDI+GAKR            LD   +D     + +EGS  S + +H     
Sbjct: 121  VSQLKLIGNGDIVGAKR------------LDSDSADASSYSDYNEGSQESGSIVH----- 163

Query: 788  HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 609
            +SE  K   W S Q  EA+ VLN FL                  KP FGW HM+G+ G Q
Sbjct: 164  NSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQ 223

Query: 608  IRSNATRHSRL----GVRQNVGVEDKSS-SEVINASDCSWKXXXXXXXXXXXXXXXXSTK 444
            +R N  R  ++          G+ED    S   N  D +                  + K
Sbjct: 224  MRENVIRGCKMVDTFSDEAGSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARK 283

Query: 443  KSEKKPMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQH 264
            K  + P+        E  K  N FSGPLLPSEV+ I + LWENE  +CS I DIQQQ   
Sbjct: 284  KKAQVPL--------EFMKQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQ--- 332

Query: 263  GESGKVTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNS 84
               GK   +SMFFLE+ILVPPIKFR P KGGD+VMEHP T+LL KVLQ+NI+LGNA+ N+
Sbjct: 333  -GFGKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNN 391

Query: 83   AERSKFINR-WMDLQQSINVLYDSKTA 6
             + SK + R WMDLQQS+N+L+DSKTA
Sbjct: 392  LQSSKAVVRLWMDLQQSVNLLFDSKTA 418


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  385 bits (989), Expect = e-104
 Identities = 216/447 (48%), Positives = 269/447 (60%), Gaps = 6/447 (1%)
 Frame = -1

Query: 1328 MAQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDE 1149
            MAQ TE AT++VEAV+F FMT EEVR HS +K+TN NLLD +++P+ GGLYD  +GPL++
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 1148 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENC 969
               CKSCG    HCPGHCGHIDLVSP+YNPLLFN LH LL + CF C+HFR+ + EVE C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 968  VTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHK 789
            V+QL+ I  GDI+GAKR            LD   +D     + +EGS  S + +H     
Sbjct: 121  VSQLKLIGNGDIVGAKR------------LDSDSADASSYSDYNEGSQESGSIVH----- 163

Query: 788  HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 609
            +SE  K   W S Q  EA+ VLN FL                  KP FGW HM+G+ G Q
Sbjct: 164  NSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQ 223

Query: 608  IRSNATRHSRL----GVRQNVGVEDKSS-SEVINASDCSWKXXXXXXXXXXXXXXXXSTK 444
            +R N  R  ++          G+ED    S   N  D +                  + K
Sbjct: 224  MRENVIRGCKMVDTFSDEAGSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARK 283

Query: 443  KSEKKPMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQH 264
            K  + P+        E  K  N FSGPLLPSEV+ I + LWENE  +CS I DIQQQ   
Sbjct: 284  KKAQVPL--------EFMKQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQ--- 332

Query: 263  GESGKVTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNS 84
               GK   +SMFFLE+ILVPPIKFR P KGGD+VMEHP T+LL KVLQ+NI+LGNA+ N+
Sbjct: 333  -GFGKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNN 391

Query: 83   AERSKFINR-WMDLQQSINVLYDSKTA 6
             + SK + R WMDLQQS+N+L+DSKTA
Sbjct: 392  LQSSKAVVRLWMDLQQSVNLLFDSKTA 418


>ref|XP_008443105.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            rpa1 [Cucumis melo]
          Length = 1681

 Score =  378 bits (970), Expect = e-102
 Identities = 209/441 (47%), Positives = 264/441 (59%)
 Frame = -1

Query: 1328 MAQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDE 1149
            MAQ+TE A+E+V+ V F FMT+ EVR HS VK+T P LLD + +P++GGLYDPAMG LDE
Sbjct: 1    MAQTTEGASESVKVVTFSFMTNAEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDE 60

Query: 1148 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENC 969
               CKSCGQR ++CPGHCGHIDLVSPVYNPLLF  LHN L  TCF C HFR+    VE C
Sbjct: 61   TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVTLHNFLRCTCFSCHHFRAGEFMVEKC 120

Query: 968  VTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHK 789
             T LE I +G++  AK L          + +W+         DS     S   +++   K
Sbjct: 121  KTLLELILDGEVAKAKEL----------EDEWL---------DSTSRTKSSHAMYTYERK 161

Query: 788  HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 609
            + +      W S QF+EA+ V+N FL                  KPTFGW H  GL+G  
Sbjct: 162  NVQPKT---WTSLQFSEAMSVVNRFLKPKQSNCKYCGAKNPKITKPTFGWLHSKGLTGAH 218

Query: 608  IRSNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKK 429
             R+NA R S+  V  + G E  SS E    ++ +                          
Sbjct: 219  KRANAIRRSK-PVSVSSGAEGVSSLEEETTTEAT-------------------------- 251

Query: 428  PMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGK 249
             +  + + S E+    N  SG LLPSEV+DI++RLW+NEA +CS+I DI QQ    ++G 
Sbjct: 252  -VEDSEDVSPEIFMQKNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQGNGNKAG- 309

Query: 248  VTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSK 69
               HSMFFLES+LVPPIKFRPPAKGGD++MEHP T+LL KVLQSNI+LGN H N  E S+
Sbjct: 310  ---HSMFFLESVLVPPIKFRPPAKGGDSIMEHPQTVLLNKVLQSNISLGNGHANKLEHSR 366

Query: 68   FINRWMDLQQSINVLYDSKTA 6
             +  WMDLQQSIN+L+DSKTA
Sbjct: 367  IVRLWMDLQQSINILFDSKTA 387


>ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Populus
            euphratica]
          Length = 1699

 Score =  371 bits (953), Expect = e-100
 Identities = 204/439 (46%), Positives = 266/439 (60%), Gaps = 1/439 (0%)
 Frame = -1

Query: 1319 STESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDENFA 1140
            S E AT +V++V F F+TDEEV  HS VKIT+  LLDTL+KP+ GGLYDPAMGPL +   
Sbjct: 3    SLEGATVSVDSVAFSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGDE-P 61

Query: 1139 CKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENCVTQ 960
            CK+CGQRS +C GHCGHIDL+SPVYNPLLFN LH LL +TCF CFHFR+   +VE  V+Q
Sbjct: 62   CKTCGQRSTNCTGHCGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVSQ 121

Query: 959  LEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDR-HKHS 783
            LE I +GD++GAKRL+    I                PEDS+GS  S + +HS   H ++
Sbjct: 122  LELIIKGDVVGAKRLDSFSPIEASL------------PEDSDGSSESCSTIHSGAPHPNN 169

Query: 782  EHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIR 603
            E +KQ  W S Q +EA+ +LN FL                  KPTFGWFH +GLS   IR
Sbjct: 170  EQSKQSEWTSLQLSEAMSILNNFLKLESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIR 229

Query: 602  SNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKKPM 423
            SN  +   +      G    +  E+I+A D +                  + + +  + +
Sbjct: 230  SNLIKQQTI-----EGPFGGAFEELIDAEDAT--------------KSPNNKESATNRNL 270

Query: 422  HQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGKVT 243
             + +   H+     ++ S  LLPSE  DI++ LW+NEA +CS + DIQQQ   G   K  
Sbjct: 271  KEHQKLQHQFTSQKDALSSQLLPSEAMDILKLLWKNEAGLCSLMSDIQQQ---GVGKKKA 327

Query: 242  SHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFI 63
             HSMFFL ++LVPPIKFRPP KGGD+VMEHP ++LL KVL+ N +L +AH  S +     
Sbjct: 328  GHSMFFLNTVLVPPIKFRPPTKGGDSVMEHPLSVLLSKVLELNGSLADAH-RSNDFPLIA 386

Query: 62   NRWMDLQQSINVLYDSKTA 6
             RW++LQQSINVL+DS TA
Sbjct: 387  RRWLELQQSINVLFDSNTA 405


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  358 bits (920), Expect = 5e-96
 Identities = 201/442 (45%), Positives = 266/442 (60%)
 Frame = -1

Query: 1328 MAQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDE 1149
            M  +TE AT +VEAV F F+TD+E+R  S VKIT+P L+D L  P+  GLYD A+GP D+
Sbjct: 1    MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60

Query: 1148 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENC 969
               CKSCGQ S HCPGH GHI+LVSPVYNPL+FN+L N+L +TCF C HFR+   EV+  
Sbjct: 61   KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120

Query: 968  VTQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHK 789
             +QLE I +GDII AKRL   + I   K +D    D+ + P D + S    AE   +   
Sbjct: 121  TSQLELIMKGDIIRAKRL---ESIIPGKSVDSFNPDESIHPGDGDESQCYSAEQLGEN-- 175

Query: 788  HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 609
                     W S QF+EA+ VL + L                  KPTFGWFHM+ LS ++
Sbjct: 176  ---------WTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADE 226

Query: 608  IRSNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKK 429
             R++  R           VE +++++ I+                       ++  + K+
Sbjct: 227  TRADTIR----------SVESETTNDDISLG-----------GGDTTDVEDITSAGTAKR 265

Query: 428  PMHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGK 249
               +    S++L +  N  SG LLPS+V+ I+  LWENEA +CSYI DIQ Q      GK
Sbjct: 266  DKRKKEKLSYKLAE-QNKLSGSLLPSQVKGILELLWENEARLCSYINDIQDQ----GFGK 320

Query: 248  VTSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSK 69
               HSMFFLE+I VPPIKFRPP KGGD VMEHP T+LL KVLQ NI+LG+AH+N ++ SK
Sbjct: 321  KAGHSMFFLENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSK 380

Query: 68   FINRWMDLQQSINVLYDSKTAT 3
             ++RWMDLQQS+N+L+D+KTA+
Sbjct: 381  VLSRWMDLQQSVNMLFDNKTAS 402


>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
            gi|557103957|gb|ESQ44311.1| hypothetical protein
            EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score =  350 bits (898), Expect = 2e-93
 Identities = 189/441 (42%), Positives = 262/441 (59%)
 Frame = -1

Query: 1325 AQSTESATEAVEAVKFGFMTDEEVRSHSVVKITNPNLLDTLEKPITGGLYDPAMGPLDEN 1146
            AQ+ E A++ VE+V+F FMT+E+VR HSV+K+TNP LLD +E+P+ GGLYDP MGPLD+ 
Sbjct: 4    AQTIEGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGPLDDR 63

Query: 1145 FACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVENCV 966
             +CKSCGQ S  CPGHCGHI+LV P+Y+PLLFN+L+N L +TCF C HF +++ +VE CV
Sbjct: 64   TSCKSCGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFFCHHFMANKNDVERCV 123

Query: 965  TQLEQIAEGDIIGAKRLNLRQKIREKKKLDWVLSDDLVDPEDSEGSHISDAELHSDRHKH 786
            +QL+ I +G+++ AK+L+ R             +D   + EDS        E+  +R + 
Sbjct: 124  SQLKLIMKGNLVAAKQLDSR------------ATDSSEECEDS--------EMEKERCED 163

Query: 785  SEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQI 606
            S+  KQ  W S QF E   ++N FL                  KP FGW  + G+S + I
Sbjct: 164  SDMGKQR-WTSLQFAEVTDLMNTFLRLKSKSCGSCKAKPPKLEKPMFGWVRIVGMSASAI 222

Query: 605  RSNATRHSRLGVRQNVGVEDKSSSEVINASDCSWKXXXXXXXXXXXXXXXXSTKKSEKKP 426
             +N  R  ++          KS+S V N +D                      +   +K 
Sbjct: 223  GANVIRGIKV---------KKSASSVENPNDSD----------DSGIDALSEVEDGSEKK 263

Query: 425  MHQARNFSHELEKPMNSFSGPLLPSEVRDIVRRLWENEAPICSYICDIQQQQQHGESGKV 246
              ++   + E  K  N+    L PSEV+ I++ LWENE   CS+I D+ Q +        
Sbjct: 264  KRKSSEVAEEFAKHQNNTRRDLFPSEVKKILKGLWENEHEFCSFIGDLWQSESEN----- 318

Query: 245  TSHSMFFLESILVPPIKFRPPAKGGDTVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKF 66
              +SMFFLE+ILVPP KFR P KGGD+VMEHP T+ L KVL+SNI+LGNA  N  ++ K 
Sbjct: 319  VDYSMFFLENILVPPTKFRAPTKGGDSVMEHPQTVGLNKVLESNISLGNACTNKLDQPKI 378

Query: 65   INRWMDLQQSINVLYDSKTAT 3
            I+RWM+LQ+S+NVL+DSKTAT
Sbjct: 379  ISRWMNLQESVNVLFDSKTAT 399