BLASTX nr result
ID: Forsythia21_contig00005016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00005016
(4812 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011071314.1| PREDICTED: RNA polymerase II C-terminal doma... 1217 0.0
ref|XP_012831645.1| PREDICTED: RNA polymerase II C-terminal doma... 1202 0.0
emb|CDP18969.1| unnamed protein product [Coffea canephora] 1202 0.0
ref|XP_009803071.1| PREDICTED: RNA polymerase II C-terminal doma... 1150 0.0
ref|XP_009627456.1| PREDICTED: RNA polymerase II C-terminal doma... 1149 0.0
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma... 1136 0.0
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma... 1094 0.0
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat... 1058 0.0
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly... 1058 0.0
ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal doma... 1052 0.0
ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal doma... 1050 0.0
ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal doma... 1046 0.0
ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal doma... 1023 0.0
ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal doma... 1021 0.0
gb|KDO83165.1| hypothetical protein CISIN_1g000897mg [Citrus sin... 1019 0.0
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr... 1018 0.0
ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal doma... 1012 0.0
gb|KDO83166.1| hypothetical protein CISIN_1g000897mg [Citrus sin... 1007 0.0
ref|XP_011020855.1| PREDICTED: RNA polymerase II C-terminal doma... 1006 0.0
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu... 998 0.0
>ref|XP_011071314.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Sesamum indicum]
Length = 1237
Score = 1217 bits (3150), Expect = 0.0
Identities = 722/1333 (54%), Positives = 839/1333 (62%), Gaps = 8/1333 (0%)
Frame = -2
Query: 4409 MEGD-SEQPQVAVEVLDVXXXXXXXXXXXXXXXXEAFNSKQELQPSSAKIXXXXXXXXXX 4233
ME D EQ V VEV DV EAFN+KQ PS
Sbjct: 1 MEDDCKEQRLVKVEVHDVEEGEISDSASVEEITEEAFNTKQAPLPSLTP-------PPPQ 53
Query: 4232 XXXXXXXXXXXXXXVGGTGARVWTMRDLYNYQITSR-NYSGLYSLAWAQAVNNKPLDEVL 4056
GG+GARVWTMRDLY YQI S+ +YSGLY+LAWAQAVNNKPL EV
Sbjct: 54 RSNPNNINVTNNNTGGGSGARVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGEVF 113
Query: 4055 VLAEXXXXXXXXXXXXXXXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXE 3876
V+ E S S G SKVVID+ E
Sbjct: 114 VMMEDGSNDSGNGNND-----------NSIGKSSNGNQSKVVIDVEDEREKEEGELEEGE 162
Query: 3875 IDLDSEVVLGNRDLNMGIENEAKPGSKEYVELEK-KQFDLIKKELESLTAADAEKSFDGL 3699
IDLDSE+V+ N+DL++ I+ E + E ELE+ K+ IK++LE+L ADA+KS+D L
Sbjct: 163 IDLDSELVVENKDLHVEIKEEGGDVN-ESSELERSKRVHSIKEQLENLNVADAQKSYDAL 221
Query: 3698 CLRLRSLVDNLQELVSESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLL 3519
C L + + LQ++V E AEKD LVQLL AI +YSVF SM KEQNR SRLL
Sbjct: 222 CRSLEATAETLQKMVFEGSFAEKDTLVQLLLTAIGTLYSVFSSMTLKLKEQNRAAFSRLL 281
Query: 3518 AYVTSLKVPLFSFYQLKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFD 3339
+ VTSL+ PLFS QLK++ SS++ SA L+ +VG+ TD +L +
Sbjct: 282 SQVTSLEPPLFSPLQLKEIEAIGSSLESSADLLS--NKNNNGRKQVGDGFCTTDL-LLLE 338
Query: 3338 NANNVSTCLKKSGIESMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDAD 3159
N NN STCLKKSGI+S TGS L+ KS + N++HKGL PLLDLHKDHDAD
Sbjct: 339 NGNNNSTCLKKSGIDSEFTGSLDQTGHSFPLQYSKSRLVNSRHKGLALPLLDLHKDHDAD 398
Query: 3158 SLPSPTRETSPPLPFDKGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQ 2979
SLPSPTR+ S PLPF+KGF+LGHGL+KPEWPVP++TL+REN +MHP ETDAVKA S+YQQ
Sbjct: 399 SLPSPTRDLSAPLPFEKGFILGHGLLKPEWPVPKRTLDRENAVMHPYETDAVKAVSSYQQ 458
Query: 2978 KFGRNSIFMSDKLPSPTPSEDGD-NGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVA 2802
KFGR+S FM+DKLPSPTPSE+GD GD +I GEVSSS N+ LN GQ VSS
Sbjct: 459 KFGRSSFFMNDKLPSPTPSEEGDATGDGEISGEVSSSIHNVNVA-LNILSSGQPVVSSST 517
Query: 2801 DMDIISGQVHSSARTTSPMTPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMAS 2622
D+++G S R P++ + +PVLKS AKSRDPRLRL N D A LN+S+ P
Sbjct: 518 AKDVLAGPEISITRNIGPVSSFGSPVLKSL-AKSRDPRLRLANPDTGARILNQSMSPAGG 576
Query: 2621 TDPKVEPLGMMSSRKQKTFDEPVLYGPASKRQRNNLHAVTGTGGWLEDRGTVGMQVKNGS 2442
+ K+E L G S R++ + + G L+
Sbjct: 577 DESKLESL-----------------GMMSSRKQKTVEELVLDGPALK------------- 606
Query: 2441 SGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPIMSPPTSLP 2262
++ ++ P TTLP+ S + P+ +P +LP
Sbjct: 607 ----------------------------RQRNEISVPNTTLPLVSTTSIFPVTNPSATLP 638
Query: 2261 ATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKMEQLKS 2082
+ P S P SL K LPV + TTSLHSLL+DIAGNPS+WMNILKME KS
Sbjct: 639 VSSPIAS-----PLKSLSEK---LPVKNANATTSLHSLLRDIAGNPSMWMNILKMEHQKS 690
Query: 2081 VDSIKSMTLPPNSNSILGAVPSIKVSPSNSPVPGHISAGLLKTPMQAIST--EESGKVRM 1908
D IKSMT P SNSILGAVPS P +S GH+ G + + G +
Sbjct: 691 SDDIKSMTQMPKSNSILGAVPSTVRVPLSSTTLGHLILGAIFVAFYLLIRLCSTHGLLPE 750
Query: 1907 KPRDPRRFLHNGTSQKGWSVGSDQPKINPAVGQGMTSSLGAQMQEDQLDRKPVSSNLIAP 1728
KP D + + ++ I G +L QEDQL+ K VSS+ + P
Sbjct: 751 KPYDGKLIRFRRLLEHPSTI------IFVLEEAGKMGNLSILKQEDQLE-KSVSSSSVKP 803
Query: 1727 PDITRQFTTNLKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGKMKTKGLVSESSNLRS 1548
PDIT QFT+NL+NIADI+ + M+TK +V++S NLR+
Sbjct: 804 PDITMQFTSNLRNIADILSVSQPSVPSPVLPQIPSSQPVLGHPAGMETKAVVTDSGNLRN 863
Query: 1547 GIGLSSQEMTAALSRP--QNAWGDVEHLFEGFDDQQKAAXXXXXXXXXXXQKNMFGARKX 1374
G +++ A RP NAW DVEHLFEGFDDQQKAA QK MF RK
Sbjct: 864 GNDSTTEAAIAVPPRPLNANAWSDVEHLFEGFDDQQKAAIQRERARRLEEQKKMFSVRKL 923
Query: 1373 XXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWN 1194
LNSAKFVEVDPLHDEMLRKKEEQDREKP RHLFRFPHMGMWTKLRPGIWN
Sbjct: 924 CLVLDLDHTLLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWN 983
Query: 1193 FLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGDSFDSEDRVPKSK 1014
FLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELF+GRV+SRGDDG+ FDS+DRVPKSK
Sbjct: 984 FLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSK 1043
Query: 1013 DLEGVLGMESAVVIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLPGPSLLEIDHDER 834
DLEGVLGMESAVVIIDDSVRVWPHNKLNLI VERYIYFPCSRRQFGLPGPSLLEIDHDER
Sbjct: 1044 DLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDER 1103
Query: 833 PEDGTLASSLAVIERIHEAFFAHQSLDEADVRNILASEQHKILSGCRILFSRVFPVGETN 654
PEDGTLASSLAVI+RIHE FFAHQSLDEADVRNILASEQ KIL+GCRI+FSRVFPVGE N
Sbjct: 1104 PEDGTLASSLAVIQRIHENFFAHQSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEAN 1163
Query: 653 PHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFVVHPGWVEASALL 474
PHMHPLWQTAEQFGAVC NQIDEQVTHVVANSLGTDKVNWA S GRFVVHPGWVEASALL
Sbjct: 1164 PHMHPLWQTAEQFGAVCINQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALL 1223
Query: 473 YRRANEQDFAIKQ 435
YRRANE DFAIKQ
Sbjct: 1224 YRRANEHDFAIKQ 1236
>ref|XP_012831645.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X1 [Erythranthe guttatus]
gi|604343093|gb|EYU42076.1| hypothetical protein
MIMGU_mgv1a000356mg [Erythranthe guttata]
Length = 1220
Score = 1202 bits (3111), Expect = 0.0
Identities = 712/1327 (53%), Positives = 834/1327 (62%), Gaps = 11/1327 (0%)
Frame = -2
Query: 4382 VAVEVLDVXXXXXXXXXXXXXXXXEAFNSKQELQPS---SAKIXXXXXXXXXXXXXXXXX 4212
V VEV DV E FN+KQ LQPS + +
Sbjct: 11 VKVEVHDVEEGEISDSASIEEISEEDFNAKQALQPSPPPAPPLKSSLNSSHINVVTSNNN 70
Query: 4211 XXXXXXXVGGTGARVWTMRDLYNYQITSRNYSGLYSLAWAQAVNNKPLDEVLVLAEXXXX 4032
GG GARVWTM+DLY YQ+ S++Y GLY+LAWAQAVNNK LDEVL++ E
Sbjct: 71 NNNSNNSAGGGGARVWTMKDLYEYQVASKHYPGLYNLAWAQAVNNKSLDEVLMMKEDGNN 130
Query: 4031 XXXXXXXXXXXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVV 3852
+ K +S KVVID+ EIDLDSE+V
Sbjct: 131 DRSNGGISDTSSSKSSKTNDS----------KVVIDVEVEGGMEEGELEEGEIDLDSELV 180
Query: 3851 LGNRDLNMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVD 3672
+ N D N+ + K ++ D IK+ELESL ADA S+ LC L++ +
Sbjct: 181 VRNMDFNVETNSNEK----------SRRVDSIKRELESLNVADAIISYHRLCSSLKNTIV 230
Query: 3671 NLQELVSESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVP 3492
+LQE+V E AEKD LVQLL AIQ +YSVF SM+ KEQN+ ILSRLLA VTSLK P
Sbjct: 231 SLQEMVLEGSFAEKDTLVQLLLTAIQTLYSVFSSMSPKLKEQNKPILSRLLARVTSLKPP 290
Query: 3491 LFSFYQLKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCL 3312
LFS QL+K R SM+ S S RVG A D VL + AN S L
Sbjct: 291 LFSPLQLEKAEAIRFSMESSVESFR--NDSNNGRERVGTA----DLHVLLETANTDSIDL 344
Query: 3311 KKSGIESMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRET 3132
+K IES +GS ECR +L + S +HKG+ PL+DLHKDHDADSLPSPTR+
Sbjct: 345 RKCEIESGPSGSPDQTECRSNLGLVIS-----RHKGVTRPLIDLHKDHDADSLPSPTRDL 399
Query: 3131 SPPLPFDKGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFM 2952
S PLPFDKGF++GHGL+KPEWPVP + +ER+N++MHP ETDAV A S+YQQKFGR+S F+
Sbjct: 400 SAPLPFDKGFIMGHGLLKPEWPVPGRNIERDNILMHPYETDAVIAVSSYQQKFGRSSFFV 459
Query: 2951 SDKLPSPTPSEDGD-NGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDI-ISGQ 2778
+DKLPSPTPSEDG +GD +I GEVSSS I +N Q VSS MD + +
Sbjct: 460 NDKLPSPTPSEDGQTSGDGEINGEVSSSIIHHVNPAVNILTSVQPVVSSSVAMDTSATPE 519
Query: 2777 VHSSARTTSPMTPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKVEPL 2598
+ +S R PVLKS+SAKSRDPRLRL N DA A + NKSL + S + K E
Sbjct: 520 ISNSLRN---------PVLKSTSAKSRDPRLRLSNSDAGAKNPNKSLSAVGSEESKWESS 570
Query: 2597 GMMSSRKQKTFDEPVLYGPASKRQRNNLHAVTGTGGWLEDRGTVGMQVKNGSSGTVLRKS 2418
GM+SSR +Q+ N V +G L++
Sbjct: 571 GMVSSR----------------KQKTNEELVL--------------------NGPALKRQ 594
Query: 2417 EDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPIMSPPTSLPATGPPTSL 2238
+ ++ GP T +P+ S TS M+ P S P TS
Sbjct: 595 RN----------------------ELSGPSTAMPLVSA-TSTSQMTLPVSAPIMSLLTS- 630
Query: 2237 AATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKMEQLKSVDSIKSMT 2058
+ P + T+SLHSLLKDIA +PSIWMNILKME LKS D IKSMT
Sbjct: 631 -----------QSEKFPSKNSNATSSLHSLLKDIAVDPSIWMNILKMENLKSSDDIKSMT 679
Query: 2057 LPPNSNSILGAVPS-IKVSPSNSPVPGHISAGLLKTPMQAISTEESGKVRMKPRDPRRFL 1881
NSNS+LGAVPS + V P +S + G ISAG ++ P QA+S EESGKVRMKPRDPRR L
Sbjct: 680 QISNSNSVLGAVPSPVGVMPLSSTI-GQISAGTVQIPSQAVSVEESGKVRMKPRDPRRVL 738
Query: 1880 HNGTSQKGWSVGSDQPKINPAVGQGMTSSLGAQMQEDQLDRKPVSSNLIAPPDITRQFTT 1701
HN QK + +DQPK + + G S++ QEDQL+ K +SS+ + PPDIT QFT
Sbjct: 739 HNNAPQKDVTSVADQPKADASFG----SAMNTPKQEDQLENK-MSSSSMKPPDITMQFTN 793
Query: 1700 NLKNIADI--VXXXXXXXXXXXXXXXXXXXXXQVYQGKMKTKGLVSESSNLRSGIGLSSQ 1527
NL+NIAD+ V + GK +T+G ++E N+R+ +++
Sbjct: 794 NLRNIADLLSVSQICTTSPVLAQIPSLQPAQGDLIAGK-ETRGPIAEYGNIRNVTDITTS 852
Query: 1526 EM-TAALSRP--QNAWGDVEHLFEGFDDQQKAAXXXXXXXXXXXQKNMFGARKXXXXXXX 1356
E T++ RP NAW DVEHLFEGFDDQQK A Q +F RK
Sbjct: 853 EAATSSPPRPLNANAWSDVEHLFEGFDDQQKVAIQRERARRLEEQNKLFAVRKLCLVLDL 912
Query: 1355 XXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKAS 1176
LNSAKFVEVDP HDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRPG+WNFLEKAS
Sbjct: 913 DHTLLNSAKFVEVDPQHDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRPGVWNFLEKAS 972
Query: 1175 KLYELHLYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVL 996
KLYELHLYTMGNKYYATEMAKLLDPKGELF+GRV+SRGDDG+ FDS+DR PKSKDLEGVL
Sbjct: 973 KLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKSKDLEGVL 1032
Query: 995 GMESAVVIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTL 816
GMES VVIIDDS+RVWPHNKLNLI VERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTL
Sbjct: 1033 GMESGVVIIDDSIRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTL 1092
Query: 815 ASSLAVIERIHEAFFAHQSLDEADVRNILASEQHKILSGCRILFSRVFPVGETNPHMHPL 636
AS VIERIHE FF H+SL+EADVRNILASEQ KIL+GCRI+FSRVFPVGE PHMHPL
Sbjct: 1093 ASCSTVIERIHENFFGHESLNEADVRNILASEQRKILAGCRIVFSRVFPVGEAKPHMHPL 1152
Query: 635 WQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFVVHPGWVEASALLYRRANE 456
WQTAEQFGAVC NQIDE VTHVVANSLGTDKVNWA STG+FVVHPGWVEASALLYRRANE
Sbjct: 1153 WQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANE 1212
Query: 455 QDFAIKQ 435
DFAIKQ
Sbjct: 1213 HDFAIKQ 1219
>emb|CDP18969.1| unnamed protein product [Coffea canephora]
Length = 1210
Score = 1202 bits (3110), Expect = 0.0
Identities = 692/1260 (54%), Positives = 828/1260 (65%), Gaps = 15/1260 (1%)
Frame = -2
Query: 4172 RVWTMRDLYNYQITSRNYS-GLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXXXXX 3996
RVWTMRDLY YQ+ SRNYS GLY+LAWA AV NKPLDE+LV+
Sbjct: 50 RVWTMRDLYKYQL-SRNYSAGLYNLAWASAVQNKPLDEILVMDIDD-------------- 94
Query: 3995 XXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVLGNRDLNMGIEN 3816
+ V +A K VI + ID+DSE +G D ++ EN
Sbjct: 95 -------SKDGVSAASRSEKHVIQVDEKEEGELEEGE---IDMDSE--MGETDGDVSKEN 142
Query: 3815 EAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELVSESLIA 3636
+ + LEK Q DL++K ES+TA +AEKSF + R+++L+D+++E+ +++
Sbjct: 143 LSGAVKDKEAVLEK-QVDLLRKGFESVTANEAEKSFGEVSSRVQNLLDSMREIAENNILT 201
Query: 3635 EKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSR-LLAYVTSLKVPLFSFYQLKKMG 3459
KD LVQL+ AI+ + +VFCSM+ +KKE ++DI+SR LLA+V+S K LFS QLK++
Sbjct: 202 TKDVLVQLVITAIKTLNAVFCSMDLNKKEYSKDIMSRWLLAHVSSQKY-LFSAEQLKEIE 260
Query: 3458 VFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKKSGIESMSTG 3279
S +D S+ +L+ R D D +N V K ++S+S
Sbjct: 261 AMTSLLDSSSETLSSMDANRNNEMRELRVVSKNDLDSSAENMKRVPE--KVFNVDSISVE 318
Query: 3278 SSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPFDKGFV 3099
SS LE KS V N+K+KGL PLLDLHKDHDADSLPSPT+ LP KGF
Sbjct: 319 SSDQPVPPALLEYGKSGVANSKYKGLSLPLLDLHKDHDADSLPSPTQGAPSCLPIVKGFS 378
Query: 3098 LGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFMSDKLPSPTPSE 2919
+GHGL+KPEWPVPR LERENV MHP ETDAVKA S+YQQKFG +S M+D+LPSPTPSE
Sbjct: 379 VGHGLLKPEWPVPRVALERENVPMHPYETDAVKAVSSYQQKFGGSSFLMNDRLPSPTPSE 438
Query: 2918 DGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDIISGQVHSSARTTSPMTP 2739
DGD GD D GEVSSSS ++ P++TS+VGQ T S + I++GQ ++ ++
Sbjct: 439 DGDGGDGDSSGEVSSSS-SMDVKPVDTSMVGQLTASDAPKIGILTGQGLANLLNAPSLSS 497
Query: 2738 WPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKVEPLG-MMSSRKQKTFD 2562
P+ +K+SSAKSRDPRLRL N D + D LLP+ + +PKVEP+G M+SSRKQKT +
Sbjct: 498 GPSSSMKTSSAKSRDPRLRLANSDVASLD---RLLPVVNGEPKVEPVGGMISSRKQKTIE 554
Query: 2561 EPVLYGPASKRQRN---------NLHAVTGTGGWLEDRGTVGMQVKNGSSGTVLRKSEDX 2409
E V+ GPA KRQRN ++ V+GTGGWLEDRGT G+ N S
Sbjct: 555 EQVMDGPALKRQRNEQTDSSVVKSVQTVSGTGGWLEDRGTAGLGATNRSHAL-------- 606
Query: 2408 XXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPIMSPPTSLPATGPPTSLAAT 2229
+GN+ M P ++ +SLA
Sbjct: 607 -------------NSSGNDP---------------------MRPEYAVTPLSSGSSLA-- 630
Query: 2228 GPFTSLPVKG-PTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKMEQLKSVDSIKSMTLP 2052
++ V G LP+T+P T SLHSLLKDIA NPSIWMNI+KMEQ KS D +S + P
Sbjct: 631 ----NVTVNGNKNLPLTNPGATASLHSLLKDIAVNPSIWMNIIKMEQQKSADPTRSTSQP 686
Query: 2051 PNSNSILGAVPSIKVSPSNSPVPGHISAGLLKTPMQAISTEESGKVRMKPRDPRRFLHNG 1872
SNSI G+V ++ P + G +AG + Q S E GKVRMKPRDPRR LHN
Sbjct: 687 TCSNSINGSVNAVVSKPRDL---GQRAAGTFQVTSQTASVAEPGKVRMKPRDPRRVLHNN 743
Query: 1871 TSQKGWSVGSDQPKINPAVGQG--MTSSLGAQMQEDQLDRKPVSSNLIAPPDITRQFTTN 1698
T QKG S+ DQ + + M ++ Q+Q+DQLDR+ V SN I PDI +QFT N
Sbjct: 744 TLQKGGSMEFDQSQTKSSTSSNPEMVGNINFQIQDDQLDRRVVPSNSIVQPDIAQQFTKN 803
Query: 1697 LKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGKMKTKGLVSESSNLRSGIGLSSQEMT 1518
LKNIADIV Q YQG+ +T G++ ES +SG GLSS+E++
Sbjct: 804 LKNIADIVSVSQATSSQPALPQISLSQPSQAYQGRTETIGML-ESGKPQSGPGLSSKEVS 862
Query: 1517 AALSRPQNAWGDVEHLFEGFDDQQKAAXXXXXXXXXXXQKNMFGARKXXXXXXXXXXXLN 1338
SRPQN W DVEHLFEGFDDQQKAA Q+ MF RK
Sbjct: 863 MGSSRPQNNWDDVEHLFEGFDDQQKAAIHRERARRMQEQRKMFAGRKLCL---------- 912
Query: 1337 SAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELH 1158
FVEVDP+HDE+LRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELH
Sbjct: 913 ---FVEVDPMHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELH 969
Query: 1157 LYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVLGMESAV 978
LYTMGNK YATEMAKLLDPKGELFAGRV+SRGDDGD D ++RVPKSKDLEGV+GMES+V
Sbjct: 970 LYTMGNKLYATEMAKLLDPKGELFAGRVISRGDDGDLLDGDERVPKSKDLEGVMGMESSV 1029
Query: 977 VIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAV 798
VIIDDS+RVWPHNKLNLI VERYI+FPCSRRQFGLPGPSLLEIDHDER EDGTLASSLAV
Sbjct: 1030 VIIDDSLRVWPHNKLNLIVVERYIFFPCSRRQFGLPGPSLLEIDHDERSEDGTLASSLAV 1089
Query: 797 IERIHEAFFAHQSLDEADVRNILASEQHKILSGCRILFSRVFPVGETNPHMHPLWQTAEQ 618
IERIHE FFAHQSLDEADVRNILASEQ KIL+GCRI+FSRVFPVGE NPH+HPLWQTAEQ
Sbjct: 1090 IERIHEIFFAHQSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQ 1149
Query: 617 FGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFVVHPGWVEASALLYRRANEQDFAIK 438
FGAVCTN IDEQVTHVVANSLGTDKVNWA S+GRFVVHPGWVEASALLYRRANE+DFAIK
Sbjct: 1150 FGAVCTNSIDEQVTHVVANSLGTDKVNWALSSGRFVVHPGWVEASALLYRRANEKDFAIK 1209
>ref|XP_009803071.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Nicotiana sylvestris] gi|698516385|ref|XP_009803072.1|
PREDICTED: RNA polymerase II C-terminal domain
phosphatase-like 3 [Nicotiana sylvestris]
Length = 1241
Score = 1150 bits (2975), Expect = 0.0
Identities = 658/1260 (52%), Positives = 810/1260 (64%), Gaps = 12/1260 (0%)
Frame = -2
Query: 4181 TGARVWTMRDLYNYQITSRNYS-GLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXX 4005
+ RVWTM+D+Y Y I SR+Y+ GLY+LAWAQAV NKPL+E+ V+
Sbjct: 61 SSTRVWTMKDIYKYPI-SRDYARGLYNLAWAQAVQNKPLNELFVMTTDDN---------- 109
Query: 4004 XXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVLGNRDLNMG 3825
+ VES+ + + VI EID D++VV+ +N G
Sbjct: 110 ----------SKQSVESSSDMVEKVIIHVDDDTMEEGELEEGEIDSDADVVV----VNGG 155
Query: 3824 IENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELVSES 3645
N + K++ +LI+++L S+T + EKSF +C +L++ +D++ EL +
Sbjct: 156 ATNN--DDELNSFKTSKEEANLIREQLLSVTVDEMEKSFPVVCSKLQNSLDSVGELAASP 213
Query: 3644 LIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVPLFSFYQLKK 3465
+ D LVQL AIQIV SVFCSMNQ++KEQNR+ILSRLL +V S L S QLK+
Sbjct: 214 ---DSDDLVQLFMTAIQIVNSVFCSMNQNQKEQNREILSRLLLHVKSQVPALLSSEQLKE 270
Query: 3464 MGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKKSGIESMS 3285
+ S++ SAVS +V + DS +NAN T +KK ++ S
Sbjct: 271 VDAVILSINQSAVSSITEDNDQDNVIKVVKVLDMNDSHSSSENANQDCTSVKKCDLDVES 330
Query: 3284 TGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPFDKG 3105
T SSG E VS E +K + N+K +GL PLLDLHKDHD D+LPSPTRE +P P K
Sbjct: 331 TKSSGPKEQNVSFEYIKPGLANSKARGLSVPLLDLHKDHDIDTLPSPTREIAPIFPIAKA 390
Query: 3104 FVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFMSDKLPSPTP 2925
HG+VKPE P+ LE+ + ++HP ETDA+KA S+YQQKFGR+S+F S+K PSPTP
Sbjct: 391 STQTHGVVKPELPMFTGALEKGSSLLHPYETDALKAVSSYQQKFGRSSLFDSEKFPSPTP 450
Query: 2924 SEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDIISGQVHSSARTTSPM 2745
S +GD+G+ D GGEVSSS++ N LN S Q VSSV +I++GQ +AR P+
Sbjct: 451 SNEGDSGEGDTGGEVSSSNVGHNASVLNASSTWQPIVSSVPPTNILAGQGLGTARNADPL 510
Query: 2744 TPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKVE-PLGMMSSRKQKT 2568
+ P P L+SS+AKSRDPRLRL +A A +L K +LP+ + D K+E L M+ SRKQK
Sbjct: 511 SFLPNPSLRSSTAKSRDPRLRLATSEAAAQNLTKKMLPIPNIDLKLEASLEMIGSRKQKI 570
Query: 2567 FDEPVLYGPASKRQR---------NNLHAVTGTGGWLEDRGTVGMQVKNGSSGTVLRKSE 2415
++P P KRQR +++ TG GGWLE RGTVG+ + +S + S
Sbjct: 571 VEQPAFDAPLLKRQRSEQTDSIIVSDVRPSTGNGGWLEHRGTVGLPI---TSSNYVTDSS 627
Query: 2414 DXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPIMSPPTSLPATGPPTSLA 2235
D N K + V T+ TS I++ +LP TG
Sbjct: 628 D----------------NDTRKLEQV---TSSVSTSNTIPSVIVNADVNLPLTG------ 662
Query: 2234 ATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKMEQLKSVDSIKSMTL 2055
+ +LHSLLKDIA NPSIWMNI+K+EQ KS D+ K+ T+
Sbjct: 663 ---------------------TSANLHSLLKDIAINPSIWMNIIKLEQQKSADASKTTTV 701
Query: 2054 PPNSNSILGAVPSIKVSPSNSPVPGHISAGLLKTPMQAISTEESGKVRMKPRDPRRFLHN 1875
+S+SILGAVPS V+ S V G S G+++TP Q + +E KVRMKPRDPRR LHN
Sbjct: 702 ASSSSSILGAVPSTNVAAPKSSVIGQRSVGIIQTPTQTTAADEVAKVRMKPRDPRRVLHN 761
Query: 1874 GTSQKGWSVGS-DQPKINPAVGQGMTSSLGAQMQEDQLDRKPVSSNLIAPPDITRQFTTN 1698
QK + GS DQ K A Q M SS Q EDQLDRK PPDI RQFT N
Sbjct: 762 TAVQKSGNSGSADQCKTGVAGTQAMISSHCVQRPEDQLDRKSAVIPSTTPPDIARQFTKN 821
Query: 1697 LKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGKMKTKGLVSESSNLRSGIGLSSQEMT 1518
LKNIAD++ QV+ +++ G VSESS L + GL+S +
Sbjct: 822 LKNIADMI-SVSPTSTSPSAASQTPAQHMQVHPSRLEGNGAVSESSELLTDAGLASGKAP 880
Query: 1517 AALSRPQNAWGDVEHLFEGFDDQQKAAXXXXXXXXXXXQKNMFGARKXXXXXXXXXXXLN 1338
+ Q++WG+VEHLFEG+ DQQ+A+ QK MF RK LN
Sbjct: 881 PGSLQLQSSWGNVEHLFEGYSDQQRASIQRERTRRLEEQKKMFSVRKLCLVLDLDHTLLN 940
Query: 1337 SAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELH 1158
SAKFVE+DP+H E+LRKKEEQDREKP++HLFRFPHMGMWTKLRPGIWNFLEKASKL+ELH
Sbjct: 941 SAKFVEIDPVHQEILRKKEEQDREKPYKHLFRFPHMGMWTKLRPGIWNFLEKASKLFELH 1000
Query: 1157 LYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVLGMESAV 978
LYTMGNK YATEMAKLLDPKG+LFAGRV+SRGDDGD D ++R+PKSKDLEGVLGMESAV
Sbjct: 1001 LYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPLDGDERIPKSKDLEGVLGMESAV 1060
Query: 977 VIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAV 798
VIIDDSVRVWPHNKLNLI VERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLAS L V
Sbjct: 1061 VIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGV 1120
Query: 797 IERIHEAFFAHQSLDEADVRNILASEQHKILSGCRILFSRVFPVGETNPHMHPLWQTAEQ 618
I+RIH+ FF H+S+DEADVRNILA+EQ KIL+GCRI+FSRVFPVGE NPH HPLWQTAEQ
Sbjct: 1121 IQRIHQNFFEHRSIDEADVRNILATEQQKILAGCRIVFSRVFPVGEANPHFHPLWQTAEQ 1180
Query: 617 FGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFVVHPGWVEASALLYRRANEQDFAIK 438
FGAVC++QIDEQVTHVVANSLGTDKVNWA STGRFVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1181 FGAVCSSQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 1240
>ref|XP_009627456.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Nicotiana tomentosiformis]
gi|697093792|ref|XP_009627526.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 3
[Nicotiana tomentosiformis]
Length = 1236
Score = 1149 bits (2972), Expect = 0.0
Identities = 658/1262 (52%), Positives = 812/1262 (64%), Gaps = 14/1262 (1%)
Frame = -2
Query: 4181 TGARVWTMRDLYNYQITSRNYS-GLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXX 4005
+ RVWTMRD+Y Y I SR+Y+ GLY+LAWAQAV NKPL+E+ V+
Sbjct: 60 SSTRVWTMRDVYKYPI-SRDYARGLYNLAWAQAVQNKPLNELFVMTTDDN---------- 108
Query: 4004 XXXXXNLKRMESECVESAG-IVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVLGNRDLNM 3828
+ VES+ +V KV+ID+ IDLD+EV++ +N
Sbjct: 109 ----------SKQSVESSSDMVEKVIIDVDDDAMEEGELEEGE-IDLDAEVLV----VNA 153
Query: 3827 GIENEAKPGSKEYVELEKKQF-DLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELVS 3651
G N +L+ Q ++I+++L S+T + EKSF +C +L++ +D+++EL +
Sbjct: 154 GATNNDD-------QLDSFQTSNVIREQLLSVTIDEMEKSFPVVCSKLQNSLDSVRELAA 206
Query: 3650 ESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVPLFSFYQL 3471
+ D LV+L AIQ V SVFCSMNQ++KEQNR+ILSRLL + S L S QL
Sbjct: 207 SP---DSDDLVRLFMTAIQTVNSVFCSMNQNQKEQNREILSRLLLHAKSQVPSLLSSEQL 263
Query: 3470 KKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKKSGIES 3291
K++ S++ SAVS +V E DS +NAN ST LKK ++
Sbjct: 264 KEVDAVILSINQSAVSSITEDNDRDNGIKVVEVLDMNDSHTSSENANQDSTSLKKCDLDV 323
Query: 3290 MSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPFD 3111
ST SSG E VS E LK + N+K + L PLLDLHKDHD D+LPSPTRE + P
Sbjct: 324 ESTKSSGPKEQNVSFESLKPGLANSKARRLSVPLLDLHKDHDIDTLPSPTREIALIFPIA 383
Query: 3110 KGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFMSDKLPSP 2931
K HG+VKPE P+ LE+ + ++HP ETDA+KA S+YQQKFGR+S+F+S+K PSP
Sbjct: 384 KASTQAHGVVKPELPMFTGVLEKGSSLLHPYETDALKAVSSYQQKFGRSSLFVSEKFPSP 443
Query: 2930 TPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDIISGQVHSSARTTS 2751
TPS++GD+G+ D GGEVSSS++ N LNTS VSSV +I++GQ +AR
Sbjct: 444 TPSDEGDSGEGDTGGEVSSSNVGHNASILNTSSTWLPIVSSVPPTNILAGQGLGTARNAD 503
Query: 2750 PMTPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKVE-PLGMMSSRKQ 2574
P++ P P L+SS+AKSRDPRLRL +A A +LN +LP+ + D K+E L M+ SRKQ
Sbjct: 504 PLSFLPNPSLRSSTAKSRDPRLRLATSEAAAQNLNMKMLPIPNIDLKLEASLEMIQSRKQ 563
Query: 2573 KTFDEPVLYGPASKRQR---------NNLHAVTGTGGWLEDRGTVGMQVKNGSSGTVLRK 2421
K ++P KRQR +++ TG GGWLE RGT G+ + + + T
Sbjct: 564 KIAEQPAFDASLLKRQRSEQTDSIIVSDVRPSTGNGGWLEHRGTAGLPITSSNYVT---- 619
Query: 2420 SEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPIMSPPTSLPATGPPTS 2241
GNG K + V + T P I++ +LP TG
Sbjct: 620 ---------------DSSGNGTRKLEQVTSSVSTSNTMPSV---IVNADVNLPLTG---- 657
Query: 2240 LAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKMEQLKSVDSIKSM 2061
+ +LHSLLKDIA NPSIWMNI+K+EQ KS D K+
Sbjct: 658 -----------------------TSANLHSLLKDIAINPSIWMNIIKLEQQKSADDSKTT 694
Query: 2060 TLPPNSNSILGAVPSIKVSPSNSPVPGHISAGLLKTPMQAISTEESGKVRMKPRDPRRFL 1881
TL +S+SILGAVPS V+ S + + G S G+++ P Q + +E KVRMKPRDPRR L
Sbjct: 695 TLASSSSSILGAVPSTNVAASRTSMIGQRSVGIIQAPTQTAAADEVAKVRMKPRDPRRVL 754
Query: 1880 HNGTSQKGWSVGS-DQPKINPAVGQGMTSSLGAQMQEDQLDRKPVSSNLIAPPDITRQFT 1704
HN QK +VGS DQ K A Q MTSS Q EDQLDRK + PPDI RQFT
Sbjct: 755 HNTAVQKSGNVGSADQCKTGVAGTQAMTSSHCVQRPEDQLDRKSAVTPSTTPPDIARQFT 814
Query: 1703 TNLKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGKMKTKGLVSESSNLRSGIGLSSQE 1524
NLKNIAD++ QV+ +++ G VSESS L + GL+S +
Sbjct: 815 KNLKNIADMI-SVSPTSTSPAAASQTPTQHMQVHPSRLEGNGAVSESSELLTDAGLASGK 873
Query: 1523 MTAALSRPQNAWGDVEHLFEGFDDQQKAAXXXXXXXXXXXQKNMFGARKXXXXXXXXXXX 1344
+PQ++WG+VEHLFEG+ DQQ+A+ QK MF RK
Sbjct: 874 APPDSLQPQSSWGNVEHLFEGYSDQQRASIQRERTRRLEEQKKMFSVRKLCLVLDLDHTL 933
Query: 1343 LNSAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYE 1164
LNSAKFVE+DP+H E+LRKKEEQDREKP+RHLFRF HMGMWTKLRPGIWNFLEKASKL+E
Sbjct: 934 LNSAKFVEIDPVHQEILRKKEEQDREKPYRHLFRFLHMGMWTKLRPGIWNFLEKASKLFE 993
Query: 1163 LHLYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVLGMES 984
LHLYTMGNK YATEMAKLLDPKG+LFAGRV+SRGDDGD D ++R+PKSKDLEGVLGMES
Sbjct: 994 LHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPLDGDERIPKSKDLEGVLGMES 1053
Query: 983 AVVIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSL 804
AVVIIDDSVRVWPHNKLNLI VERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLAS L
Sbjct: 1054 AVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCL 1113
Query: 803 AVIERIHEAFFAHQSLDEADVRNILASEQHKILSGCRILFSRVFPVGETNPHMHPLWQTA 624
VI+RIH+ FF H+S+DEADVRNILA+EQ KIL+GCRI+FSRVFPVGE NPH+HPLWQTA
Sbjct: 1114 GVIQRIHQNFFEHRSIDEADVRNILATEQQKILAGCRIVFSRVFPVGEANPHLHPLWQTA 1173
Query: 623 EQFGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFVVHPGWVEASALLYRRANEQDFA 444
EQFGAVC++QIDE VTHVVANSLGTDKVNWA STGRFVVHPGWVEAS LLYRRANE DFA
Sbjct: 1174 EQFGAVCSSQIDELVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASTLLYRRANEHDFA 1233
Query: 443 IK 438
IK
Sbjct: 1234 IK 1235
>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum tuberosum]
Length = 1218
Score = 1136 bits (2939), Expect = 0.0
Identities = 656/1264 (51%), Positives = 800/1264 (63%), Gaps = 16/1264 (1%)
Frame = -2
Query: 4181 TGARVWTMRDLYNYQITSRNYS-GLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXX 4005
T RVWTMRD Y Y I SR+Y+ GLY+LAWAQAV NKPLDE+ V+
Sbjct: 54 TTTRVWTMRDAYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDN----------- 101
Query: 4004 XXXXXNLKRMESECVES-AGIVSKVVIDMXXXXXXXXXXXXXXE-IDLDSEVVLGNRDLN 3831
++C + A + SKV+ID+ IDLD+ ++ LN
Sbjct: 102 ----------SNQCANANANVESKVIIDVDVDDDAKEEGELEEGEIDLDAADLV----LN 147
Query: 3830 MGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELVS 3651
G K+ + ++++L+S+T + KSF +C +L++ + L EL
Sbjct: 148 FG-----------------KEANFVREQLQSVTLDETHKSFSMVCSKLQTSLLALGELAL 190
Query: 3650 ESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVPLFSFYQL 3471
+ D L+QL A++ + SVF SMNQ +K+QN DILSRLL + + L S QL
Sbjct: 191 SQ--DKNDILIQLFMTALRTINSVFYSMNQDQKQQNTDILSRLLFHAKTQLPALLSSEQL 248
Query: 3470 KKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKKSGIES 3291
K++ S++ SAV N +V E S +NAN T + K + +
Sbjct: 249 KEVDAVILSINQSAVFSNTQDNDKVNGIKVVELLDKKVSHKSSENANQDFTAVNKYDLGA 308
Query: 3290 MSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPFD 3111
+S SSGL E VS E +K + N+K KGL PLLDLHKDHD D+LPSPTRE P P
Sbjct: 309 VSIKSSGLKEQSVSFESVKPGLANSKAKGLSIPLLDLHKDHDEDTLPSPTREIGPQFPVA 368
Query: 3110 KGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFMSDKLPSP 2931
K HG+VK + P+ +LE+ N ++HP ETDA+KA S+YQQKFGR+S+F+S+ LPSP
Sbjct: 369 KA-TQAHGMVKLDLPIFAGSLEKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENLPSP 427
Query: 2930 TPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDIISGQVHSSARTTS 2751
TPSE+GD+G DIGGEV+S + N LN S +GQ +SSV +I+ GQ +ART
Sbjct: 428 TPSEEGDSGKGDIGGEVTSLDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTARTAD 487
Query: 2750 PMTPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKVEP-LGMMSSRKQ 2574
P++ P P L+SS+AKSRDPRLRL DAVA + NK++LP+ D K+E L M+ S+KQ
Sbjct: 488 PLSFLPNPSLRSSTAKSRDPRLRLATSDAVAQNTNKNILPIPDIDLKLEASLEMIGSKKQ 547
Query: 2573 KTFDEPVLYGPASKRQRN---------NLHAVTGTGGWLEDRGTVGMQVKNGSSGTVLRK 2421
KT D PV P KRQR+ ++ TG GGWLEDRGT G+ + + + T
Sbjct: 548 KTVDLPVFGAPLPKRQRSEQTDSIIVSDVRPSTGNGGWLEDRGTAGLPITSSNCAT---D 604
Query: 2420 SEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLP--IMSPPTSLPATGPP 2247
S D N K + VT+ I ++P I++ + P TG
Sbjct: 605 SSD----------------NDIRKLE--------QVTATIATIPSVIVNAAENFPVTGIS 640
Query: 2246 TSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKMEQLKSVDSIK 2067
TS T+LHSLLKDIA NPSIWMNI+KMEQ KS D+ +
Sbjct: 641 TS-------------------------TTLHSLLKDIAINPSIWMNIIKMEQQKSADASR 675
Query: 2066 SMTLPPNSN-SILGAVPSIKVSPSNSPVPGHISAGLLKTPMQAISTEESGKVRMKPRDPR 1890
+ T +S+ SILGAVPS S G S G+L+TP S +E VRMKPRDPR
Sbjct: 676 TTTAQASSSKSILGAVPSTDAIAPRSSAIGQRSVGILQTPTHTASADEVAIVRMKPRDPR 735
Query: 1889 RFLHNGTSQKGWSVGSDQPKINPAVGQGMTSSLGAQMQEDQLDRKPVSSNLIAPPDITRQ 1710
R LHN KG +VGSDQ K A S+LG Q QEDQLDRK + PPDI RQ
Sbjct: 736 RVLHNTAVLKGGNVGSDQCKTGVAGTHATISNLGFQSQEDQLDRKSAVTLSTTPPDIARQ 795
Query: 1709 FTTNLKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGKMKTKGLVSESSNLRSGIGLSS 1530
FT NLKNIAD++ +Q + + K VSE S + GL+S
Sbjct: 796 FTKNLKNIADMISVSPSTSLSAASQTQTQCLQS--HQSRSEGKEAVSEPSERVNDAGLAS 853
Query: 1529 QEMTAALSRPQNAWGDVEHLFEGFDDQQKAAXXXXXXXXXXXQKNMFGARKXXXXXXXXX 1350
++ + +PQ +WGDVEHLFEG+ DQQ+A QK MF RK
Sbjct: 854 EKGSPGSLQPQISWGDVEHLFEGYSDQQRADIQRERARRLEEQKKMFSVRKLCLVLDLDH 913
Query: 1349 XXLNSAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKL 1170
LNSAKFVE+DP+H+E+LRKKEEQDREKP RHLFRFPHMGMWTKLRPGIWNFLEKAS L
Sbjct: 914 TLLNSAKFVEIDPVHEEILRKKEEQDREKPCRHLFRFPHMGMWTKLRPGIWNFLEKASNL 973
Query: 1169 YELHLYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVLGM 990
+ELHLYTMGNK YATEMAKLLDPKG+LFAGRV+SRGDDGD FD ++RVPKSKDLEGVLGM
Sbjct: 974 FELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 1033
Query: 989 ESAVVIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLAS 810
ESAVVIIDDSVRVWPHNKLNLI VERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLAS
Sbjct: 1034 ESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLAS 1093
Query: 809 SLAVIERIHEAFFAHQSLDEADVRNILASEQHKILSGCRILFSRVFPVGETNPHMHPLWQ 630
L VI+RIH+ FFAH+S+DEADVRNILA+EQ KIL+GCRI+FSRVFPVGE NPH+HPLWQ
Sbjct: 1094 CLGVIQRIHQNFFAHRSIDEADVRNILATEQKKILAGCRIVFSRVFPVGEANPHLHPLWQ 1153
Query: 629 TAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFVVHPGWVEASALLYRRANEQD 450
TAEQFGAVCT+QID+QVTHVVANSLGTDKVNWA STGRFVVHPGWVEASALLYRRANE D
Sbjct: 1154 TAEQFGAVCTSQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHD 1213
Query: 449 FAIK 438
FAIK
Sbjct: 1214 FAIK 1217
>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Solanum lycopersicum]
Length = 1211
Score = 1094 bits (2829), Expect = 0.0
Identities = 637/1263 (50%), Positives = 786/1263 (62%), Gaps = 15/1263 (1%)
Frame = -2
Query: 4181 TGARVWTMRDLYNYQITSRNYS-GLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXX 4005
T RVWTMRD+Y Y I SR+Y+ GLY+LAWAQAV NKPLDE+ V+
Sbjct: 57 TATRVWTMRDVYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDN----------- 104
Query: 4004 XXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVLGNRDLNMG 3825
++C SKV+ID +D+D + ++
Sbjct: 105 ----------SNQCANGE---SKVIID----------------VDVDDDA----KEEGEL 131
Query: 3824 IENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELVSES 3645
E E S + V K+ + I+++L+S+T + KSF +C +L++ + L EL
Sbjct: 132 EEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQ 191
Query: 3644 LIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVPLFSFYQLKK 3465
+ D L+QL A++ + SVF SMN +K+QN DILSRLL + L S QLK+
Sbjct: 192 --DKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLKE 249
Query: 3464 MGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKKSGIESMS 3285
+ S++ S VS N V + DS +NAN T + K + +S
Sbjct: 250 LDALILSINHSLVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVNKYDLGDVS 309
Query: 3284 TGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPFDKG 3105
SSGL E VS E +K + N+K KGL FPLLDLHKDHD D+LPSPTR+ P P +
Sbjct: 310 IKSSGLKEQSVSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQIGPQFPATQT 369
Query: 3104 FVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFMSDKLPSPTP 2925
HG+VK + P+ +L++ N ++HP ETDA+KA S+YQQKFGR+S+F+S+ LPSPTP
Sbjct: 370 ----HGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTP 425
Query: 2924 SEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDIISGQVHSSARTTSPM 2745
SE+ D+G D GGEV+S + N LN S +GQ +SSV +I+ GQ + RT P+
Sbjct: 426 SEEDDSGKGDTGGEVTSFDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTTRTADPL 485
Query: 2744 TPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKVEP-LGMMSSRKQKT 2568
+ P P L+SS+AKSRDPRLRL D VA ++LP+ D K+E L M+ S+KQKT
Sbjct: 486 SFLPNPSLRSSTAKSRDPRLRLATSDTVA---QNTILPIPDIDLKLEASLEMIVSKKQKT 542
Query: 2567 FDEPVLYGPASKRQRN---------NLHAVTGTGGWLEDRGTVGMQVKNGSSGTVLRKSE 2415
D P KRQR+ ++ G GGWLEDRGT + + + + T
Sbjct: 543 VDLSAFDAPLPKRQRSEQTDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATY----- 597
Query: 2414 DXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLP--IMSPPTSLPATGPPTS 2241
N K + VT+ I ++P I++ + P TG TS
Sbjct: 598 --------------NSDNDIRKLE--------QVTATIATIPSVIVNAAENFPVTGISTS 635
Query: 2240 LAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKMEQLKSVDSIKSM 2061
T+LHSLLKDIA NPSIWMNI+K EQ KS D+ ++
Sbjct: 636 -------------------------TTLHSLLKDIAINPSIWMNIIKTEQQKSADASRTN 670
Query: 2060 TLPPNSN-SILGAVPS-IKVSPSNSPVPGHISAGLLKTPMQAISTEESGKVRMKPRDPRR 1887
T +S+ SILGAVPS + V+P +S + G S G+L+TP S +E VRMKPRDPRR
Sbjct: 671 TAQASSSKSILGAVPSTVAVAPRSSAI-GQRSVGILQTPTHTASADEVAIVRMKPRDPRR 729
Query: 1886 FLHNGTSQKGWSVGSDQPKINPAVGQGMTSSLGAQMQEDQLDRKPVSSNLIAPPDITRQF 1707
LH+ KG SVG DQ K A S+L Q QEDQLDRK + PPDI QF
Sbjct: 730 VLHSTAVLKGGSVGLDQCKTGVAGTHATISNLSFQSQEDQLDRKSAVTLSTTPPDIACQF 789
Query: 1706 TTNLKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGKMKTKGLVSESSNLRSGIGLSSQ 1527
T NLKNIAD++ YQ + + KG VSE S + GL+S+
Sbjct: 790 TKNLKNIADMISVSPSTSPSVASQTQTLCIQ--AYQSRSEVKGAVSEPSEWVNDAGLASE 847
Query: 1526 EMTAALSRPQNAWGDVEHLFEGFDDQQKAAXXXXXXXXXXXQKNMFGARKXXXXXXXXXX 1347
+ + +PQ +WGDVEHLFEG+ DQQ+A QK MF RK
Sbjct: 848 KGSPGSLQPQISWGDVEHLFEGYSDQQRADIQRERTRRLEEQKKMFSVRKLCLVLDLDHT 907
Query: 1346 XLNSAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLY 1167
LNSAKFVE+DP+H+E+LRKKEEQDREKP+RHLFRFPHMGMWTKLRPGIWNFLEKAS L+
Sbjct: 908 LLNSAKFVEIDPVHEEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASNLF 967
Query: 1166 ELHLYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVLGME 987
ELHLYTMGNK YATEMAKLLDPKG+LFAGRV+SRGDDGD FD ++RVPKSKDLEGVLGME
Sbjct: 968 ELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1027
Query: 986 SAVVIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASS 807
SAVVIIDDSVRVWPHNKLNLI VERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLAS
Sbjct: 1028 SAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASC 1087
Query: 806 LAVIERIHEAFFAHQSLDEADVRNILASEQHKILSGCRILFSRVFPVGETNPHMHPLWQT 627
L VI+RIH+ FF H+S+DEADVRNILA+EQ KIL+GCRI+FSRVFPVGE +PH+HPLWQT
Sbjct: 1088 LGVIQRIHQNFFTHRSIDEADVRNILATEQKKILAGCRIVFSRVFPVGEASPHLHPLWQT 1147
Query: 626 AEQFGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFVVHPGWVEASALLYRRANEQDF 447
AEQFGAVCT+QID+QVTHVVANSLGTDKVNWA STGR VVHPGWVEASALLYRRANE DF
Sbjct: 1148 AEQFGAVCTSQIDDQVTHVVANSLGTDKVNWALSTGRSVVHPGWVEASALLYRRANEHDF 1207
Query: 446 AIK 438
AIK
Sbjct: 1208 AIK 1210
>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
[Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
polymerase II C-terminal domain phosphatase-like 3,
putative [Theobroma cacao]
Length = 1290
Score = 1058 bits (2737), Expect = 0.0
Identities = 648/1293 (50%), Positives = 789/1293 (61%), Gaps = 45/1293 (3%)
Frame = -2
Query: 4181 TGARVWTMRDLYNYQITSRNY-SGLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXX 4005
+ +RVWTM+DL Y R Y SGLY+ AWAQAV NKPL+E+ V
Sbjct: 74 SNSRVWTMQDLCKYPSVIRGYASGLYNFAWAQAVQNKPLNEIFVKDFEQPQQDENKNSKR 133
Query: 4004 XXXXXNLKRMES--ECVESAGIVSKVVID----------MXXXXXXXXXXXXXXEIDLDS 3861
++ + S E S + KVVID EIDLDS
Sbjct: 134 SSPSSSVASVNSKEEKGSSGNLAVKVVIDDDSEDEMEEDKVVNLDKEEGELEEGEIDLDS 193
Query: 3860 EV---VLGNRDLNMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLR 3690
E VL + D N+G +E + K+ +LI+ LE +T +AEKSF+G+C R
Sbjct: 194 EPKEKVLSSEDGNVGNSDELE-----------KRANLIRGVLEGVTVIEAEKSFEGVCSR 242
Query: 3689 LRSLVDNLQELVSESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYV 3510
L + +++L+ L+ E + KDAL+QL FGAI S F ++N + KEQN ILSRLL+ V
Sbjct: 243 LHNALESLRALILECSVPAKDALIQLAFGAIN---SAFVALNCNSKEQNVAILSRLLSIV 299
Query: 3509 TSLKVPLFSFYQLKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNAN 3330
LF ++K++ V S++ A +++ +V + D D L +N
Sbjct: 300 KGHDPSLFPPDKMKEIDVMLISLNSPARAIDTEKDM-----KVVDGVNKKDPDALPENIC 354
Query: 3329 NVSTCLKKSGIESMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLP 3150
+ T K + + N+ E LK V N +++G+ PLLDLHKDHDADSLP
Sbjct: 355 HDLTVTNKLPSSAKFVIN---NKPNALTETLKPGVPNFRNRGISLPLLDLHKDHDADSLP 411
Query: 3149 SPTRETSPPLPFDKGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFG 2970
SPTRET+P LP +K G +VK + + + + E +HP ETDA+KAFSTYQQKFG
Sbjct: 412 SPTRETTPCLPVNKPLTSGDVMVKSGFMTGKGSHDAEGDKLHPYETDALKAFSTYQQKFG 471
Query: 2969 RNSIFMSDKLPSPTPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDI 2790
+ S F SD+LPSPTPSE+ + D GGEVSSSS N P N I+G VSS +D
Sbjct: 472 QGSFFSSDRLPSPTPSEESGDEGGDNGGEVSSSSSIGNFKP-NLPILGHPIVSSAPLVDS 530
Query: 2789 ISGQVHS--SARTTSPMTPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMASTD 2616
S + + R +PM+ + ++ S AKSRDPRL N +A A DLN+ LL AS
Sbjct: 531 ASSSLQGQITTRNATPMSS-VSNIVSKSLAKSRDPRLWFANSNASALDLNERLLHNAS-- 587
Query: 2615 PKVEPLG-MMSSRKQKTFDEPVLYGPASKRQRNNLH---------AVTGTGGWLEDRGTV 2466
KV P+G +M SRK+K+ +EP+L PA KRQRN L V+G GGWLED +
Sbjct: 588 -KVAPVGGIMDSRKKKSVEEPILDSPALKRQRNELENLGVARDVQTVSGIGGWLEDTDAI 646
Query: 2465 GMQVKNGSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPI 2286
G Q+ N + +S NG +TS
Sbjct: 647 GSQITNRNQTAENLESNSRKMD------------NG------------------VTSSST 676
Query: 2285 MSPPTSLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNI 2106
+S T++ G +PV T+T SL +LLKDIA NP++ +NI
Sbjct: 677 LSGKTNI----------TVGTNEQVPVTS--------TSTPSLPALLKDIAVNPTMLINI 718
Query: 2105 LKM---------EQLKSVDSIKSMTLPPNSNSILGAVPSIKV--SPSNSPVPGHISAGLL 1959
LKM Q KS D +KS P+SNS+LG V S V SPS + VP IS+G+
Sbjct: 719 LKMGQQQRLGAEAQQKSPDPVKSTFHQPSSNSLLGVVSSTNVIPSPSVNNVPS-ISSGIS 777
Query: 1958 KTP---MQAISTEESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKINPAVG---QGMTS 1797
P +Q S +ESGK+RMKPRDPRR LH + Q+ S+G DQ K N A+ QG
Sbjct: 778 SKPAGNLQVPSPDESGKIRMKPRDPRRVLHGNSLQRSGSMGLDQLKTNGALTSSTQGSKD 837
Query: 1796 SLGAQMQEDQLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXXXXXXX 1617
+L AQ + Q + KP+ S L+ PPDIT+QFT NLKNIADI+
Sbjct: 838 NLNAQKLDSQTESKPMQSQLVPPPDITQQFTNNLKNIADIMSVSQALTSLPPVSHNLVPQ 897
Query: 1616 XXQVYQGKMKTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEGFDDQQKAA 1437
+ M K LVS S + ++G GL+ E A R QNAWGDVEHLFE +DDQQKAA
Sbjct: 898 PVLIKSDSMDMKALVSNSEDQQTGAGLAP-EAGATGPRSQNAWGDVEHLFERYDDQQKAA 956
Query: 1436 XXXXXXXXXXXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPH 1257
QK MF ARK LNSAKF+EVDP+H+E+LRKKEEQDREKP
Sbjct: 957 IQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKKEEQDREKPE 1016
Query: 1256 RHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFAGR 1077
RHLFRF HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LFAGR
Sbjct: 1017 RHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGR 1076
Query: 1076 VVSRGDDGDSFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAVERYIYFP 897
V+SRGDDGD FD ++RVP+SKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI VERY YFP
Sbjct: 1077 VISRGDDGDPFDGDERVPRSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFP 1136
Query: 896 CSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVRNILASEQ 717
CSRRQFGL GPSLLEIDHDERPEDGTLASSLAVIERIH+ FF+HQ+LD+ DVRNILASEQ
Sbjct: 1137 CSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQDFFSHQNLDDVDVRNILASEQ 1196
Query: 716 HKILSGCRILFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVN 537
KIL+GCRI+FSRVFPVGE NPH+HPLWQTAEQFGAVCTNQIDE VTHVVANSLGTDKVN
Sbjct: 1197 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVANSLGTDKVN 1256
Query: 536 WAFSTGRFVVHPGWVEASALLYRRANEQDFAIK 438
WA STG+FVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1257 WALSTGKFVVHPGWVEASALLYRRANEVDFAIK 1289
>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
Length = 1227
Score = 1058 bits (2736), Expect = 0.0
Identities = 630/1298 (48%), Positives = 779/1298 (60%), Gaps = 50/1298 (3%)
Frame = -2
Query: 4181 TGARVWTMRDLYNYQITSRNYS-GLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXX 4005
T RVWTMRD+Y Y I SR+Y+ GLY+LAWAQAV NKPLDE+ V+
Sbjct: 57 TATRVWTMRDVYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDN----------- 104
Query: 4004 XXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVLGNRDLNMG 3825
++C SKV+ID +D+D + ++
Sbjct: 105 ----------SNQCANGE---SKVIID----------------VDVDDDA----KEEGEL 131
Query: 3824 IENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELVSES 3645
E E S + V K+ + I+++L+S+T + KSF +C +L++ + L EL
Sbjct: 132 EEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQ 191
Query: 3644 LIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVPLFSFYQLKK 3465
+ D L+QL A++ + SVF SMN +K+QN DILSRLL + L S QLK+
Sbjct: 192 --DKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLKE 249
Query: 3464 MGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKKSGIESMS 3285
+ S++ S VS N V + DS +NAN T + K + +S
Sbjct: 250 LDALILSINHSLVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVNKYDLGDVS 309
Query: 3284 TGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPFDKG 3105
SSGL E VS E +K + N+K KGL FPLLDLHKDHD D+LPSPTR+ P P +
Sbjct: 310 IKSSGLKEQSVSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQIGPQFPATQT 369
Query: 3104 FVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFMSDKLPSPTP 2925
HG+VK + P+ +L++ N ++HP ETDA+KA S+YQQKFGR+S+F+S+ LPSPTP
Sbjct: 370 ----HGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTP 425
Query: 2924 SEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDIISGQVHSSARTTSPM 2745
SE+ D+G D GGEV+S + N LN S +GQ +SSV +I+ GQ + RT P+
Sbjct: 426 SEEDDSGKGDTGGEVTSFDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTTRTADPL 485
Query: 2744 TPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKVEP-LGMMSSRKQKT 2568
+ P P L+SS+AKSRDPRLRL D VA ++LP+ D K+E L M+ S+KQKT
Sbjct: 486 SFLPNPSLRSSTAKSRDPRLRLATSDTVA---QNTILPIPDIDLKLEASLEMIVSKKQKT 542
Query: 2567 FDEPVLYGPASKRQRN---------NLHAVTGTGGWLEDRGTVGMQVKNGSSGTVLRKSE 2415
D P KRQR+ ++ G GGWLEDRGT + + + + T
Sbjct: 543 VDLSAFDAPLPKRQRSEQTDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATY----- 597
Query: 2414 DXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLP--IMSPPTSLPATGPPTS 2241
N K + VT+ I ++P I++ + P TG TS
Sbjct: 598 --------------NSDNDIRKLE--------QVTATIATIPSVIVNAAENFPVTGISTS 635
Query: 2240 LAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKMEQLKSVDSIKSM 2061
T+LHSLLKDIA NPSIWMNI+K EQ KS D+ ++
Sbjct: 636 -------------------------TTLHSLLKDIAINPSIWMNIIKTEQQKSADASRTN 670
Query: 2060 TLPPNSN-SILGAVPS-IKVSPSNSPVPGHISAGLLKTPMQAIST--------------- 1932
T +S+ SILGAVPS + V+P +S + G S G+L+TP S
Sbjct: 671 TAQASSSKSILGAVPSTVAVAPRSSAI-GQRSVGILQTPTHTASAASSIYNLLMNDFIYS 729
Query: 1931 --------------------EESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKINPAVG 1812
+E VRMKPRDPRR LH+ KG SVG DQ K A
Sbjct: 730 VIFTASIAQFPFYFFLTFSRDEVAIVRMKPRDPRRVLHSTAVLKGGSVGLDQCKTGVAGT 789
Query: 1811 QGMTSSLGAQMQEDQLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXX 1632
S+L Q QEDQLDRK + PPDI QFT NLKNIAD++
Sbjct: 790 HATISNLSFQSQEDQLDRKSAVTLSTTPPDIACQFTKNLKNIADMISVSPSTSPSVASQT 849
Query: 1631 XXXXXXXQVYQGKMKTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEGFDD 1452
YQ + + KG VSE S + GL+S++ + +PQ +WGDVEHLFEG+ D
Sbjct: 850 QTLCIQ--AYQSRSEVKGAVSEPSEWVNDAGLASEKGSPGSLQPQISWGDVEHLFEGYSD 907
Query: 1451 QQKAAXXXXXXXXXXXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQD 1272
QQ+A QK MF FVE+DP+H+E+LRKKEEQD
Sbjct: 908 QQRADIQRERTRRLEEQKKMFS-------------------FVEIDPVHEEILRKKEEQD 948
Query: 1271 REKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGE 1092
REKP+RHLFRFPHMGMWTKLRPGIWNFLEKAS L+ELHLYTMGNK YATEMAKLLDPKG+
Sbjct: 949 REKPYRHLFRFPHMGMWTKLRPGIWNFLEKASNLFELHLYTMGNKLYATEMAKLLDPKGD 1008
Query: 1091 LFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAVER 912
LFAGRV+SRGDDGD FD ++RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI VER
Sbjct: 1009 LFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVER 1068
Query: 911 YIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVRNI 732
YIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLAS L VI+RIH+ FF H+S+DEADVRNI
Sbjct: 1069 YIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVIQRIHQNFFTHRSIDEADVRNI 1128
Query: 731 LASEQHKILSGCRILFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLG 552
LA+EQ KIL+GCRI+FSRVFPVGE +PH+HPLWQTAEQFGAVCT+QID+QVTHVVANSLG
Sbjct: 1129 LATEQKKILAGCRIVFSRVFPVGEASPHLHPLWQTAEQFGAVCTSQIDDQVTHVVANSLG 1188
Query: 551 TDKVNWAFSTGRFVVHPGWVEASALLYRRANEQDFAIK 438
TDKVNWA STGR VVHPGWVEASALLYRRANE DFAIK
Sbjct: 1189 TDKVNWALSTGRSVVHPGWVEASALLYRRANEHDFAIK 1226
>ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X3 [Vitis vinifera]
Length = 1273
Score = 1052 bits (2720), Expect = 0.0
Identities = 633/1291 (49%), Positives = 771/1291 (59%), Gaps = 46/1291 (3%)
Frame = -2
Query: 4172 RVWTMRDL---YNYQITSRNYSG-LYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXX 4005
RVWTMRDL Y Y Y+ LY+LAWAQAV NKPL+++ V+ +
Sbjct: 66 RVWTMRDLQDLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVMDDEESKRSSSSSNTS 125
Query: 4004 XXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVL----GNRD 3837
+ K + ++ +G ++ + M EIDLDSE + G D
Sbjct: 126 RDDSSSAKEVAKVIIDDSG--DEMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLD 183
Query: 3836 LNMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQEL 3657
+N E E +E VE K I+++LES+T +AEKSF G+C RL++ + +LQ++
Sbjct: 184 VN---EPEIDLKERELVERVKS----IQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKV 236
Query: 3656 VSESLIAE-----KDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVP 3492
E ++ E KDAL Q L AI+ + VFCSMN ++KE N+D+ SRLL+ V P
Sbjct: 237 FGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSP 296
Query: 3491 LFSFYQLKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCL 3312
+FS +K++ V S +D A + +V + D +++
Sbjct: 297 IFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGMNRNILDSSVESSGRAFASA 356
Query: 3311 KKSGIESMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRET 3132
KK ++S+S S N + + LK + +++ + + PLLDLHKDHD DSLPSPT +
Sbjct: 357 KKLSLDSISVESYNQN----NPDALKPGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKA 412
Query: 3131 SPPLPFDKGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFM 2952
P +K E + E ++ IMHP ETDA+KA STYQQKFG S
Sbjct: 413 PQCFPVNKS----------ELVTAKVAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLP 462
Query: 2951 SDKLPSPTPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDIISGQVH 2772
DKLPSPTPSE+ + DI GEVSSSS + N +G VSS MD Q
Sbjct: 463 IDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDSSIVQGP 522
Query: 2771 SSARTTSPMTPWP---------------TPVLKS-------SSAKSRDPRLRLVNFDAVA 2658
+ R TS ++ P T + S +SAKSRDPRLRL + DA +
Sbjct: 523 TVGRNTSLVSSGPHLDSSVVQGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAGS 582
Query: 2657 GDLNKSLLPMASTDPKVEPLG-MMSSRKQKTFDEPVLYGPASKRQRNNL---------HA 2508
DLN+ LP S PKV+PLG ++SSRKQK+ +EP+L GP +KRQRN L
Sbjct: 583 LDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQT 642
Query: 2507 VTGTGGWLEDRGTVGMQVKNGSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPC 2328
V +GGWLED TV Q+ N N+ + G
Sbjct: 643 VVASGGWLEDSNTVIPQMMNR-----------------------------NQLIENTG-- 671
Query: 2327 TTLPVTSPITSLPIMSPPTSLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSL 2148
+ P L + T + P+ ++ LPV + T SL SL
Sbjct: 672 ---------------TDPKKLESKVTVTGIGCDKPYVTVN-GNEHLPVVATSTTASLQSL 715
Query: 2147 LKDIAGNPSIWMNIL-KMEQLKSVDSIKSMTLPPNSNSILGAVPSIKVSPSNSPVPGHIS 1971
LKDIA NP++WMNI K+EQ KS D K+ LPP SNSILG VP V+P G
Sbjct: 716 LKDIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKP 775
Query: 1970 AGLLKTPMQAISTEESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKINPAVGQGMTSSL 1791
AG L+ P Q +ESGKVRMKPRDPRR LH + Q+ S GS+Q K N
Sbjct: 776 AGALQVP-QTGPMDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTN----------- 823
Query: 1790 GAQMQEDQLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXXXXXXXXX 1611
AQ QEDQ + K V S+ + PPDI++QFT NLKNIAD++
Sbjct: 824 -AQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSV 882
Query: 1610 QVYQGKMKTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEGFDDQQKAAXX 1431
QV +M K VS+S + + G S E A + +N WGDVEHLF+G+DDQQKAA
Sbjct: 883 QVNTDRMDVKATVSDSGDQLTANG-SKPESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQ 941
Query: 1430 XXXXXXXXXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPHRH 1251
QK MF ARK LNSAKFVEVDP+HDE+LRKKEEQDREK RH
Sbjct: 942 RERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRH 1001
Query: 1250 LFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFAGRVV 1071
LFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LFAGRV+
Sbjct: 1002 LFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 1061
Query: 1070 SRGDDGDSFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAVERYIYFPCS 891
S+GDDGD D ++RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI VERY YFPCS
Sbjct: 1062 SKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCS 1121
Query: 890 RRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVRNILASEQHK 711
RRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIH++FF++++LDE DVRNILASEQ K
Sbjct: 1122 RRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRK 1181
Query: 710 ILSGCRILFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWA 531
IL+GCRI+FSRVFPVGE NPH+HPLWQTAE FGAVCTNQIDEQVTHVVANSLGTDKVNWA
Sbjct: 1182 ILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWA 1241
Query: 530 FSTGRFVVHPGWVEASALLYRRANEQDFAIK 438
STGRFVVHPGWVEASALLYRRANEQDFAIK
Sbjct: 1242 LSTGRFVVHPGWVEASALLYRRANEQDFAIK 1272
>ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X2 [Vitis vinifera]
Length = 1276
Score = 1050 bits (2715), Expect = 0.0
Identities = 632/1293 (48%), Positives = 770/1293 (59%), Gaps = 48/1293 (3%)
Frame = -2
Query: 4172 RVWTMRDL---YNYQITSRNYSG-LYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXX 4005
RVWTMRDL Y Y Y+ LY+LAWAQAV NKPL+++ V+ +
Sbjct: 66 RVWTMRDLQDLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVMDDEESKRSSSSSNTS 125
Query: 4004 XXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVL----GNRD 3837
+ K + ++ +G ++ + M EIDLDSE + G D
Sbjct: 126 RDDSSSAKEVAKVIIDDSG--DEMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLD 183
Query: 3836 LNMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQEL 3657
+N E E +E VE K I+++LES+T +AEKSF G+C RL++ + +LQ++
Sbjct: 184 VN---EPEIDLKERELVERVKS----IQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKV 236
Query: 3656 VSESLIAE-----KDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVP 3492
E ++ E KDAL Q L AI+ + VFCSMN ++KE N+D+ SRLL+ V P
Sbjct: 237 FGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSP 296
Query: 3491 LFSFYQLKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCL 3312
+FS +K++ V S +D A + +V + D +++
Sbjct: 297 IFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGMNRNILDSSVESSGRAFASA 356
Query: 3311 KKSGIESMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRET 3132
KK ++S+S S N + + LK + +++ + + PLLDLHKDHD DSLPSPT +
Sbjct: 357 KKLSLDSISVESYNQN----NPDALKPGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKA 412
Query: 3131 SPPLPFDKGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFM 2952
P +K E + E ++ IMHP ETDA+KA STYQQKFG S
Sbjct: 413 PQCFPVNKS----------ELVTAKVAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLP 462
Query: 2951 SDKLPSPTPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDIISGQVH 2772
DKLPSPTPSE+ + DI GEVSSSS + N +G VSS MD Q
Sbjct: 463 IDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDSSIVQGP 522
Query: 2771 SSARTTSPMTPWP---------------TPVLKS-------SSAKSRDPRLRLVNFDAVA 2658
+ R TS ++ P T + S +SAKSRDPRLRL + DA +
Sbjct: 523 TVGRNTSLVSSGPHLDSSVVQGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAGS 582
Query: 2657 GDLNKSLLPMASTDPKVEPLG-MMSSRKQKTFDEPVLYGPASKRQRNNL---------HA 2508
DLN+ LP S PKV+PLG ++SSRKQK+ +EP+L GP +KRQRN L
Sbjct: 583 LDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQT 642
Query: 2507 VTGTGGWLEDRGTVGMQVKNGSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPC 2328
V +GGWLED TV Q+ N N+ + G
Sbjct: 643 VVASGGWLEDSNTVIPQMMNR-----------------------------NQLIENTG-- 671
Query: 2327 TTLPVTSPITSLPIMSPPTSLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSL 2148
+ P L + T + P+ ++ LPV + T SL SL
Sbjct: 672 ---------------TDPKKLESKVTVTGIGCDKPYVTVN-GNEHLPVVATSTTASLQSL 715
Query: 2147 LKDIAGNPSIWMNIL-KMEQLKSVDSIKSMTLPPNSNSILGAVPSIKVSPSNSPVPGHIS 1971
LKDIA NP++WMNI K+EQ KS D K+ LPP SNSILG VP V+P G
Sbjct: 716 LKDIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKP 775
Query: 1970 AGLLKTPMQAIST--EESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKINPAVGQGMTS 1797
AG L+ P +ESGKVRMKPRDPRR LH + Q+ S GS+Q K N
Sbjct: 776 AGALQVPQTGPMNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTN--------- 826
Query: 1796 SLGAQMQEDQLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXXXXXXX 1617
AQ QEDQ + K V S+ + PPDI++QFT NLKNIAD++
Sbjct: 827 ---AQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQ 883
Query: 1616 XXQVYQGKMKTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEGFDDQQKAA 1437
QV +M K VS+S + + G S E A + +N WGDVEHLF+G+DDQQKAA
Sbjct: 884 SVQVNTDRMDVKATVSDSGDQLTANG-SKPESAAGPPQSKNTWGDVEHLFDGYDDQQKAA 942
Query: 1436 XXXXXXXXXXXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPH 1257
QK MF ARK LNSAKFVEVDP+HDE+LRKKEEQDREK
Sbjct: 943 IQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQ 1002
Query: 1256 RHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFAGR 1077
RHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LFAGR
Sbjct: 1003 RHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGR 1062
Query: 1076 VVSRGDDGDSFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAVERYIYFP 897
V+S+GDDGD D ++RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI VERY YFP
Sbjct: 1063 VISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFP 1122
Query: 896 CSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVRNILASEQ 717
CSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIH++FF++++LDE DVRNILASEQ
Sbjct: 1123 CSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQ 1182
Query: 716 HKILSGCRILFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVN 537
KIL+GCRI+FSRVFPVGE NPH+HPLWQTAE FGAVCTNQIDEQVTHVVANSLGTDKVN
Sbjct: 1183 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVN 1242
Query: 536 WAFSTGRFVVHPGWVEASALLYRRANEQDFAIK 438
WA STGRFVVHPGWVEASALLYRRANEQDFAIK
Sbjct: 1243 WALSTGRFVVHPGWVEASALLYRRANEQDFAIK 1275
>ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X1 [Vitis vinifera]
Length = 1285
Score = 1046 bits (2705), Expect = 0.0
Identities = 632/1302 (48%), Positives = 770/1302 (59%), Gaps = 57/1302 (4%)
Frame = -2
Query: 4172 RVWTMRDL---YNYQITSRNYSG-LYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXX 4005
RVWTMRDL Y Y Y+ LY+LAWAQAV NKPL+++ V+ +
Sbjct: 66 RVWTMRDLQDLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVMDDEESKRSSSSSNTS 125
Query: 4004 XXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVL----GNRD 3837
+ K + ++ +G ++ + M EIDLDSE + G D
Sbjct: 126 RDDSSSAKEVAKVIIDDSG--DEMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLD 183
Query: 3836 LNMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQEL 3657
+N E E +E VE K I+++LES+T +AEKSF G+C RL++ + +LQ++
Sbjct: 184 VN---EPEIDLKERELVERVKS----IQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKV 236
Query: 3656 VSESLIAE-----KDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVP 3492
E ++ E KDAL Q L AI+ + VFCSMN ++KE N+D+ SRLL+ V P
Sbjct: 237 FGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSP 296
Query: 3491 LFSFYQLKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCL 3312
+FS +K++ V S +D A + +V + D +++
Sbjct: 297 IFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGMNRNILDSSVESSGRAFASA 356
Query: 3311 KKSGIESMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRET 3132
KK ++S+S S N + + LK + +++ + + PLLDLHKDHD DSLPSPT +
Sbjct: 357 KKLSLDSISVESYNQN----NPDALKPGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKA 412
Query: 3131 SPPLPFDKGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFM 2952
P +K E + E ++ IMHP ETDA+KA STYQQKFG S
Sbjct: 413 PQCFPVNKS----------ELVTAKVAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLP 462
Query: 2951 SDKLPSPTPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADMDIISGQVH 2772
DKLPSPTPSE+ + DI GEVSSSS + N +G VSS MD Q
Sbjct: 463 IDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDSSIVQGP 522
Query: 2771 SSARTTSPMTPWP---------------TPVLKS-------SSAKSRDPRLRLVNFDAVA 2658
+ R TS ++ P T + S +SAKSRDPRLRL + DA +
Sbjct: 523 TVGRNTSLVSSGPHLDSSVVQGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAGS 582
Query: 2657 GDLNKSLLPMASTDPKVEPLG-MMSSRKQKTFDEPVLYGPASKRQRNNL---------HA 2508
DLN+ LP S PKV+PLG ++SSRKQK+ +EP+L GP +KRQRN L
Sbjct: 583 LDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQT 642
Query: 2507 VTGTGGWLEDRGTVGMQVKNGSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPC 2328
V +GGWLED TV Q+ N N+ + G
Sbjct: 643 VVASGGWLEDSNTVIPQMMNR-----------------------------NQLIENTG-- 671
Query: 2327 TTLPVTSPITSLPIMSPPTSLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSL 2148
+ P L + T + P+ ++ LPV + T SL SL
Sbjct: 672 ---------------TDPKKLESKVTVTGIGCDKPYVTVN-GNEHLPVVATSTTASLQSL 715
Query: 2147 LKDIAGNPSIWMNIL-KMEQLKSVDSIKSMTLPPNSNSILGAVPSIKVSPSNSPVPGHIS 1971
LKDIA NP++WMNI K+EQ KS D K+ LPP SNSILG VP V+P G
Sbjct: 716 LKDIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKP 775
Query: 1970 AGLLKTPMQAIST-----------EESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKIN 1824
AG L+ P +ESGKVRMKPRDPRR LH + Q+ S GS+Q K N
Sbjct: 776 AGALQVPQTGPMLVTSCNNAQNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTN 835
Query: 1823 PAVGQGMTSSLGAQMQEDQLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXX 1644
AQ QEDQ + K V S+ + PPDI++QFT NLKNIAD++
Sbjct: 836 ------------AQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTP 883
Query: 1643 XXXXXXXXXXXQVYQGKMKTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFE 1464
QV +M K VS+S + + G S E A + +N WGDVEHLF+
Sbjct: 884 TFPQILSSQSVQVNTDRMDVKATVSDSGDQLTANG-SKPESAAGPPQSKNTWGDVEHLFD 942
Query: 1463 GFDDQQKAAXXXXXXXXXXXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKK 1284
G+DDQQKAA QK MF ARK LNSAKFVEVDP+HDE+LRKK
Sbjct: 943 GYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKK 1002
Query: 1283 EEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLD 1104
EEQDREK RHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LD
Sbjct: 1003 EEQDREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLD 1062
Query: 1103 PKGELFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI 924
PKG LFAGRV+S+GDDGD D ++RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI
Sbjct: 1063 PKGVLFAGRVISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI 1122
Query: 923 AVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEAD 744
VERY YFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIH++FF++++LDE D
Sbjct: 1123 VVERYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVD 1182
Query: 743 VRNILASEQHKILSGCRILFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVA 564
VRNILASEQ KIL+GCRI+FSRVFPVGE NPH+HPLWQTAE FGAVCTNQIDEQVTHVVA
Sbjct: 1183 VRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVA 1242
Query: 563 NSLGTDKVNWAFSTGRFVVHPGWVEASALLYRRANEQDFAIK 438
NSLGTDKVNWA STGRFVVHPGWVEASALLYRRANEQDFAIK
Sbjct: 1243 NSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 1284
>ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Jatropha curcas] gi|643708360|gb|KDP23276.1|
hypothetical protein JCGZ_23109 [Jatropha curcas]
Length = 1283
Score = 1023 bits (2645), Expect = 0.0
Identities = 638/1301 (49%), Positives = 775/1301 (59%), Gaps = 52/1301 (3%)
Frame = -2
Query: 4184 GTGARVWTMRDLYNYQITSRNYSGLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXX 4005
G+ R WTM+DLY YQ+ SGLY+LAWAQAV NKPL+++ V E
Sbjct: 73 GSSGRFWTMKDLYKYQMGGGYVSGLYNLAWAQAVQNKPLNDLFVEVEPDENSKRSSPSSS 132
Query: 4004 XXXXXNLKRMESECVESAGIVSKVVID--------MXXXXXXXXXXXXXXEIDLDS---- 3861
+ E E V KVVID EIDLDS
Sbjct: 133 VASVNSNSNSNKE--EEKKKVEKVVIDDSGDEMDVKIVDFEKEEGELEEGEIDLDSDPAE 190
Query: 3860 -------EVVLGNRDLNMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDG 3702
E L N ++++ + +E K K+ LEKK I++ LE+LT ++ KSF+
Sbjct: 191 KAIDEGKERFLNNDEMDIDV-SETKSKDKD---LEKK-VKFIREALEALTVTESNKSFET 245
Query: 3701 LCLRLRSLVDNLQELVSESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRL 3522
C L + + +L+E++ ++ I KD L+QL A+Q V SVF SMN +EQN+D SR
Sbjct: 246 ACSMLGNTLKSLREVIGKNNIPTKDNLLQLSSNAVQSVNSVFTSMNHKLREQNKDSFSRF 305
Query: 3521 LAYVTSLKVPLFSFYQLKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLF 3342
L+ V S L S +K++ V SS+ S++S GE +S +
Sbjct: 306 LSVVNSHVPSLLSPELIKEIEVMTSSL--SSIS--------------GEK--EKESLIFS 347
Query: 3341 DNANNVSTCLKKSGIESMST--------GSSGLNECRVSLECLKSLVGNAKHKGLVFPLL 3186
D N KS S++T GS N+ +SLE K V K + + PLL
Sbjct: 348 DEGNKKDDMSAKSSGHSLTTAKKLSSFAGSFASNKPNMSLEAPKMGVSTFKSRAGLLPLL 407
Query: 3185 DLHKDHDADSLPSPTRETSPPLPFDKGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDA 3006
DLHKDHDADSLPSPTRE +PPLP + P+ L+ E+ MHP ETDA
Sbjct: 408 DLHKDHDADSLPSPTREAAPPLPVRRV------------STPKVALDNEDTKMHPYETDA 455
Query: 3005 VKAFSTYQQKFGRNSIFMSDKLPSPTPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVG 2826
+KA S+YQQKF R+S ++D+LPSPTPSE+ NGD D+GGEVSSSS P N G
Sbjct: 456 LKAVSSYQQKFNRSSFAVNDRLPSPTPSEESGNGDGDVGGEVSSSSAVGQFRPANPPNSG 515
Query: 2825 QSTVSSVADMDIISGQVHSSARTTSPMTPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLN 2646
QS VS+ + + Q A+ P++ + +K +SAKSRDPRLR VN DA A D N
Sbjct: 516 QSIVSTSPHPESSNMQGVVPAKNAGPVSSGSSLTVK-ASAKSRDPRLRFVNSDANALDQN 574
Query: 2645 KSLLPMASTDPKVEPL-GMMSSRKQKTFDEPVLYGPASKRQRN---------NLHAVTGT 2496
+LP+ + PKVE L G M+ +KQK+ D+ VL GP+ KRQRN N+ + +
Sbjct: 575 -HVLPLVNNTPKVEYLGGPMNLKKQKSVDDSVLDGPSLKRQRNVLEHSGGVGNVKTMIAS 633
Query: 2495 GGWLEDRGTVGMQVKNGS---SGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCT 2325
GGWLED V Q N + + R+ ++ V +GNE+ V+G
Sbjct: 634 GGWLEDTDMVRPQTMNRNQLVENSDPRRMDNGVACPSTVSGISSVSISGNEQKPVIG--- 690
Query: 2324 TLPVTSPITSLPIMSPPTSLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLL 2145
TG T +G + +T T+ SL LL
Sbjct: 691 -------------------------------TGAIT----EGEQIQMTG-TSEASLPDLL 714
Query: 2144 KDIAGNPSIWMNILKM---------EQLKSVDSIKSMTLPPNSNSILGAVPSIKVSPSNS 1992
K+IA NP++ +N+LKM Q K D K+ P N+N+ILG+VP + V P
Sbjct: 715 KNIAVNPTMLLNLLKMGQQQRSAIDAQQKPSDPAKTSKHPLNANAILGSVPVVNVVPPQP 774
Query: 1991 PVPGHISAGLLKTPMQAISTEESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKIN---P 1821
V AG L+ P QA + EE GK+RMKPRDPRR LH T QK ++G +Q K N P
Sbjct: 775 SVMPR-PAGTLQVPPQA-AVEELGKIRMKPRDPRRVLHYQTLQKNGNMGYEQFKTNLTSP 832
Query: 1820 AVGQGMTSSLGAQMQEDQLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXX 1641
QG + Q Q+ Q + +PV + PDI+ FT +LKNIADIV
Sbjct: 833 PTDQGTKDNQIVQKQDGQAETEPVPLQSLVVPDISLPFTKSLKNIADIVSVSHASTSPTV 892
Query: 1640 XXXXXXXXXXQVYQGKMKTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEG 1461
T+ +VS S +GIG S+ + RPQ+AWGDVEHLFEG
Sbjct: 893 VSQNL---------ASQPTRTIVSNSEQ-PAGIG-SAPCVAPVGPRPQDAWGDVEHLFEG 941
Query: 1460 FDDQQKAAXXXXXXXXXXXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKE 1281
+ DQQKAA QK MF ARK LNSAKFVEVDP+HDE+LRKKE
Sbjct: 942 YSDQQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKE 1001
Query: 1280 EQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDP 1101
EQDREKP+RHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDP
Sbjct: 1002 EQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDP 1061
Query: 1100 KGELFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIA 921
G LF GRV+SRGDD DSFDS++RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI
Sbjct: 1062 TGVLFNGRVISRGDDTDSFDSDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIV 1121
Query: 920 VERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADV 741
VERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLA SLAVIE+IH+ FF H SLD+ADV
Sbjct: 1122 VERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIEKIHQHFFTHPSLDDADV 1181
Query: 740 RNILASEQHKILSGCRILFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVAN 561
RNILASEQ KIL+GCRI+FSRVFPVGE NPH+HPLWQTAEQFGAVCTNQIDEQVTHVVAN
Sbjct: 1182 RNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVAN 1241
Query: 560 SLGTDKVNWAFSTGRFVVHPGWVEASALLYRRANEQDFAIK 438
SLGTDKVNWA STGRFVV+PGWVEASALLYRRANEQDFAIK
Sbjct: 1242 SLGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAIK 1282
>ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X1 [Gossypium raimondii]
gi|763810289|gb|KJB77191.1| hypothetical protein
B456_012G125200 [Gossypium raimondii]
Length = 1272
Score = 1021 bits (2640), Expect = 0.0
Identities = 627/1300 (48%), Positives = 767/1300 (59%), Gaps = 52/1300 (4%)
Frame = -2
Query: 4181 TGARVWTMRDLYNYQITSRNY-SGLYSLAWAQAVNNKPLDEVLVLA---EXXXXXXXXXX 4014
+ +RVWTM+DL Y R Y SGLY+ AWAQAV NKPL+++ V +
Sbjct: 51 SNSRVWTMQDLCKYPSVIRGYASGLYNFAWAQAVQNKPLNDIFVKELEQQPQQDENNNSK 110
Query: 4013 XXXXXXXXNLKRMESECVESAGIVSKVVID----------MXXXXXXXXXXXXXXEIDLD 3864
+ E S +VVID EIDLD
Sbjct: 111 RSSPSSSVASVNSKEEKGYSGNSADRVVIDDDTGDEMEEDKIVNLDKEEGELEEGEIDLD 170
Query: 3863 SEVV----LGNRDLNMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLC 3696
SE V L + D N+GI +E + K+ +LI+ LE +T +AEKSF+ +C
Sbjct: 171 SEPVKERVLSSEDGNVGISDELE-----------KRVNLIRGVLEGITVIEAEKSFEVVC 219
Query: 3695 LRLRSLVDNLQELVSESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLA 3516
RL++ +++LQ LV E + KD L++L GA+ S F ++N + KEQN ILSRLL+
Sbjct: 220 SRLQNALESLQGLVFEYGVPTKDTLIELALGAVN---SAFVALNSNLKEQNVSILSRLLS 276
Query: 3515 YVTSLKVPLFSFYQLKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDN 3336
V PLF ++K++ V S++ A +++ + D D L +N
Sbjct: 277 VVKGFDPPLFPLDKMKEIEVMLLSLNSPARAIDSEKEIKIVNKK--------DPDALAEN 328
Query: 3335 ANNVSTCLKKSGIESMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADS 3156
+ T K +S S N + E LK V N ++KGL PLLDLHKDHDADS
Sbjct: 329 VGHDLTVTNKL---PLSVDSEIHNMPNILTEALKPGVPNFRNKGLSLPLLDLHKDHDADS 385
Query: 3155 LPSPTRETSPPLPFDKGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQK 2976
LPSPTRET+P LP + G G+V+ + + + + E MHP ETDA+KAFS+YQ+K
Sbjct: 386 LPSPTRETTPCLPVLRPLTTGDGMVRSGFMMAKGLPDAERNKMHPYETDALKAFSSYQRK 445
Query: 2975 FGRNSIFMSDKLPSPTPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADM 2796
FGR S F SD+LPSPTPSE+ + D GGEVSSSS N P N ++G VSS +
Sbjct: 446 FGRGSFFSSDRLPSPTPSEESGDEGCDTGGEVSSSSSIGNFKP-NLPVMGHPIVSSAPHI 504
Query: 2795 DIISGQVHSSAR-TTSPMTPWPTP----VLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLP 2631
D S + TT TP +L +SAKSRDPRLR N + A DLN+ L
Sbjct: 505 DSASSTSSMQGQFTTQNATPVTVSSASNILSKASAKSRDPRLRFANSNVSALDLNQRPLH 564
Query: 2630 MASTDPKVEPLGMMSSRKQKTFDEPVLYGPASKRQRNNLH--------AVTGTGGWLEDR 2475
AS P V G+M RK+K+ +EPVL GPA KRQ+N L AV+G GGWLED
Sbjct: 565 NASKVPPVS--GIMDPRKKKSTEEPVLDGPAPKRQKNELENFGVRDVQAVSGNGGWLEDT 622
Query: 2474 GTVGMQVKNGSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITS 2295
Q +T+ +
Sbjct: 623 DNCESQ-----------------------------------------------ITNRNQT 635
Query: 2294 LPIMSPPTSLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIW 2115
+ + + G S +G + K +P+T +N SL +LLKDIA NP++
Sbjct: 636 METLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTGMSNP-SLPALLKDIAVNPTML 694
Query: 2114 MNILKM---------EQLKSVDSIKSMTLPPNSNSILGAVPSIKV--SPSNSPVPGHISA 1968
+NILKM Q K+ D +K+ P+SN +LG +P V SPS + VP S+
Sbjct: 695 INILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVLGVIPPANVIPSPSVNVVPSS-SS 753
Query: 1967 GLLKTP---MQAISTEESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKIN---PAVG-Q 1809
G L P +Q +ES K+RMKPRDPRR LH QK SVG DQ K N PA Q
Sbjct: 754 GTLSKPAGNLQGPPLDESCKIRMKPRDPRRVLHGNVLQKSGSVGPDQLKTNGTSPASSTQ 813
Query: 1808 GMTSSLGAQMQ-EDQLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXX 1632
G ++ AQ Q E+Q++ KP+ + PPDI +QFT +LKNIA ++
Sbjct: 814 GSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQSLKNIAGMMSGPQSFAGLPAVSQ 873
Query: 1631 XXXXXXXQVYQ--GKMKTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEGF 1458
QV TKG S S + ++G G + + QNAWGDVEHLFE +
Sbjct: 874 NLVSQPIQVKSETADKNTKG--SNSEDQQTGTGTAPEAGVTCPPPSQNAWGDVEHLFEKY 931
Query: 1457 DDQQKAAXXXXXXXXXXXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEE 1278
DD+QKAA QK MF ARK LNSAKF+EVDP+H+E+LRKKEE
Sbjct: 932 DDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKKEE 991
Query: 1277 QDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPK 1098
QDREKP RHLFRF HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPK
Sbjct: 992 QDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPK 1051
Query: 1097 GELFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAV 918
G LFAGRV+SRGDDGD FD ++RVP+SKDLEGVLGMES+VVIIDDSVRVWPHNKLNLI V
Sbjct: 1052 GVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVV 1111
Query: 917 ERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVR 738
ERY YFPCSRRQFGL GPSLLEIDHDERPEDGTLASSLAVIERIH+ FF+HQ+LD+ DVR
Sbjct: 1112 ERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFSHQNLDDLDVR 1171
Query: 737 NILASEQHKILSGCRILFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANS 558
NILA+EQ KILSGCRI+FSRVFPVGE NPH+HPLWQTAEQFGAVCTNQIDE VTHVVANS
Sbjct: 1172 NILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVANS 1231
Query: 557 LGTDKVNWAFSTGRFVVHPGWVEASALLYRRANEQDFAIK 438
LGTDKVNWA STG+FVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1232 LGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAIK 1271
>gb|KDO83165.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
Length = 1234
Score = 1019 bits (2634), Expect = 0.0
Identities = 622/1284 (48%), Positives = 766/1284 (59%), Gaps = 34/1284 (2%)
Frame = -2
Query: 4187 GGTGARVWTMRDLYN-YQITSRNYS-GLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXX 4014
G ARVWTMRDLYN Y R Y GL++LAWAQAV NKPL+E+ V+
Sbjct: 46 GEAAARVWTMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSS 105
Query: 4013 XXXXXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVLGNRDL 3834
N + + +V KVVID + E+ G +L
Sbjct: 106 PASSVASVNSGAAAGK--DDKKVVEKVVIDDSGDEIEKE----------EGELEEGEIEL 153
Query: 3833 NMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELV 3654
++ E+ K + E++ + I++ LES+ D SF+G+C +L +++L+ELV
Sbjct: 154 DLESESNEKVSEQVKEEMKLINVESIREALESVLRGDI--SFEGVCSKLEFTLESLRELV 211
Query: 3653 SESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVPLFSFYQ 3474
+E+ + KDAL+QL F A+Q V+SVFCSMN KEQN++ILSRLL+ + S + PLFS Q
Sbjct: 212 NENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSLIKSHEPPLFSSNQ 271
Query: 3473 LKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKKSGIE 3294
+K+M SS+ A + DS+++ +NA N +K +
Sbjct: 272 IKEMEAMLSSLVTRANDKEKDMLAMHGVN-------GKDSNIVTENAVNDLNFKEKVPLP 324
Query: 3293 SMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPF 3114
S + LE K + +G++ PLLD HK HD DSLPSPTRET+P +P
Sbjct: 325 VDSLMQNK------PLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPV 378
Query: 3113 DKGFVLGHGLVKPEWPVPRQTLERENVIMHPN-ETDAVKAFSTYQQKFGRNSIFMSDKLP 2937
+ V+G G+VK W + V P+ ETDA++AFS+YQQKFGRNS FM+ +LP
Sbjct: 379 QRALVVGDGMVK-SWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELP 437
Query: 2936 SPTPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVA-----DMDIISGQVH 2772
SPTPSE+ +GD D GGE+SS++ P+N +GQ VSS MDI S Q
Sbjct: 438 SPTPSEESGDGDGDTGGEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQAL 497
Query: 2771 SSARTTSPMTPWPTPVLKSSSA-----KSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKV 2607
++A ++P + PV+K + KSRDPRLR + +A+ +LN P+ PKV
Sbjct: 498 TTANNSAPASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNAL--NLNHQPAPILHNAPKV 555
Query: 2606 EPLG-MMSSRKQKTFDEPVLYGPASKRQRNNLHA---------VTGTGGWLEDRGTVGMQ 2457
EP+G +MSSRKQKT +EPVL GPA KRQRN + G+GGWLED Q
Sbjct: 556 EPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQ 615
Query: 2456 VKNGSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPIMSP 2277
+ N + +S NG TSPITS
Sbjct: 616 IMNRNLLVDSAESNSRKLD------------NG--------------ATSPITS----GT 645
Query: 2276 PTSLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKM 2097
P + + P P T P+ T SL +LLKDIA NP++ +NILKM
Sbjct: 646 PNVVVSGNEPA------------------PATTPSTTVSLPALLKDIAVNPTMLLNILKM 687
Query: 2096 ---------EQLKSVDSIKSMTLPPNSNSILGAVPSIKVSPSNSPVPGHISAGLLKTPMQ 1944
Q KS DS + PP +SI P + V+ S I +G+L PM
Sbjct: 688 GQQQKLAADAQQKSNDSSMNTMHPPIPSSI----PPVSVTCS-------IPSGILSKPM- 735
Query: 1943 AISTEESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKINPAVG--QGMTSSLGAQMQED 1770
+E GKVRMKPRDPRR LH Q+ S+G + P+ QG +L Q Q
Sbjct: 736 ----DELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGPSAPCTQGSKENLNFQKQLG 791
Query: 1769 QLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGKM 1590
+ KPV S + PDIT+QFT NLK+IAD + Q+ G
Sbjct: 792 APEAKPVLSQSVLQPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSPIQPGQIKSGA- 850
Query: 1589 KTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEGFDDQQKAAXXXXXXXXX 1410
K +V+ + ++G G S E + PQ+AWGDVEHLFEG+DDQQKAA
Sbjct: 851 DMKAVVTNHDDKQTGTG-SGPEAGPVGAHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRL 909
Query: 1409 XXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHM 1230
QK MF ARK LNSAKF EVDP+HDE+LRKKEEQDREKPHRHLFRFPHM
Sbjct: 910 EEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHM 969
Query: 1229 GMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGD 1050
GMWTKLRPGIW FLE+ASKL+E+HLYTMGNK YATEMAK+LDPKG LFAGRV+SRGDDGD
Sbjct: 970 GMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD 1029
Query: 1049 SFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLP 870
FD ++RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI VERY YFPCSRRQFGL
Sbjct: 1030 PFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLL 1089
Query: 869 GPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVRNILASEQHKILSGCRI 690
GPSLLEIDHDER EDGTLASSL VIER+H+ FF+HQSLD+ DVRNILA+EQ KIL+GCRI
Sbjct: 1090 GPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRI 1149
Query: 689 LFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFV 510
+FSRVFPVGE NPH+HPLWQTAEQFGAVCT ID+QVTHVVANSLGTDKVNWA STGRFV
Sbjct: 1150 VFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFV 1209
Query: 509 VHPGWVEASALLYRRANEQDFAIK 438
VHPGWVEASALLYRRANEQDFAIK
Sbjct: 1210 VHPGWVEASALLYRRANEQDFAIK 1233
>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 3-like
[Citrus sinensis] gi|557541056|gb|ESR52100.1|
hypothetical protein CICLE_v10030535mg [Citrus
clementina]
Length = 1234
Score = 1018 bits (2633), Expect = 0.0
Identities = 622/1284 (48%), Positives = 766/1284 (59%), Gaps = 34/1284 (2%)
Frame = -2
Query: 4187 GGTGARVWTMRDLYN-YQITSRNYS-GLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXX 4014
G ARVWTMRDLYN Y R Y GL++LAWAQAV NKPL+E+ V+
Sbjct: 46 GEAAARVWTMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSS 105
Query: 4013 XXXXXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVLGNRDL 3834
N + + +V KVVID + E+ G +L
Sbjct: 106 PASSVASVNSGAAAGK--DDKKVVEKVVIDDSGDEIEKE----------EGELEEGEIEL 153
Query: 3833 NMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELV 3654
++ E+ K + E++ + I++ LES+ D SF+G+C +L +++L+ELV
Sbjct: 154 DLESESNEKVSEQVKEEMKLINVESIREALESVLRGDI--SFEGVCSKLEFTLESLRELV 211
Query: 3653 SESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVPLFSFYQ 3474
+E+ + KDAL+QL F A+Q V+SVFCSMN KEQN++ILSRLL+ + S + PLFS Q
Sbjct: 212 NENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQ 271
Query: 3473 LKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKKSGIE 3294
+K+M SS+ A + DS+++ +NA N +K +
Sbjct: 272 IKEMEAMLSSLVTRANDKEKDMLAMHGVN-------GKDSNIVTENAVNDLNFKEKVPLP 324
Query: 3293 SMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPF 3114
S + LE K + +G++ PLLD HK HD DSLPSPTRET+P +P
Sbjct: 325 VDSLMQNK------PLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPV 378
Query: 3113 DKGFVLGHGLVKPEWPVPRQTLERENVIMHPN-ETDAVKAFSTYQQKFGRNSIFMSDKLP 2937
+ V+G G+VK W + V P+ ETDA++AFS+YQQKFGRNS FM+ +LP
Sbjct: 379 QRALVVGDGVVK-SWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELP 437
Query: 2936 SPTPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVA-----DMDIISGQVH 2772
SPTPSE+ +GD D GGE+SS++ P+N +GQ VSS MDI S Q
Sbjct: 438 SPTPSEESGDGDGDTGGEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQAL 497
Query: 2771 SSARTTSPMTPWPTPVLKSSSA-----KSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKV 2607
++A ++P + PV+K + KSRDPRLR + +A+ +LN P+ PKV
Sbjct: 498 TTANNSAPASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNAL--NLNHQPAPILHNAPKV 555
Query: 2606 EPLG-MMSSRKQKTFDEPVLYGPASKRQRNNLHA---------VTGTGGWLEDRGTVGMQ 2457
EP+G +MSSRKQKT +EPVL GPA KRQRN + G+GGWLED Q
Sbjct: 556 EPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQ 615
Query: 2456 VKNGSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPIMSP 2277
+ N + +S NG TSPITS
Sbjct: 616 IMNRNLLVDSAESNSRKLD------------NG--------------ATSPITS----GT 645
Query: 2276 PTSLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKM 2097
P + + P P T P+ T SL +LLKDIA NP++ +NILKM
Sbjct: 646 PNVVVSGNEPA------------------PATTPSTTVSLPALLKDIAVNPTMLLNILKM 687
Query: 2096 ---------EQLKSVDSIKSMTLPPNSNSILGAVPSIKVSPSNSPVPGHISAGLLKTPMQ 1944
Q KS DS + PP +SI P + V+ S I +G+L PM
Sbjct: 688 GQQQKLAADAQQKSNDSSMNTMHPPIPSSI----PPVSVTCS-------IPSGILSKPM- 735
Query: 1943 AISTEESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKINPAVG--QGMTSSLGAQMQED 1770
+E GKVRMKPRDPRR LH Q+ S+G + P+ QG +L Q Q
Sbjct: 736 ----DELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGPSAPCTQGSKENLNFQKQLG 791
Query: 1769 QLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGKM 1590
+ KPV S + PDIT+QFT NLK+IAD + Q+ G
Sbjct: 792 APEAKPVLSQSVLQPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSPIQPGQIKSGA- 850
Query: 1589 KTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEGFDDQQKAAXXXXXXXXX 1410
K +V+ + ++G G S E + PQ+AWGDVEHLFEG+DDQQKAA
Sbjct: 851 DMKAVVTNHDDKQTGTG-SGPEAGPVGAHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRL 909
Query: 1409 XXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHM 1230
QK MF ARK LNSAKF EVDP+HDE+LRKKEEQDREKPHRHLFRFPHM
Sbjct: 910 EEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHM 969
Query: 1229 GMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGD 1050
GMWTKLRPGIW FLE+ASKL+E+HLYTMGNK YATEMAK+LDPKG LFAGRV+SRGDDGD
Sbjct: 970 GMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD 1029
Query: 1049 SFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLP 870
FD ++RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI VERY YFPCSRRQFGL
Sbjct: 1030 PFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLL 1089
Query: 869 GPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVRNILASEQHKILSGCRI 690
GPSLLEIDHDER EDGTLASSL VIER+H+ FF+HQSLD+ DVRNILA+EQ KIL+GCRI
Sbjct: 1090 GPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRI 1149
Query: 689 LFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFV 510
+FSRVFPVGE NPH+HPLWQTAEQFGAVCT ID+QVTHVVANSLGTDKVNWA STGRFV
Sbjct: 1150 VFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFV 1209
Query: 509 VHPGWVEASALLYRRANEQDFAIK 438
VHPGWVEASALLYRRANEQDFAIK
Sbjct: 1210 VHPGWVEASALLYRRANEQDFAIK 1233
>ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X2 [Gossypium raimondii]
Length = 1251
Score = 1012 bits (2616), Expect = 0.0
Identities = 623/1300 (47%), Positives = 761/1300 (58%), Gaps = 52/1300 (4%)
Frame = -2
Query: 4181 TGARVWTMRDLYNYQITSRNY-SGLYSLAWAQAVNNKPLDEVLVLA---EXXXXXXXXXX 4014
+ +RVWTM+DL Y R Y SGLY+ AWAQAV NKPL+++ V +
Sbjct: 51 SNSRVWTMQDLCKYPSVIRGYASGLYNFAWAQAVQNKPLNDIFVKELEQQPQQDENNNSK 110
Query: 4013 XXXXXXXXNLKRMESECVESAGIVSKVVID----------MXXXXXXXXXXXXXXEIDLD 3864
+ E S +VVID EIDLD
Sbjct: 111 RSSPSSSVASVNSKEEKGYSGNSADRVVIDDDTGDEMEEDKIVNLDKEEGELEEGEIDLD 170
Query: 3863 SEVV----LGNRDLNMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLC 3696
SE V L + D N+GI +E + K+ +LI+ LE +T +AEKSF+ +C
Sbjct: 171 SEPVKERVLSSEDGNVGISDELE-----------KRVNLIRGVLEGITVIEAEKSFEVVC 219
Query: 3695 LRLRSLVDNLQELVSESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLA 3516
RL++ +++LQ LV E + KD L++L GA+ S F ++N + KEQN ILSRLL+
Sbjct: 220 SRLQNALESLQGLVFEYGVPTKDTLIELALGAVN---SAFVALNSNLKEQNVSILSRLLS 276
Query: 3515 YVTSLKVPLFSFYQLKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDN 3336
V PLF ++K++ V S++ A +++ + D D L +N
Sbjct: 277 VVKGFDPPLFPLDKMKEIEVMLLSLNSPARAIDSEKEIKIVNKK--------DPDALAEN 328
Query: 3335 ANNVSTCLKKSGIESMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADS 3156
+ T E LK V N ++KGL PLLDLHKDHDADS
Sbjct: 329 VGHDLT------------------------EALKPGVPNFRNKGLSLPLLDLHKDHDADS 364
Query: 3155 LPSPTRETSPPLPFDKGFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQK 2976
LPSPTRET+P LP + G G+V+ + + + + E MHP ETDA+KAFS+YQ+K
Sbjct: 365 LPSPTRETTPCLPVLRPLTTGDGMVRSGFMMAKGLPDAERNKMHPYETDALKAFSSYQRK 424
Query: 2975 FGRNSIFMSDKLPSPTPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVADM 2796
FGR S F SD+LPSPTPSE+ + D GGEVSSSS N P N ++G VSS +
Sbjct: 425 FGRGSFFSSDRLPSPTPSEESGDEGCDTGGEVSSSSSIGNFKP-NLPVMGHPIVSSAPHI 483
Query: 2795 DIISGQVHSSAR-TTSPMTPWPTP----VLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLP 2631
D S + TT TP +L +SAKSRDPRLR N + A DLN+ L
Sbjct: 484 DSASSTSSMQGQFTTQNATPVTVSSASNILSKASAKSRDPRLRFANSNVSALDLNQRPLH 543
Query: 2630 MASTDPKVEPLGMMSSRKQKTFDEPVLYGPASKRQRNNLH--------AVTGTGGWLEDR 2475
AS P V G+M RK+K+ +EPVL GPA KRQ+N L AV+G GGWLED
Sbjct: 544 NASKVPPVS--GIMDPRKKKSTEEPVLDGPAPKRQKNELENFGVRDVQAVSGNGGWLEDT 601
Query: 2474 GTVGMQVKNGSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITS 2295
Q +T+ +
Sbjct: 602 DNCESQ-----------------------------------------------ITNRNQT 614
Query: 2294 LPIMSPPTSLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIW 2115
+ + + G S +G + K +P+T +N SL +LLKDIA NP++
Sbjct: 615 METLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTGMSNP-SLPALLKDIAVNPTML 673
Query: 2114 MNILKM---------EQLKSVDSIKSMTLPPNSNSILGAVPSIKV--SPSNSPVPGHISA 1968
+NILKM Q K+ D +K+ P+SN +LG +P V SPS + VP S+
Sbjct: 674 INILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVLGVIPPANVIPSPSVNVVPSS-SS 732
Query: 1967 GLLKTP---MQAISTEESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKIN---PAVG-Q 1809
G L P +Q +ES K+RMKPRDPRR LH QK SVG DQ K N PA Q
Sbjct: 733 GTLSKPAGNLQGPPLDESCKIRMKPRDPRRVLHGNVLQKSGSVGPDQLKTNGTSPASSTQ 792
Query: 1808 GMTSSLGAQMQ-EDQLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXX 1632
G ++ AQ Q E+Q++ KP+ + PPDI +QFT +LKNIA ++
Sbjct: 793 GSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQSLKNIAGMMSGPQSFAGLPAVSQ 852
Query: 1631 XXXXXXXQVYQ--GKMKTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEGF 1458
QV TKG S S + ++G G + + QNAWGDVEHLFE +
Sbjct: 853 NLVSQPIQVKSETADKNTKG--SNSEDQQTGTGTAPEAGVTCPPPSQNAWGDVEHLFEKY 910
Query: 1457 DDQQKAAXXXXXXXXXXXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEE 1278
DD+QKAA QK MF ARK LNSAKF+EVDP+H+E+LRKKEE
Sbjct: 911 DDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKKEE 970
Query: 1277 QDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPK 1098
QDREKP RHLFRF HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPK
Sbjct: 971 QDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPK 1030
Query: 1097 GELFAGRVVSRGDDGDSFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAV 918
G LFAGRV+SRGDDGD FD ++RVP+SKDLEGVLGMES+VVIIDDSVRVWPHNKLNLI V
Sbjct: 1031 GVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVV 1090
Query: 917 ERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVR 738
ERY YFPCSRRQFGL GPSLLEIDHDERPEDGTLASSLAVIERIH+ FF+HQ+LD+ DVR
Sbjct: 1091 ERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFSHQNLDDLDVR 1150
Query: 737 NILASEQHKILSGCRILFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANS 558
NILA+EQ KILSGCRI+FSRVFPVGE NPH+HPLWQTAEQFGAVCTNQIDE VTHVVANS
Sbjct: 1151 NILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVANS 1210
Query: 557 LGTDKVNWAFSTGRFVVHPGWVEASALLYRRANEQDFAIK 438
LGTDKVNWA STG+FVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1211 LGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAIK 1250
>gb|KDO83166.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
Length = 1218
Score = 1007 bits (2604), Expect = 0.0
Identities = 611/1276 (47%), Positives = 757/1276 (59%), Gaps = 26/1276 (2%)
Frame = -2
Query: 4187 GGTGARVWTMRDLYN-YQITSRNYS-GLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXX 4014
G ARVWTMRDLYN Y R Y GL++LAWAQAV NKPL+E+ V+
Sbjct: 46 GEAAARVWTMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSS 105
Query: 4013 XXXXXXXXNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEVVLGNRDL 3834
N + + +V KVVID + E+ G +L
Sbjct: 106 PASSVASVNSGAAAGK--DDKKVVEKVVIDDSGDEIEKE----------EGELEEGEIEL 153
Query: 3833 NMGIENEAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELV 3654
++ E+ K + E++ + I++ LES+ D SF+G+C +L +++L+ELV
Sbjct: 154 DLESESNEKVSEQVKEEMKLINVESIREALESVLRGDI--SFEGVCSKLEFTLESLRELV 211
Query: 3653 SESLIAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVPLFSFYQ 3474
+E+ + KDAL+QL F A+Q V+SVFCSMN KEQN++ILSRLL+ + S + PLFS Q
Sbjct: 212 NENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSLIKSHEPPLFSSNQ 271
Query: 3473 LKKMGVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKKSGIE 3294
+K+M SS+ A + DS+++ +NA N +K +
Sbjct: 272 IKEMEAMLSSLVTRANDKEKDMLAMHGVN-------GKDSNIVTENAVNDLNFKEKVPLP 324
Query: 3293 SMSTGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPF 3114
S + LE K + +G++ PLLD HK HD DSLPSPTRET+P +P
Sbjct: 325 VDSLMQNK------PLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPV 378
Query: 3113 DKGFVLGHGLVKPEWPVPRQTLERENVIMHPN-ETDAVKAFSTYQQKFGRNSIFMSDKLP 2937
+ V+G G+VK W + V P+ ETDA++AFS+YQQKFGRNS FM+ +LP
Sbjct: 379 QRALVVGDGMVK-SWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELP 437
Query: 2936 SPTPSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVA-----DMDIISGQVH 2772
SPTPSE+ +GD D GGE+SS++ P+N +GQ VSS MDI S Q
Sbjct: 438 SPTPSEESGDGDGDTGGEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQAL 497
Query: 2771 SSARTTSPMTPWPTPVLKSSSA-----KSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKV 2607
++A ++P + PV+K + KSRDPRLR + +A+ +LN P+ PKV
Sbjct: 498 TTANNSAPASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNAL--NLNHQPAPILHNAPKV 555
Query: 2606 EPLG-MMSSRKQKTFDEPVLYGPASKRQRNNLHA---------VTGTGGWLEDRGTVGMQ 2457
EP+G +MSSRKQKT +EPVL GPA KRQRN + G+GGWLED Q
Sbjct: 556 EPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQ 615
Query: 2456 VKNGSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPIMSP 2277
+ N + +S NG TSPITS
Sbjct: 616 IMNRNLLVDSAESNSRKLD------------NG--------------ATSPITS----GT 645
Query: 2276 PTSLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKM 2097
P + + P P T P+ T SL +LLKDIA NP++ +NILKM
Sbjct: 646 PNVVVSGNEPA------------------PATTPSTTVSLPALLKDIAVNPTMLLNILKM 687
Query: 2096 -EQLKSVDSIKSMTLPPNSNSILGAVPSIKVSPSNSPVPGHISAGLLKTPMQAISTEESG 1920
+Q K + + + N++ +PS +I +E G
Sbjct: 688 GQQQKLAADAQQKSNDSSMNTMHPPIPS------------------------SIPPDELG 723
Query: 1919 KVRMKPRDPRRFLHNGTSQKGWSVGSDQPKINPAVG--QGMTSSLGAQMQEDQLDRKPVS 1746
KVRMKPRDPRR LH Q+ S+G + P+ QG +L Q Q + KPV
Sbjct: 724 KVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVL 783
Query: 1745 SNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGKMKTKGLVSE 1566
S + PDIT+QFT NLK+IAD + Q+ G K +V+
Sbjct: 784 SQSVLQPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSPIQPGQIKSGA-DMKAVVTN 842
Query: 1565 SSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEGFDDQQKAAXXXXXXXXXXXQKNMFG 1386
+ ++G G S E + PQ+AWGDVEHLFEG+DDQQKAA QK MF
Sbjct: 843 HDDKQTGTG-SGPEAGPVGAHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFS 901
Query: 1385 ARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRP 1206
ARK LNSAKF EVDP+HDE+LRKKEEQDREKPHRHLFRFPHMGMWTKLRP
Sbjct: 902 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRP 961
Query: 1205 GIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGDSFDSEDRV 1026
GIW FLE+ASKL+E+HLYTMGNK YATEMAK+LDPKG LFAGRV+SRGDDGD FD ++RV
Sbjct: 962 GIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERV 1021
Query: 1025 PKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLPGPSLLEID 846
PKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI VERY YFPCSRRQFGL GPSLLEID
Sbjct: 1022 PKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEID 1081
Query: 845 HDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVRNILASEQHKILSGCRILFSRVFPV 666
HDER EDGTLASSL VIER+H+ FF+HQSLD+ DVRNILA+EQ KIL+GCRI+FSRVFPV
Sbjct: 1082 HDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVFSRVFPV 1141
Query: 665 GETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFVVHPGWVEA 486
GE NPH+HPLWQTAEQFGAVCT ID+QVTHVVANSLGTDKVNWA STGRFVVHPGWVEA
Sbjct: 1142 GEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEA 1201
Query: 485 SALLYRRANEQDFAIK 438
SALLYRRANEQDFAIK
Sbjct: 1202 SALLYRRANEQDFAIK 1217
>ref|XP_011020855.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Populus euphratica]
Length = 1271
Score = 1006 bits (2602), Expect = 0.0
Identities = 616/1282 (48%), Positives = 762/1282 (59%), Gaps = 37/1282 (2%)
Frame = -2
Query: 4172 RVWTMRDLYNYQITSRNYSGLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXXXXXX 3993
+VWT+RDLY YQ+ SGLY+LAWAQAV NKPL+E+ V E
Sbjct: 62 KVWTVRDLYKYQVGGGYMSGLYNLAWAQAVQNKPLNELFVEVEVDDSSK----------- 110
Query: 3992 XNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEV-VLGNRDLNMGIEN 3816
K S S S VVID ID++ E L ++++ E
Sbjct: 111 ---KSSVSSVNSSKEDKSTVVID-----DSGDEMDVVKVIDIEKEEGELEEGEIDLDSEG 162
Query: 3815 EAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELV--SESL 3642
+++ G V+ EK+ I+++LES++A EKSF+ +CL+L + +++L+ELV +E+
Sbjct: 163 KSEGGMVS-VDTEKR-VKSIREDLESVSAIKDEKSFEAVCLKLHNALESLKELVRVNENG 220
Query: 3641 IAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVPLFSFYQLKKM 3462
KD+LV+LLF AI V S F SMNQ KEQN+ + R L+ V S FS K++
Sbjct: 221 FPSKDSLVRLLFTAIGAVNSYFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEI 280
Query: 3461 GVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKK--SGIESM 3288
+ SS+D + L+ ++V D+D L NA T + + S ES
Sbjct: 281 ELMVSSLDSHDI-LSSSSAGEERETQVSGKVNERDNDSLSKNAGYDLTTMNRLPSAAESF 339
Query: 3287 STGSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPFDK 3108
N+ S+E K V + + +G++ PLLDL K HD DSLPSPTRET+P P +
Sbjct: 340 VH-----NKPNFSIEPPKPGVPSFRSRGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQR 394
Query: 3107 GFVLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFMSDKLPSPT 2928
+G G++ PVP+ E +HP ETDA+KA S+YQQKF RNS F +++LPSPT
Sbjct: 395 LLPIGDGMISSGLPVPKVASITEEPRVHPYETDALKAVSSYQQKFNRNS-FFTNELPSPT 453
Query: 2927 PSEDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVS-----------SVADMDIISG 2781
PSE+ NGD DI GEV SSS+ N +N + + + S ++
Sbjct: 454 PSEESGNGDGDIAGEV-SSSLTANYRTVNPPVSERKSASPSPPPPPPPPPPPPHLNNSCI 512
Query: 2780 QVHSSARTTSPMTPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKVEP 2601
+V R ++P++ + K +SAKSRDPRLR VN D A D N+ L M + P+ EP
Sbjct: 513 RVVIPTRDSAPVSSGTSSTAK-ASAKSRDPRLRYVNTDVSALDQNQRTLLMVNNPPRAEP 571
Query: 2600 LGMMSSRKQKTFDEPVLYGPASKRQRN---------NLHAVTGTGGWLEDRGTVGMQVKN 2448
G ++ +++ +E VL G + KRQRN ++ ++TGTGGWLED Q N
Sbjct: 572 SGAIAGSRKQKIEEDVLDGTSLKRQRNSFDNFGGVRDIRSMTGTGGWLEDTDMAEPQTVN 631
Query: 2447 GSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPIMSPPTS 2268
+ + E Q + P T + S S
Sbjct: 632 KNQ-----------------------RAENAEPGQRINNGVVRPSTGSVMSNVNCSGNVQ 668
Query: 2267 LPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKM--- 2097
+P G T V G T T SL LLKDI NP++ +NILKM
Sbjct: 669 VPVMGINT------------VAGSEQAPVTSTTTASLPDLLKDITVNPTLLINILKMGQQ 716
Query: 2096 ------EQLKSVDSIKSMTLPPNSNSILGAVPSIKVSPSNSPVPGHISAGLLKTPMQAIS 1935
Q K D KS + PP+S+S+ GA P + S SAG + P Q +
Sbjct: 717 QRLALDGQQKLADPAKSTSHPPSSSSVPGATPEVNAVSSQPSGILPRSAGKAQVPSQVAT 776
Query: 1934 TEESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKIN--PAVGQGMTSSLGAQMQEDQLD 1761
T+ESGK+RMKPRDPRR LHN Q+ S+GS+Q K + QG + Q QE +
Sbjct: 777 TDESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLTSTTQGTKDNQNLQKQEGLAE 836
Query: 1760 RKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGKMKTK 1581
PV PPDI+ FT +L+NIADIV Q+ ++ K
Sbjct: 837 LNPV-----VPPDISSSFTKSLQNIADIVSVSQTCTTPPFVSQNVASQPVQIKSDRVDGK 891
Query: 1580 GLVSESSNLRSGIG-LSSQEMTAALSRPQNAWGDVEHLFEGFDDQQKAAXXXXXXXXXXX 1404
+ +SN +G SS E+ AA S QN W DVEHLFEG+DDQQKAA
Sbjct: 892 ---TGTSNSDQKMGPASSPEVVAASSLSQNTWEDVEHLFEGYDDQQKAAIQRERARRIEE 948
Query: 1403 QKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPHMGM 1224
QK +F ARK LNSAKFVEVDP+HDE+LRKKEEQDREKP+RHLFRFPHMGM
Sbjct: 949 QKKLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMGM 1008
Query: 1223 WTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDGDSF 1044
WTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LFAGRVVSRGDDGD
Sbjct: 1009 WTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDGDLL 1068
Query: 1043 DSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLPGP 864
D ++RVPKSKDLEGVLGMES VVIIDDS+RVWPHNKLNLI VERYIYFPCSRRQFGLPGP
Sbjct: 1069 DGDERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQFGLPGP 1128
Query: 863 SLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVRNILASEQHKILSGCRILF 684
SLLEIDHD+RPEDGTLA SLAVIERIH+ FF H SLDEADVRNIL+SEQ KIL+GCR++F
Sbjct: 1129 SLLEIDHDQRPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILSSEQRKILAGCRVVF 1188
Query: 683 SRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRFVVH 504
SRVFPVGE NPH+HPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWA STGRFVVH
Sbjct: 1189 SRVFPVGEVNPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVH 1248
Query: 503 PGWVEASALLYRRANEQDFAIK 438
PGWVEASALLYRRANEQ+FAIK
Sbjct: 1249 PGWVEASALLYRRANEQEFAIK 1270
>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343308|gb|EEE79627.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1247
Score = 998 bits (2581), Expect = 0.0
Identities = 615/1285 (47%), Positives = 752/1285 (58%), Gaps = 40/1285 (3%)
Frame = -2
Query: 4172 RVWTMRDLYNYQITSRNYSGLYSLAWAQAVNNKPLDEVLVLAEXXXXXXXXXXXXXXXXX 3993
+VWT+RDLY YQ+ SGLY+LAWAQAV NKPL+E+ V E
Sbjct: 64 KVWTVRDLYKYQVGGGYMSGLYNLAWAQAVQNKPLNELFVEVEVDDSSQ----------- 112
Query: 3992 XNLKRMESECVESAGIVSKVVIDMXXXXXXXXXXXXXXEIDLDSEV-VLGNRDLNMGIEN 3816
K S S VVID ID++ E L ++++ E
Sbjct: 113 ---KSSVSSVNSSKEDKRTVVID-----DSGDEMDVVKVIDIEKEEGELEEGEIDLDSEG 164
Query: 3815 EAKPGSKEYVELEKKQFDLIKKELESLTAADAEKSFDGLCLRLRSLVDNLQELV--SESL 3642
+++ G V+ EK+ I+++LES++ +KSF+ +CL+L + +++L+ELV +E+
Sbjct: 165 KSEGGMVS-VDTEKR-VKSIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENG 222
Query: 3641 IAEKDALVQLLFGAIQIVYSVFCSMNQSKKEQNRDILSRLLAYVTSLKVPLFSFYQLKKM 3462
KD+LV+LLF AI V S F SMNQ KEQN+ + R L+ V S FS K++
Sbjct: 223 FPSKDSLVRLLFTAIGAVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEV 282
Query: 3461 GVFRSSMDFSAVSLNLXXXXXXXXSRVGEAPINTDSDVLFDNANNVSTCLKKSGIESMST 3282
F + DF VSL E+ ++
Sbjct: 283 CDF-CNFDFRIVSLCYDLTTMNRLPSAAESFVH--------------------------- 314
Query: 3281 GSSGLNECRVSLECLKSLVGNAKHKGLVFPLLDLHKDHDADSLPSPTRETSPPLPFDKGF 3102
N+ S+E K V + K +G++ PLLDL K HD DSLPSPTRET+P P +
Sbjct: 315 -----NKPNFSIEPPKPGVPSFKSRGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLL 369
Query: 3101 VLGHGLVKPEWPVPRQTLERENVIMHPNETDAVKAFSTYQQKFGRNSIFMSDKLPSPTPS 2922
+G G++ PVP+ E +HP ETDA+KA S+YQ+KF NS F +++LPSPTPS
Sbjct: 370 PIGDGMISSGLPVPKVASITEEPRVHPYETDALKAVSSYQKKFNLNSFF-TNELPSPTPS 428
Query: 2921 EDGDNGDVDIGGEVSSSSIPRNIVPLNTSIVGQSTVSSVAD--------------MDIIS 2784
E+ NGD D GEVSSSS N +N + + + S ++ S
Sbjct: 429 EESGNGDGDTAGEVSSSSTV-NYRTVNPPVSDRKSASPSPSPPPPPPPPPPPPPHLNNSS 487
Query: 2783 GQVHSSARTTSPMTPWPTPVLKSSSAKSRDPRLRLVNFDAVAGDLNKSLLPMASTDPKVE 2604
+V R ++P++ + +K+S AKSRDPRLR VN DA A D N+ L M + P+ E
Sbjct: 488 IRVVIPTRNSAPVSSGTSSTVKAS-AKSRDPRLRYVNTDASALDQNQRTLLMVNNPPRAE 546
Query: 2603 PLGMMSSRKQKTFDEPVLYGPASKRQRNN---------LHAVTGTGGWLEDRGTVGMQVK 2451
P G ++ +++ +E VL G + KRQRN+ + ++TGTGGWLED Q
Sbjct: 547 PSGAIAGSRKQKIEEDVLDGTSLKRQRNSFDNFGVVRDIRSMTGTGGWLEDTDMAEPQTV 606
Query: 2450 NGSSGTVLRKSEDXXXXXXXXXXXXXVKGNGNEKFQVVGPCTTLPVTSPITSLPIMSPPT 2271
N + E Q + P T + S S
Sbjct: 607 NKNQWA-----------------------ENAEPGQRINNGVVCPSTGSVMSSVSCSGNV 643
Query: 2270 SLPATGPPTSLAATGPFTSLPVKGPTLPVTDPTNTTSLHSLLKDIAGNPSIWMNILKMEQ 2091
+P G T + PVT T T SL LLKDI NP++ +NILKM Q
Sbjct: 644 QVPVMGINTIAGSE-----------QAPVTS-TTTASLPDLLKDITVNPTMLINILKMGQ 691
Query: 2090 L---------KSVDSIKSMTLPPNSNSILGAVPSIKVSPSNSPVPGHI---SAGLLKTPM 1947
K D KS + PP+SN++LGA+P + S +P I SAG + P
Sbjct: 692 QQRLALDGQQKLADPAKSTSHPPSSNTVLGAIPEVNAVSS---LPSGILPRSAGKAQGPS 748
Query: 1946 QAISTEESGKVRMKPRDPRRFLHNGTSQKGWSVGSDQPKINPAVG--QGMTSSLGAQMQE 1773
Q +T+ESGK+RMKPRDPRR LHN Q+ S+GS+Q K QG + Q QE
Sbjct: 749 QIATTDESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLTSTTQGTKDNQNLQKQE 808
Query: 1772 DQLDRKPVSSNLIAPPDITRQFTTNLKNIADIVXXXXXXXXXXXXXXXXXXXXXQVYQGK 1593
+ KPV PPDI+ FT +LKNIADIV Q+ +
Sbjct: 809 GLAELKPV-----VPPDISSPFTKSLKNIADIVSVSQTCTTPPFVSQNVASQPVQIKSDR 863
Query: 1592 MKTKGLVSESSNLRSGIGLSSQEMTAALSRPQNAWGDVEHLFEGFDDQQKAAXXXXXXXX 1413
+ K +S S SS E+ AA S QN W DVEHLFEG+DDQQKAA
Sbjct: 864 VDGKTGISNSDQKMGPA--SSPEVVAASSLSQNTWEDVEHLFEGYDDQQKAAIQRERARR 921
Query: 1412 XXXQKNMFGARKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPHRHLFRFPH 1233
QK +F ARK LNSAKFVEVDP+HDE+LRKKEEQDREKP+RHLFRFPH
Sbjct: 922 IEEQKKLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPH 981
Query: 1232 MGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFAGRVVSRGDDG 1053
MGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LFAGRVVSRGDDG
Sbjct: 982 MGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDG 1041
Query: 1052 DSFDSEDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGL 873
D D ++RVPKSKDLEGVLGMES VVIIDDS+RVWPHNKLNLI VERYIYFPCSRRQFGL
Sbjct: 1042 DLLDGDERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQFGL 1101
Query: 872 PGPSLLEIDHDERPEDGTLASSLAVIERIHEAFFAHQSLDEADVRNILASEQHKILSGCR 693
PGPSLLEIDHDERPEDGTLA SLAVIERIH+ FF H SLDEADVRNILASEQ KIL+GCR
Sbjct: 1102 PGPSLLEIDHDERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILASEQRKILAGCR 1161
Query: 692 ILFSRVFPVGETNPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWAFSTGRF 513
I+FSRVFPVGE NPH+HPLWQ+AEQFGAVCTNQIDEQVTHVVANSLGTDKVNWA STGRF
Sbjct: 1162 IVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRF 1221
Query: 512 VVHPGWVEASALLYRRANEQDFAIK 438
VVHPGWVEASALLYRRANEQDFAIK
Sbjct: 1222 VVHPGWVEASALLYRRANEQDFAIK 1246