BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00005774
         (1553 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC ...   463   e-127
ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC ...   463   e-127
ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC ...   436   e-119
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythra...   436   e-119
emb|CDP08205.1| unnamed protein product [Coffea canephora]            417   e-113
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ...   412   e-112
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ...   412   e-112
ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC ...   407   e-110
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ...   407   e-110
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   404   e-109
gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   401   e-109
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ...   400   e-108
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ...   399   e-108
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]      399   e-108
gb|AKC88685.1| sigma factor [Francoa sonchifolia]                     395   e-107
gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium r...   394   e-107
ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-...   394   e-107
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   394   e-107
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...   393   e-106
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   391   e-106

>ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Sesamum
            indicum]
          Length = 388

 Score =  463 bits (1192), Expect = e-127
 Identities = 232/284 (81%), Positives = 259/284 (91%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            LVA+LEK+RT+LE+ETGQVASL  WAEAA ++KK LQQ+LH+GW CR+ELLRSTRSLV+F
Sbjct: 104  LVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQNLHYGWHCRDELLRSTRSLVLF 163

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            IA+NY GLGVAFEDLIQAGN GVLQGAERFDQSRGYKFSTYVQYWIRKSMS LVARHARG
Sbjct: 164  IARNYWGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVARHARG 223

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            VRIP  LSK INQVQ+ARKALS+S+GK+PDD+++AK+TGLSIAKI SASKCLRVVGSIDQ
Sbjct: 224  VRIPCTLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQ 283

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+GE IS KY+E+ PDTSI+SPEETV RQ MI DV+RLLNGLEPRE+QVLILRFGLGN Q
Sbjct: 284  KIGEAISAKYMEIAPDTSILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQ 343

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYLYM 700
             KSLEEIGRLFCVSKEWIRKIER AL KLRN DS + LSHY+YM
Sbjct: 344  CKSLEEIGRLFCVSKEWIRKIERAALAKLRNEDSLKILSHYVYM 387


>ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Sesamum
            indicum]
          Length = 556

 Score =  463 bits (1192), Expect = e-127
 Identities = 232/284 (81%), Positives = 259/284 (91%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            LVA+LEK+RT+LE+ETGQVASL  WAEAA ++KK LQQ+LH+GW CR+ELLRSTRSLV+F
Sbjct: 272  LVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQNLHYGWHCRDELLRSTRSLVLF 331

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            IA+NY GLGVAFEDLIQAGN GVLQGAERFDQSRGYKFSTYVQYWIRKSMS LVARHARG
Sbjct: 332  IARNYWGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVARHARG 391

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            VRIP  LSK INQVQ+ARKALS+S+GK+PDD+++AK+TGLSIAKI SASKCLRVVGSIDQ
Sbjct: 392  VRIPCTLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQ 451

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+GE IS KY+E+ PDTSI+SPEETV RQ MI DV+RLLNGLEPRE+QVLILRFGLGN Q
Sbjct: 452  KIGEAISAKYMEIAPDTSILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQ 511

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYLYM 700
             KSLEEIGRLFCVSKEWIRKIER AL KLRN DS + LSHY+YM
Sbjct: 512  CKSLEEIGRLFCVSKEWIRKIERAALAKLRNEDSLKILSHYVYM 555


>ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC [Erythranthe guttatus]
          Length = 562

 Score =  436 bits (1122), Expect = e-119
 Identities = 219/283 (77%), Positives = 251/283 (88%)
 Frame = -3

Query: 1548 VADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVFI 1369
            VA+LEKIRT LE+ETGQ+ASL  WAEAA ++KK LQQHLH+GW CR+ELLRST SLV+FI
Sbjct: 279  VAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYGWHCRDELLRSTHSLVLFI 338

Query: 1368 AKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARGV 1189
            A+NY GLGVAFEDLIQAGN GVLQGAERFDQSRGYKFSTYVQYWIRKSMS LVA+HARGV
Sbjct: 339  ARNYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVAKHARGV 398

Query: 1188 RIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQK 1009
            RIP  LSK INQV KARKAL++S+GK+PDD E+AKFTGLS+AK+ SASKCLRVVGSIDQK
Sbjct: 399  RIPCTLSKVINQVHKARKALTTSNGKYPDDYEIAKFTGLSVAKVMSASKCLRVVGSIDQK 458

Query: 1008 MGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQR 829
            +GE ++TKY+E++ DTS+ SPEE V RQ M+ DV  LLNGLEPRE+QV+ILRFGLGN Q 
Sbjct: 459  IGEYMTTKYMEILSDTSMPSPEEAVIRQHMLNDVSTLLNGLEPREKQVIILRFGLGNCQC 518

Query: 828  KSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYLYM 700
            KSLEEIGRLF VSKEWIRKIER+AL KLRN DS + L+HY++M
Sbjct: 519  KSLEEIGRLFRVSKEWIRKIERSALIKLRNEDSLKILNHYVHM 561


>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythranthe guttata]
          Length = 478

 Score =  436 bits (1122), Expect = e-119
 Identities = 219/283 (77%), Positives = 251/283 (88%)
 Frame = -3

Query: 1548 VADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVFI 1369
            VA+LEKIRT LE+ETGQ+ASL  WAEAA ++KK LQQHLH+GW CR+ELLRST SLV+FI
Sbjct: 195  VAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYGWHCRDELLRSTHSLVLFI 254

Query: 1368 AKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARGV 1189
            A+NY GLGVAFEDLIQAGN GVLQGAERFDQSRGYKFSTYVQYWIRKSMS LVA+HARGV
Sbjct: 255  ARNYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVAKHARGV 314

Query: 1188 RIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQK 1009
            RIP  LSK INQV KARKAL++S+GK+PDD E+AKFTGLS+AK+ SASKCLRVVGSIDQK
Sbjct: 315  RIPCTLSKVINQVHKARKALTTSNGKYPDDYEIAKFTGLSVAKVMSASKCLRVVGSIDQK 374

Query: 1008 MGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQR 829
            +GE ++TKY+E++ DTS+ SPEE V RQ M+ DV  LLNGLEPRE+QV+ILRFGLGN Q 
Sbjct: 375  IGEYMTTKYMEILSDTSMPSPEEAVIRQHMLNDVSTLLNGLEPREKQVIILRFGLGNCQC 434

Query: 828  KSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYLYM 700
            KSLEEIGRLF VSKEWIRKIER+AL KLRN DS + L+HY++M
Sbjct: 435  KSLEEIGRLFRVSKEWIRKIERSALIKLRNEDSLKILNHYVHM 477


>emb|CDP08205.1| unnamed protein product [Coffea canephora]
          Length = 599

 Score =  417 bits (1072), Expect = e-113
 Identities = 205/284 (72%), Positives = 244/284 (85%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            LV++LE+IRT++E+ TGQV  +  WAEAA+V  +VLQQHL  GW CR+ELLRSTRSLV++
Sbjct: 316  LVSELERIRTIVEENTGQVVGMSNWAEAAQVNIQVLQQHLQFGWYCRDELLRSTRSLVLY 375

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            IA+NYRGLGVAFEDL+QAGN GVLQGA+RFD +RGYKFSTYVQYWIRKS+SM+VA+HARG
Sbjct: 376  IARNYRGLGVAFEDLVQAGNLGVLQGAQRFDHTRGYKFSTYVQYWIRKSISMVVAQHARG 435

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            +RIP  LSKAI+Q+QKARKAL SSHGK+PD NE+AKFTGLS AKI S SKCLR+VGSIDQ
Sbjct: 436  IRIPSSLSKAISQIQKARKALKSSHGKYPDVNEIAKFTGLSTAKIMSVSKCLRIVGSIDQ 495

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G+  S K LE++ DTS+ SPEETV RQ M+Q +Y L+  LEPRERQVL+LRFGL +HQ
Sbjct: 496  KVGDSSSAKRLELISDTSMRSPEETVVRQHMLQGMYGLMKDLEPRERQVLVLRFGLRSHQ 555

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYLYM 700
            RKSLEEIGRL+ VSKEW+RKIER ALTKLR  D  Q+LS Y+ M
Sbjct: 556  RKSLEEIGRLYSVSKEWVRKIERRALTKLRKNDVFQDLSQYMNM 599


>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            sylvestris]
          Length = 554

 Score =  412 bits (1058), Expect = e-112
 Identities = 202/281 (71%), Positives = 240/281 (85%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            LVA+LE+IR++LE+ETG+VAS   WAEAA VE+K LQ HLH GW CR+ELL+STRSLV++
Sbjct: 272  LVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDELLKSTRSLVLY 331

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            +A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S LVA+HARG
Sbjct: 332  LARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARG 391

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            +RIPF + KAINQ+ KARKALS SHGK P DNE+AK+TGLS A+I  ASKCLRVVGSIDQ
Sbjct: 392  IRIPFTICKAINQIHKARKALSRSHGKFPGDNEIAKYTGLSTARIAMASKCLRVVGSIDQ 451

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G  IS K LE+ PD SI+SPEETV R+ +I ++Y LL  L+P+E+QV+  RFGL NHQ
Sbjct: 452  KVGHCISAKVLELTPDKSIVSPEETVIREDIIDNMYALLESLDPKEQQVIYFRFGLENHQ 511

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHY 709
            RKSLEEIGRL+ VSKEWIR+IER ALTKLR+ D  Q+L+HY
Sbjct: 512  RKSLEEIGRLYGVSKEWIRRIERRALTKLRSADCFQDLTHY 552


>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
            sylvestris]
          Length = 584

 Score =  412 bits (1058), Expect = e-112
 Identities = 202/281 (71%), Positives = 240/281 (85%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            LVA+LE+IR++LE+ETG+VAS   WAEAA VE+K LQ HLH GW CR+ELL+STRSLV++
Sbjct: 302  LVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDELLKSTRSLVLY 361

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            +A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S LVA+HARG
Sbjct: 362  LARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARG 421

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            +RIPF + KAINQ+ KARKALS SHGK P DNE+AK+TGLS A+I  ASKCLRVVGSIDQ
Sbjct: 422  IRIPFTICKAINQIHKARKALSRSHGKFPGDNEIAKYTGLSTARIAMASKCLRVVGSIDQ 481

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G  IS K LE+ PD SI+SPEETV R+ +I ++Y LL  L+P+E+QV+  RFGL NHQ
Sbjct: 482  KVGHCISAKVLELTPDKSIVSPEETVIREDIIDNMYALLESLDPKEQQVIYFRFGLENHQ 541

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHY 709
            RKSLEEIGRL+ VSKEWIR+IER ALTKLR+ D  Q+L+HY
Sbjct: 542  RKSLEEIGRLYGVSKEWIRRIERRALTKLRSADCFQDLTHY 582


>ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            tomentosiformis]
          Length = 560

 Score =  407 bits (1045), Expect = e-110
 Identities = 199/281 (70%), Positives = 241/281 (85%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            LVA+LE+IR++LE+ETG+VAS   WAEAA VE+K LQQ LH GW CR+ELL+STRSLV++
Sbjct: 278  LVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLY 337

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            +A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S LVA+HARG
Sbjct: 338  LARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARG 397

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            +RIPF + KAINQ+ KARKALS SHGK P D+E+AK+TGLS A+I  ASKCLRVVGSIDQ
Sbjct: 398  IRIPFTICKAINQIHKARKALSRSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQ 457

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G+ IS K +E+ PD SI+SPEETV R+ +I ++Y LL  L+P+E+QV+  RFGL NHQ
Sbjct: 458  KVGDCISAKVMELTPDKSIISPEETVIREDIIDNMYALLESLDPKEQQVVYFRFGLENHQ 517

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHY 709
            RKSLEEIGRL+ VSKEWIR+IER AL+KLR+ D  Q+L+HY
Sbjct: 518  RKSLEEIGRLYGVSKEWIRRIERRALSKLRSADCFQDLTHY 558


>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
            tomentosiformis]
          Length = 572

 Score =  407 bits (1045), Expect = e-110
 Identities = 199/281 (70%), Positives = 241/281 (85%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            LVA+LE+IR++LE+ETG+VAS   WAEAA VE+K LQQ LH GW CR+ELL+STRSLV++
Sbjct: 290  LVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLY 349

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            +A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S LVA+HARG
Sbjct: 350  LARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARG 409

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            +RIPF + KAINQ+ KARKALS SHGK P D+E+AK+TGLS A+I  ASKCLRVVGSIDQ
Sbjct: 410  IRIPFTICKAINQIHKARKALSRSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQ 469

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G+ IS K +E+ PD SI+SPEETV R+ +I ++Y LL  L+P+E+QV+  RFGL NHQ
Sbjct: 470  KVGDCISAKVMELTPDKSIISPEETVIREDIIDNMYALLESLDPKEQQVVYFRFGLENHQ 529

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHY 709
            RKSLEEIGRL+ VSKEWIR+IER AL+KLR+ D  Q+L+HY
Sbjct: 530  RKSLEEIGRLYGVSKEWIRRIERRALSKLRSADCFQDLTHY 570


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum]
          Length = 555

 Score =  404 bits (1037), Expect = e-109
 Identities = 198/281 (70%), Positives = 236/281 (83%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            LVA LE+IR++LE+ETG+VA+   WAEAA +E+K LQQ LH GW CR+ELL+STRSLV++
Sbjct: 273  LVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLHFGWYCRDELLKSTRSLVLY 332

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            +A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S LVA+HARG
Sbjct: 333  LARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARG 392

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            VRIPF + K INQ+ KARK LS SHGK P D+E+AKFTGLS A+I  ASKCLRVVGSIDQ
Sbjct: 393  VRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQ 452

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G+ IS K LE+ PD SI SPEETV RQ ++ ++Y LL  L+P+E+QV+  RFGL  HQ
Sbjct: 453  KVGDCISAKVLELTPDKSITSPEETVMRQDIVDNMYSLLESLDPKEQQVIYFRFGLETHQ 512

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHY 709
            RKSLEEIGRL+ VSKEWIR+IER ALTKLRN D  Q+++HY
Sbjct: 513  RKSLEEIGRLYGVSKEWIRRIERRALTKLRNADYFQHITHY 553


>gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 556

 Score =  401 bits (1030), Expect = e-109
 Identities = 192/282 (68%), Positives = 242/282 (85%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            +VA+LE+IR  LE+ETG++ SL  WAEAA++ +KVLQQHLH+GW CR+EL+RSTRSLV++
Sbjct: 273  VVANLERIRATLEEETGRIVSLSCWAEAAKLTEKVLQQHLHYGWYCRDELIRSTRSLVLY 332

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
             A+NYRGLG+A EDLIQAG+ GVLQGAERFD +RGYKFSTY+QYWIRKS+S +VARHARG
Sbjct: 333  FARNYRGLGIAHEDLIQAGSIGVLQGAERFDHTRGYKFSTYIQYWIRKSISRMVARHARG 392

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            +++P  LS+AI Q+QKARKALS SHGK+P+++E+AK TGLS++KI SA+KC RVVGSIDQ
Sbjct: 393  IQVPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQ 452

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G+ I+ KYLE +PD SI SPE+TV RQ M +D+  LLNGLE RERQV++LR+GL    
Sbjct: 453  KIGDYINAKYLEFIPDASICSPEKTVMRQHMKEDINDLLNGLEKRERQVMVLRYGLTGSP 512

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYL 706
             KSLEEIGRLFCVSKEWIR+IE  A+ KLR+ ++ +NLSHYL
Sbjct: 513  PKSLEEIGRLFCVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 554


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum lycopersicum]
          Length = 551

 Score =  400 bits (1029), Expect = e-108
 Identities = 195/281 (69%), Positives = 236/281 (83%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            LVA LE+IR++LE+ETGQVA+   WA+AA +E+K LQQHLH GW CR+ELL+STRSLV++
Sbjct: 269  LVAQLERIRSILEEETGQVATFSSWAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLY 328

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            +A+NYRGLGVAFEDLIQAGN GVLQGA RFD +RGYKFSTYVQYWIRKS+S LVA+HARG
Sbjct: 329  LARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARG 388

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            VRIPF + K INQ+ KARK LS SHGK P D+E+AKFTGLS A+I  ASKCLRVVGSIDQ
Sbjct: 389  VRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQ 448

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G+ I+ K LE+ PD S+ SPEE V RQ ++ ++Y LL  L+P+E+QV+  RFGL  HQ
Sbjct: 449  KVGDCINAKVLELTPDKSVTSPEEFVMRQDIVDNMYALLESLDPKEQQVIYFRFGLETHQ 508

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHY 709
            RKSLEEIGRL+ VSKEWIR+IER ALTKLR+ D  Q+++HY
Sbjct: 509  RKSLEEIGRLYGVSKEWIRRIERRALTKLRSADYFQHITHY 549


>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
          Length = 606

 Score =  399 bits (1025), Expect = e-108
 Identities = 191/282 (67%), Positives = 243/282 (86%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            ++A+LEKIRT LE+ETG+  SL  WAEAA ++ KVLQQ LH GW CR+EL+RSTRSLV+F
Sbjct: 323  VLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVRSTRSLVLF 382

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            +A+NYRG+G+A EDL+QAGN GVLQGAERFD +RGY+FSTYVQYWIRKSMS +V+RHARG
Sbjct: 383  LARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFSTYVQYWIRKSMSKIVSRHARG 442

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            ++IP  LS+AINQ+QKARK LS+SHGK+PDD ++A+FTGLS+AKI SAS+CLRVVGSIDQ
Sbjct: 443  IQIPCTLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRVVGSIDQ 502

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            KMG+  + KYLE + DT+I SPEE V RQ MI+D++ LL GL+ RERQVLILR+GL +HQ
Sbjct: 503  KMGDCFNAKYLEFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQ 562

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYL 706
             KSLEEIGR+F VSKEW+R++E+  +T+LRN ++ +NL +Y+
Sbjct: 563  PKSLEEIGRVFHVSKEWVRRLEKKVMTRLRNEETCRNLRYYV 604


>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
          Length = 564

 Score =  399 bits (1025), Expect = e-108
 Identities = 191/282 (67%), Positives = 243/282 (86%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            ++A+LEKIRT LE+ETG+  SL  WAEAA ++ KVLQQ LH GW CR+EL+RSTRSLV+F
Sbjct: 281  VLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVRSTRSLVLF 340

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            +A+NYRG+G+A EDL+QAGN GVLQGAERFD +RGY+FSTYVQYWIRKSMS +V+RHARG
Sbjct: 341  LARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFSTYVQYWIRKSMSKIVSRHARG 400

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            ++IP  LS+AINQ+QKARK LS+SHGK+PDD ++A+FTGLS+AKI SAS+CLRVVGSIDQ
Sbjct: 401  IQIPCTLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRVVGSIDQ 460

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            KMG+  + KYLE + DT+I SPEE V RQ MI+D++ LL GL+ RERQVLILR+GL +HQ
Sbjct: 461  KMGDCFNAKYLEFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQ 520

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYL 706
             KSLEEIGR+F VSKEW+R++E+  +T+LRN ++ +NL +Y+
Sbjct: 521  PKSLEEIGRVFHVSKEWVRRLEKKVMTRLRNEETCRNLRYYV 562


>gb|AKC88685.1| sigma factor [Francoa sonchifolia]
          Length = 540

 Score =  395 bits (1016), Expect = e-107
 Identities = 193/282 (68%), Positives = 233/282 (82%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            ++ DLE+IRT LEKETG+V SL  WAEAA +++KVL Q L +GW CR+ELLRSTRSLV++
Sbjct: 255  VIQDLERIRTTLEKETGRVVSLSTWAEAAGIDEKVLNQDLRYGWYCRDELLRSTRSLVLY 314

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            +A+NYRGLG+A EDL+QAG  GVLQGAERFD +RGYK STYVQYWIRKSMS +VA+HARG
Sbjct: 315  LARNYRGLGIASEDLLQAGKLGVLQGAERFDHTRGYKLSTYVQYWIRKSMSRMVAQHARG 374

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            V+IP+ LS+ IN+VQKARKALS+SHGK+PDD E+AK TG+S+ KI SA KCLRVVGSIDQ
Sbjct: 375  VQIPYTLSRVINRVQKARKALSNSHGKYPDDAEIAKATGISLEKIRSAKKCLRVVGSIDQ 434

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            KM      KY+E+ PD SI  PEETV RQ MI+D+Y  L GL+ RE QVLILR+GL NH 
Sbjct: 435  KMEGCFGVKYMELTPDISIPCPEETVIRQHMIKDLYNHLQGLDQREMQVLILRYGLNNHH 494

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYL 706
             KSLEEIGRLFCVSKEWIR++E+ ALT LR  ++ ++L HYL
Sbjct: 495  PKSLEEIGRLFCVSKEWIRRVEKKALTNLRKEETRRSLIHYL 536


>gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium raimondii]
          Length = 458

 Score =  394 bits (1013), Expect = e-107
 Identities = 189/282 (67%), Positives = 241/282 (85%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            +VA+LE+IRT LE+ETG++ SL  WAEAA++ +K LQQHLH+GW CR+EL+R+TRSLV++
Sbjct: 175  VVANLERIRTTLEEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLY 234

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
             A+NYRGLG+A EDLIQAG+ GVLQGAERFD +RGYKFSTY+ YWIRKS+S +VARHARG
Sbjct: 235  FARNYRGLGIAHEDLIQAGSIGVLQGAERFDHTRGYKFSTYIHYWIRKSISRMVARHARG 294

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            +++P  LS+AI Q+QKARKALS SHGK+P+++E+AK TGLS++KI SA+KC RVVGSIDQ
Sbjct: 295  IQVPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQ 354

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G+ I+ KYLE +PD SI SPE+TV RQ M +D++ LLNGLE RERQV++LR+GL    
Sbjct: 355  KIGDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSP 414

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYL 706
             KSLEEIGRLF VSKEWIR+IE  A+ KLR+ ++ +NLSHYL
Sbjct: 415  PKSLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 456


>ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X4
            [Gossypium raimondii] gi|763798660|gb|KJB65615.1|
            hypothetical protein B456_010G103500 [Gossypium
            raimondii]
          Length = 565

 Score =  394 bits (1013), Expect = e-107
 Identities = 189/282 (67%), Positives = 241/282 (85%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            +VA+LE+IRT LE+ETG++ SL  WAEAA++ +K LQQHLH+GW CR+EL+R+TRSLV++
Sbjct: 282  VVANLERIRTTLEEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLY 341

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
             A+NYRGLG+A EDLIQAG+ GVLQGAERFD +RGYKFSTY+ YWIRKS+S +VARHARG
Sbjct: 342  FARNYRGLGIAHEDLIQAGSIGVLQGAERFDHTRGYKFSTYIHYWIRKSISRMVARHARG 401

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            +++P  LS+AI Q+QKARKALS SHGK+P+++E+AK TGLS++KI SA+KC RVVGSIDQ
Sbjct: 402  IQVPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQ 461

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G+ I+ KYLE +PD SI SPE+TV RQ M +D++ LLNGLE RERQV++LR+GL    
Sbjct: 462  KIGDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSP 521

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYL 706
             KSLEEIGRLF VSKEWIR+IE  A+ KLR+ ++ +NLSHYL
Sbjct: 522  PKSLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYL 563


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
            gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
            C, putative [Theobroma cacao]
          Length = 848

 Score =  394 bits (1013), Expect = e-107
 Identities = 192/282 (68%), Positives = 241/282 (85%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            +VA+LE+IRT LE+ETG+ ASL  WAEAA V +KVLQQHL  GW CR+ELLRSTRSLV++
Sbjct: 565  VVANLERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLY 624

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
             A+NYRGLG+A EDLIQAG+ GVLQGAERFD +RGY+FSTYVQ+WIRKS+S +VARHARG
Sbjct: 625  FARNYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARG 684

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            +++P  LS+AI Q+QKARKALS SHGK+PD++ +AKFTGLS+AKI SA+KC+RVVGSIDQ
Sbjct: 685  IQVPCTLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQ 744

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+G+ ++ KYLE +PD S+ SPE+TV RQ M +D++ LLNGL+ RERQV++LR+GL    
Sbjct: 745  KIGDCMNAKYLEFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSP 804

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYL 706
             KSLEEIGRLF VSKEWIR+IE  A+ KLR+ ++ +NLSHYL
Sbjct: 805  PKSLEEIGRLFHVSKEWIRRIEMKAMKKLRDKETCRNLSHYL 846


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
            gi|462419859|gb|EMJ24122.1| hypothetical protein
            PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  393 bits (1009), Expect = e-106
 Identities = 196/282 (69%), Positives = 234/282 (82%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            ++ADLE+I+  LEKETG+VA+L  WAEAA V +KVL QHL  GW C++EL+RSTRSLV++
Sbjct: 272  VIADLERIKETLEKETGKVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLY 331

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
            +A+NYRGLGVA +DL+QAGN G+LQGAERFD SRGY+FSTYVQYWIRKSMS LVA+HARG
Sbjct: 332  LARNYRGLGVALDDLMQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARG 391

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            V+IPF LSKAINQ+QKARKA  +SH K+PDD E+AK TGLS+A+I SAS CLRVVGS+D 
Sbjct: 392  VQIPFTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDH 451

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            KM E     Y+E  PDTS+ SPEETV RQ M +D++ LL GL  RERQVL+LR+GL N+ 
Sbjct: 452  KMWESSDGTYMEFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYD 511

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYL 706
             KSLEEIGRLF VSKEWIRKIE+ AL KLR  +SH+ LSHYL
Sbjct: 512  PKSLEEIGRLFHVSKEWIRKIEKKALMKLRVEESHKYLSHYL 553


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 560

 Score =  391 bits (1004), Expect = e-106
 Identities = 188/282 (66%), Positives = 240/282 (85%)
 Frame = -3

Query: 1551 LVADLEKIRTLLEKETGQVASLDIWAEAARVEKKVLQQHLHHGWQCREELLRSTRSLVVF 1372
            ++ADLEKIRT LE+ET +V SL  WAEAA ++ KVLQQ L  GW CR+EL++STRSLV++
Sbjct: 277  VLADLEKIRTTLEEETERVVSLSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLY 336

Query: 1371 IAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARG 1192
             A+NYRG G+A EDL+QAGN GVL+GAERFD +RGY+FSTYVQYWIRKSMS +V+R ARG
Sbjct: 337  FARNYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARG 396

Query: 1191 VRIPFMLSKAINQVQKARKALSSSHGKHPDDNEVAKFTGLSIAKITSASKCLRVVGSIDQ 1012
            ++IP  LS+AI Q+QKARKAL++S+GK+PDD+E+AK+TGLS+AKI SAS+CLRVVGSIDQ
Sbjct: 397  IQIPCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQ 456

Query: 1011 KMGEGISTKYLEVMPDTSIMSPEETVTRQQMIQDVYRLLNGLEPRERQVLILRFGLGNHQ 832
            K+GE ++ KYLE +PDTS+ SPEE V RQ MIQD++ LL  L+ RERQVLILRFGL ++Q
Sbjct: 457  KIGESLNAKYLEFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQ 516

Query: 831  RKSLEEIGRLFCVSKEWIRKIERTALTKLRNGDSHQNLSHYL 706
             KSLEEIGR F VSKEW+R++E+  +T+LRN ++ +NL HY+
Sbjct: 517  PKSLEEIGRHFHVSKEWVRRLEKRVMTRLRNEETCRNLRHYI 558