BLASTX nr result

ID: Forsythia21_contig00007742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00007742
         (342 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010086894.1| 40S ribosomal protein S30 [Morus notabilis] ...    59   2e-06
gb|KHN42697.1| Protein transport protein Sec16B [Glycine soja]         57   4e-06
emb|CBI35991.3| unnamed protein product [Vitis vinifera]               57   6e-06
emb|CDX88582.1| BnaA03g10670D [Brassica napus]                         56   8e-06

>ref|XP_010086894.1| 40S ribosomal protein S30 [Morus notabilis]
           gi|587833880|gb|EXB24685.1| 40S ribosomal protein S30
           [Morus notabilis]
          Length = 138

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/43 (67%), Positives = 31/43 (72%)
 Frame = +3

Query: 24  DSRK*IMGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKR 152
           ++RK  MGKVHGSLARAGKVRGQTP          PRGRAHKR
Sbjct: 71  NARKSAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR 113


>gb|KHN42697.1| Protein transport protein Sec16B [Glycine soja]
          Length = 1489

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 28/38 (73%), Positives = 28/38 (73%)
 Frame = +3

Query: 39   IMGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKR 152
            IMGKVHGSLARAGKVRGQTP          PRGRAHKR
Sbjct: 1427 IMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR 1464


>emb|CBI35991.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 32/56 (57%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
 Frame = +3

Query: 3   ILLFVSGDSR------K*IMGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKR 152
           I+L V+GD        +  MGKVHGSLARAGKVRGQTP          PRGRAHKR
Sbjct: 33  IVLIVAGDQSSNHHHPQSQMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR 88


>emb|CDX88582.1| BnaA03g10670D [Brassica napus]
          Length = 86

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/42 (66%), Positives = 29/42 (69%)
 Frame = +3

Query: 27  SRK*IMGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKR 152
           S+   MGKVHGSLARAGKVRGQTP          PRGRAHKR
Sbjct: 20  SKSAAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR 61


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