BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00004987
         (1954 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011074171.1| PREDICTED: RNA pseudouridine synthase 3, mit...   768   0.0  
ref|XP_012840385.1| PREDICTED: RNA pseudouridine synthase 3, mit...   750   0.0  
gb|EYU34909.1| hypothetical protein MIMGU_mgv1a006040mg [Erythra...   741   0.0  
ref|XP_012854072.1| PREDICTED: RNA pseudouridine synthase 3, mit...   737   0.0  
ref|XP_012853147.1| PREDICTED: RNA pseudouridine synthase 3, mit...   732   0.0  
ref|XP_010263262.1| PREDICTED: RNA pseudouridine synthase 3, mit...   716   0.0  
ref|XP_007023655.1| Pseudouridine synthase family protein [Theob...   714   0.0  
gb|EYU23584.1| hypothetical protein MIMGU_mgv1a026780mg, partial...   713   0.0  
emb|CDO98596.1| unnamed protein product [Coffea canephora]            711   0.0  
ref|XP_002267010.1| PREDICTED: RNA pseudouridine synthase 3, mit...   707   0.0  
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              700   0.0  
ref|XP_012444478.1| PREDICTED: RNA pseudouridine synthase 3, mit...   697   0.0  
ref|XP_009620200.1| PREDICTED: RNA pseudouridine synthase 3, mit...   696   0.0  
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   695   0.0  
ref|XP_009804022.1| PREDICTED: RNA pseudouridine synthase 3, mit...   694   0.0  
ref|XP_012092035.1| PREDICTED: RNA pseudouridine synthase 3, mit...   685   0.0  
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   684   0.0  
gb|KHG09609.1| hypothetical protein F383_12972 [Gossypium arboreum]   684   0.0  
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   682   0.0  
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit...   681   0.0  

>ref|XP_011074171.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Sesamum
            indicum]
          Length = 475

 Score =  768 bits (1984), Expect = 0.0
 Identities = 372/476 (78%), Positives = 418/476 (87%)
 Frame = -3

Query: 1484 MRKTFLNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPP 1305
            MRK FLN+ +L A R  S+++IRPP PA +  +IRV+NN+AHLG PKEGPKP+QLLSLPP
Sbjct: 1    MRKKFLNQAVLSAVRRTSKSKIRPPPPASSPDVIRVTNNIAHLGRPKEGPKPRQLLSLPP 60

Query: 1304 FPGHPLPGRKSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKG 1125
            FPGH LPGRKS SA HVTAISWLKYYFDDIPPP+IQSHFNKGLVQME +DS   S  H+G
Sbjct: 61   FPGHSLPGRKSTSAEHVTAISWLKYYFDDIPPPLIQSHFNKGLVQMESLDSRGPSGCHQG 120

Query: 1124 QPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYK 945
            Q  SM K+KH +V+EVGARVYVPVSV E +ISKRFDVIPSGTL PNADEIEYL+RLVKYK
Sbjct: 121  QTDSMRKLKHSDVMEVGARVYVPVSVAECKISKRFDVIPSGTLYPNADEIEYLRRLVKYK 180

Query: 944  DSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 765
            DSAILVLNKPPKLPVKGN+ VHNSMD      L+YDYDEGPKLVHRLDRESSGLLLMGR+
Sbjct: 181  DSAILVLNKPPKLPVKGNLSVHNSMDALAAAALTYDYDEGPKLVHRLDRESSGLLLMGRS 240

Query: 764  EESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLD 585
             ESISYL WLF+D +K +S+S+ WNDACE  YQRYWALVIG PK+KEGLIC PLTKVLL+
Sbjct: 241  RESISYLQWLFNDGRKAESLSEDWNDACEAMYQRYWALVIGLPKQKEGLICTPLTKVLLN 300

Query: 584  NGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGT 405
            +GKTERV+LA+NS LEA+QEAITEYRVLGP INGCSWIELRP T RKHQLRVHCAEALGT
Sbjct: 301  DGKTERVVLAHNSCLEAAQEAITEYRVLGPTINGCSWIELRPHTRRKHQLRVHCAEALGT 360

Query: 404  PIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRE 225
            PIVGDY+YGWF+H RWKQMPRVDFEPTTGEPYK+RRPEGLDVQKGSVLSKVPLLHLHCRE
Sbjct: 361  PIVGDYKYGWFVHKRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVLSKVPLLHLHCRE 420

Query: 224  LVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            +VLPNIAKF++LH+ +    Y+ +  ++ +PD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 421  MVLPNIAKFIVLHKQQLG-GYRVNPEHDLKPDVLRFVAPMPSHMKISWNLMSSYLV 475


>ref|XP_012840385.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
            [Erythranthe guttatus] gi|848908360|ref|XP_012853148.1|
            PREDICTED: RNA pseudouridine synthase 3,
            mitochondrial-like isoform X2 [Erythranthe guttatus]
          Length = 475

 Score =  750 bits (1937), Expect = 0.0
 Identities = 363/476 (76%), Positives = 408/476 (85%)
 Frame = -3

Query: 1484 MRKTFLNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPP 1305
            MR   LNR  +    H  R++IRPP PA AKA++RVSNN+AHLG PKEGPKP+QLLSLPP
Sbjct: 1    MRNKLLNRNTISTVWHNRRSKIRPPPPASAKAVLRVSNNIAHLGAPKEGPKPRQLLSLPP 60

Query: 1304 FPGHPLPGRKSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKG 1125
            FPG+PLPGR S S  HVTAISWLKYYFDD+ PPVIQ HFNKGLV+MEC++S+  S S++G
Sbjct: 61   FPGNPLPGRNSTSVEHVTAISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYRG 120

Query: 1124 QPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYK 945
            Q +S  KIK  E++E G RVYVPVSV E+++SKRFDVIPSGTL PNADEI YLQRLVKYK
Sbjct: 121  QTMSTRKIKPSEIVEEGDRVYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRLVKYK 180

Query: 944  DSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 765
            DSAILVLNKPPKLPVKGN+PVHNSMD      LSYDYDEGPKLVHRLDRESSGLLLMGRT
Sbjct: 181  DSAILVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGRT 240

Query: 764  EESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLD 585
            +ESISYLHWLFSDV+K  S SK W+DAC+  YQRYWALVIG P +KEG+ICAPLTKVLL+
Sbjct: 241  KESISYLHWLFSDVRKAASFSKEWSDACDAMYQRYWALVIGVPNQKEGVICAPLTKVLLN 300

Query: 584  NGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGT 405
            +GKTE V+L++NS LEASQEAIT YRVLGPMINGCSWIEL P T RKHQLRVHCAEALGT
Sbjct: 301  DGKTEMVILSHNSGLEASQEAITRYRVLGPMINGCSWIELHPLTRRKHQLRVHCAEALGT 360

Query: 404  PIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRE 225
            PIVGDY+YGWF+H++WKQMPR+DFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLH RE
Sbjct: 361  PIVGDYKYGWFVHSKWKQMPRLDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHSRE 420

Query: 224  LVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            +VLPNI KF+ LH++ S  NY  D    ++PD+LRFV  MP HMKISWNLMSSYLV
Sbjct: 421  MVLPNIEKFIELHKHMSG-NYNVDPELCAKPDILRFVVPMPKHMKISWNLMSSYLV 475


>gb|EYU34909.1| hypothetical protein MIMGU_mgv1a006040mg [Erythranthe guttata]
          Length = 460

 Score =  741 bits (1914), Expect = 0.0
 Identities = 357/459 (77%), Positives = 402/459 (87%)
 Frame = -3

Query: 1433 SRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPPFPGHPLPGRKSASAYHV 1254
            +R++IRPP PA AKA++RVSNN+AHLG PKEGPKP+QLLSLPPFPG+PLPGR S S  HV
Sbjct: 3    TRSKIRPPPPASAKAVLRVSNNIAHLGAPKEGPKPRQLLSLPPFPGNPLPGRNSTSVEHV 62

Query: 1253 TAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKGQPLSMIKIKHYEVIEVG 1074
            TAISWLKYYFDD+ PPVIQ HFNKGLV+MEC++S+  S S++GQ +S  KIK  E++E G
Sbjct: 63   TAISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYRGQTMSTRKIKPSEIVEEG 122

Query: 1073 ARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYKDSAILVLNKPPKLPVKG 894
             RVYVPVSV E+++SKRFDVIPSGTL PNADEI YLQRLVKYKDSAILVLNKPPKLPVKG
Sbjct: 123  DRVYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRLVKYKDSAILVLNKPPKLPVKG 182

Query: 893  NMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRTEESISYLHWLFSDVKKG 714
            N+PVHNSMD      LSYDYDEGPKLVHRLDRESSGLLLMGRT+ESISYLHWLFSDV+K 
Sbjct: 183  NLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKESISYLHWLFSDVRKA 242

Query: 713  KSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLDNGKTERVMLANNSVLEA 534
             S SK W+DAC+  YQRYWALVIG P +KEG+ICAPLTKVLL++GKTE V+L++NS LEA
Sbjct: 243  ASFSKEWSDACDAMYQRYWALVIGVPNQKEGVICAPLTKVLLNDGKTEMVILSHNSGLEA 302

Query: 533  SQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGTPIVGDYRYGWFIHNRWK 354
            SQEAIT YRVLGPMINGCSWIEL P T RKHQLRVHCAEALGTPIVGDY+YGWF+H++WK
Sbjct: 303  SQEAITRYRVLGPMINGCSWIELHPLTRRKHQLRVHCAEALGTPIVGDYKYGWFVHSKWK 362

Query: 353  QMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLLLHRNKS 174
            QMPR+DFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLH RE+VLPNI KF+ LH++ S
Sbjct: 363  QMPRLDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHSREMVLPNIEKFIELHKHMS 422

Query: 173  AVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
              NY  D    ++PD+LRFV  MP HMKISWNLMSSYLV
Sbjct: 423  G-NYNVDPELCAKPDILRFVVPMPKHMKISWNLMSSYLV 460


>ref|XP_012854072.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
            [Erythranthe guttatus] gi|848911213|ref|XP_012854073.1|
            PREDICTED: RNA pseudouridine synthase 3,
            mitochondrial-like [Erythranthe guttatus]
          Length = 475

 Score =  737 bits (1902), Expect = 0.0
 Identities = 359/476 (75%), Positives = 405/476 (85%)
 Frame = -3

Query: 1484 MRKTFLNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPP 1305
            MR   LN++ +    H  R++IRPP PA  KA++RVSNN+AHLG PKEGPKP+QLLSLPP
Sbjct: 1    MRNKLLNQKTISTVWHNRRSKIRPPPPASTKAVLRVSNNIAHLGAPKEGPKPKQLLSLPP 60

Query: 1304 FPGHPLPGRKSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKG 1125
            FPG+PLPGR S S  HVTAISWLKYYFDD+ PPVIQ HFNKGLV+MEC++S+  S S+ G
Sbjct: 61   FPGNPLPGRHSTSVEHVTAISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYTG 120

Query: 1124 QPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYK 945
            Q +S  KIK  E++E G RVYVPVSV E+++SKRFDVIPSGTL PNADEI YLQRLVKYK
Sbjct: 121  QTMSTRKIKPSEIMEEGDRVYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRLVKYK 180

Query: 944  DSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 765
            DSAILVLNKPPKLPVKGN+ VHNSMD      LSYDYDEGPKLVHRLDRESSGLLLMGRT
Sbjct: 181  DSAILVLNKPPKLPVKGNLLVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGRT 240

Query: 764  EESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLD 585
            +ESISYLHWLFSDV+K  S SK W+DAC+  YQRYWALVIG P +KEG+I APLTKVLL+
Sbjct: 241  KESISYLHWLFSDVRKAASFSKEWSDACDAMYQRYWALVIGVPNQKEGVIFAPLTKVLLN 300

Query: 584  NGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGT 405
            +GKTE V+L++NS LEASQEAIT YRVLGPMINGCSWIEL P T RKHQLRVHCAEALGT
Sbjct: 301  DGKTEMVILSHNSGLEASQEAITRYRVLGPMINGCSWIELHPLTRRKHQLRVHCAEALGT 360

Query: 404  PIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRE 225
            PIVGDY+YGWF+H++WKQMPR++FEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLH RE
Sbjct: 361  PIVGDYKYGWFVHSKWKQMPRLNFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHSRE 420

Query: 224  LVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            +VLPNI KF+ LH+ K   NY  D    ++PD+LRFVA MP HMKISWNLMSSYLV
Sbjct: 421  MVLPNIEKFIELHKQKPG-NYNVDPELCAKPDILRFVAPMPKHMKISWNLMSSYLV 475


>ref|XP_012853147.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
            X1 [Erythranthe guttatus]
          Length = 513

 Score =  732 bits (1890), Expect = 0.0
 Identities = 362/514 (70%), Positives = 409/514 (79%), Gaps = 38/514 (7%)
 Frame = -3

Query: 1484 MRKTFLNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPP 1305
            MR   LNR  +    H  R++IRPP PA AKA++RVSNN+AHLG PKEGPKP+QLLSLPP
Sbjct: 1    MRNKLLNRNTISTVWHNRRSKIRPPPPASAKAVLRVSNNIAHLGAPKEGPKPRQLLSLPP 60

Query: 1304 FPGHPLPGRKSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKG 1125
            FPG+PLPGR S S  HVTAISWLKYYFDD+ PPVIQ HFNKGLV+MEC++S+  S S++G
Sbjct: 61   FPGNPLPGRNSTSVEHVTAISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYRG 120

Query: 1124 QPLSM--------------------------------------IKIKHYEVIEVGARVYV 1059
            Q +S                                       ++IK  E++E G RVYV
Sbjct: 121  QTMSTRKVIMLLLESCIKLCSYCYEFEYLLHTQITRFYSCNSYVQIKPSEIVEEGDRVYV 180

Query: 1058 PVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYKDSAILVLNKPPKLPVKGNMPVH 879
            PVSV E+++SKRFDVIPSGTL PNADEI YLQRLVKYKDSAILVLNKPPKLPVKGN+PVH
Sbjct: 181  PVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRLVKYKDSAILVLNKPPKLPVKGNLPVH 240

Query: 878  NSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRTEESISYLHWLFSDVKKGKSMSK 699
            NSMD      LSYDYDEGPKLVHRLDRESSGLLLMGRT+ESISYLHWLFSDV+K  S SK
Sbjct: 241  NSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKESISYLHWLFSDVRKAASFSK 300

Query: 698  AWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLDNGKTERVMLANNSVLEASQEAI 519
             W+DAC+  YQRYWALVIG P +KEG+ICAPLTKVLL++GKTE V+L++NS LEASQEAI
Sbjct: 301  EWSDACDAMYQRYWALVIGVPNQKEGVICAPLTKVLLNDGKTEMVILSHNSGLEASQEAI 360

Query: 518  TEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGTPIVGDYRYGWFIHNRWKQMPRV 339
            T YRVLGPMINGCSWIEL P T RKHQLRVHCAEALGTPIVGDY+YGWF+H++WKQMPR+
Sbjct: 361  TRYRVLGPMINGCSWIELHPLTRRKHQLRVHCAEALGTPIVGDYKYGWFVHSKWKQMPRL 420

Query: 338  DFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLLLHRNKSAVNYK 159
            DFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLH RE+VLPNI KF+ LH++ S  NY 
Sbjct: 421  DFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHSREMVLPNIEKFIELHKHMSG-NYN 479

Query: 158  PDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
             D    ++PD+LRFV  MP HMKISWNLMSSYLV
Sbjct: 480  VDPELCAKPDILRFVVPMPKHMKISWNLMSSYLV 513


>ref|XP_010263262.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nelumbo
            nucifera]
          Length = 474

 Score =  716 bits (1849), Expect = 0.0
 Identities = 357/480 (74%), Positives = 402/480 (83%), Gaps = 4/480 (0%)
 Frame = -3

Query: 1484 MRKTFLNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPP 1305
            MRK  + R ILL  RHYSR  + PPSPA A ++IRVSNN+A LGCPKE PKP+QLLSLPP
Sbjct: 1    MRKYHVFRVILLTVRHYSR--VSPPSPARATSVIRVSNNIARLGCPKEDPKPRQLLSLPP 58

Query: 1304 FPGHPLPGRKSAS----AYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSR 1137
            FPGHPLPG+ S S    + HVTAISW+KYYFDDIP PVIQSHFNKGLV+M C +  +   
Sbjct: 59   FPGHPLPGKSSVSVAGQSAHVTAISWVKYYFDDIPGPVIQSHFNKGLVKMACPNPGDLLM 118

Query: 1136 SHKGQPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRL 957
              +GQ  S+ KI   EV+EVG+R+YVPVSV+E++ISKRFD IPSGTL PNADEIEYLQRL
Sbjct: 119  EEQGQMQSLKKISPNEVMEVGSRIYVPVSVIETKISKRFDTIPSGTLYPNADEIEYLQRL 178

Query: 956  VKYKDSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLL 777
            V YKDSAI+VLNKPPKLPVKGN+PVHNSMD      LSY Y++GPKLVHRLDRESSGLLL
Sbjct: 179  VMYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAEAALSYGYEQGPKLVHRLDRESSGLLL 238

Query: 776  MGRTEESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTK 597
            MGRT+ESI+ LHWLFSDV K KS  K WNDACE T QRYWALVIG P+EK+G ICAPL+K
Sbjct: 239  MGRTKESIARLHWLFSDVNKAKSPLKTWNDACETTTQRYWALVIGSPREKQGRICAPLSK 298

Query: 596  VLLDNGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAE 417
            VLL++GKTERV+LAN S +EASQEAIT++RVLGPMINGC+WIEL P T RKHQLRVHCAE
Sbjct: 299  VLLNDGKTERVILANPSGVEASQEAITDFRVLGPMINGCTWIELCPLTGRKHQLRVHCAE 358

Query: 416  ALGTPIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHL 237
            ALGTPIVGDY+YGW++H +WKQMPRVD EPTTG+PYK+RRPEGLDVQKGSVLSKVPLLHL
Sbjct: 359  ALGTPIVGDYKYGWYVHKKWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHL 418

Query: 236  HCRELVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            HCREL+LPNIAKFL +   KS    K      SRPD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 419  HCRELILPNIAKFLDILDRKSQNLPK----FSSRPDVLRFVAPMPSHMKISWNLMSSYLV 474


>ref|XP_007023655.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508779021|gb|EOY26277.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 471

 Score =  714 bits (1842), Expect = 0.0
 Identities = 353/476 (74%), Positives = 397/476 (83%)
 Frame = -3

Query: 1484 MRKTFLNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPP 1305
            M+K+ L  Q L   RHYSR  + PP PAYA  ++RVSN+VA+LG PK+GPKP+QLLSLPP
Sbjct: 1    MQKSRLGWQFLSLVRHYSR--VAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPP 58

Query: 1304 FPGHPLPGRKSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKG 1125
            FPG+PLPG+       VTAISWLKYYFD+IP   IQSHFNKGLVQME  ++ ++     G
Sbjct: 59   FPGYPLPGKNPGGTARVTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDG 118

Query: 1124 QPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYK 945
                + KIKH EV+EVG RV+VPVS+ E+RISKRFD IPSGTL PN DEI+YLQRLVKYK
Sbjct: 119  LMKPLRKIKHNEVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYK 178

Query: 944  DSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 765
            D AILVLNKPPKLPVKG++PVHNSMD      LSYD+DEGPKLVHRLDRESSGLLLMGRT
Sbjct: 179  DYAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLLMGRT 238

Query: 764  EESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLD 585
            +ES+++LHWLF+D+   KS  KAWNDAC+  YQR+WALVIG PKEKEGLICAPL+K+LLD
Sbjct: 239  KESVAHLHWLFNDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSKILLD 298

Query: 584  NGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGT 405
            +GKTERV+LA N  LEASQEAITEYRVLGPMINGCSWIELRP TSRKHQLRVHCAEALGT
Sbjct: 299  DGKTERVILAQNVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGT 358

Query: 404  PIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRE 225
            PIVGDY+YGWF+H RWKQMPRVD EPTTG+PYK+RRPEGLDVQKGSVLSKVPLLHLHCRE
Sbjct: 359  PIVGDYKYGWFVHRRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRE 418

Query: 224  LVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            LVLPNIAKFL +  NK+     P L    +PDLLRFVA MP HMKISWNLMSSYLV
Sbjct: 419  LVLPNIAKFLPV-LNKNTETLPPAL--SMKPDLLRFVATMPKHMKISWNLMSSYLV 471


>gb|EYU23584.1| hypothetical protein MIMGU_mgv1a026780mg, partial [Erythranthe
            guttata]
          Length = 452

 Score =  713 bits (1840), Expect = 0.0
 Identities = 349/457 (76%), Positives = 392/457 (85%)
 Frame = -3

Query: 1427 TRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPPFPGHPLPGRKSASAYHVTA 1248
            ++IRPP PA  KA++RVSNN+AHLG PKEGPKP+QLLSLPPFPG+PLPGR S S  HVTA
Sbjct: 1    SKIRPPPPASTKAVLRVSNNIAHLGAPKEGPKPKQLLSLPPFPGNPLPGRHSTSVEHVTA 60

Query: 1247 ISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKGQPLSMIKIKHYEVIEVGAR 1068
            ISWLKYYFDD+ PPVIQ HFNKGLV+MEC++S+  S S+ GQ +S  KIK  E++E G R
Sbjct: 61   ISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYTGQTMSTRKIKPSEIMEEGDR 120

Query: 1067 VYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYKDSAILVLNKPPKLPVKGNM 888
            VYVPVSV E+++SKRFDVIPSGTL PNADEI YLQRL    DSAILVLNKPPKLPVKGN+
Sbjct: 121  VYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRL----DSAILVLNKPPKLPVKGNL 176

Query: 887  PVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRTEESISYLHWLFSDVKKGKS 708
             VHNSMD      LSYDYDEGPKLVHRLDRESSGLLLMGRT+ESISYLHWLFSDV+K  S
Sbjct: 177  LVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKESISYLHWLFSDVRKAAS 236

Query: 707  MSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLDNGKTERVMLANNSVLEASQ 528
             SK W+DAC+  YQRYWALVIG P +KEG+I APLTKVLL++GKTE V+L++NS LEASQ
Sbjct: 237  FSKEWSDACDAMYQRYWALVIGVPNQKEGVIFAPLTKVLLNDGKTEMVILSHNSGLEASQ 296

Query: 527  EAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGTPIVGDYRYGWFIHNRWKQM 348
            EAIT YRVLGPMINGCSWIEL P T RKHQLRVHCAEALGTPIVGDY+YGWF+H++WKQM
Sbjct: 297  EAITRYRVLGPMINGCSWIELHPLTRRKHQLRVHCAEALGTPIVGDYKYGWFVHSKWKQM 356

Query: 347  PRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLLLHRNKSAV 168
            PR++FEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLH RE+VLPNI KF+ LH+ K   
Sbjct: 357  PRLNFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHSREMVLPNIEKFIELHKQKPG- 415

Query: 167  NYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            NY  D    ++PD+LRFVA MP HMKISWNLMSSYLV
Sbjct: 416  NYNVDPELCAKPDILRFVAPMPKHMKISWNLMSSYLV 452


>emb|CDO98596.1| unnamed protein product [Coffea canephora]
          Length = 465

 Score =  711 bits (1836), Expect = 0.0
 Identities = 353/463 (76%), Positives = 397/463 (85%), Gaps = 1/463 (0%)
 Frame = -3

Query: 1442 RHYSRTR-IRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPPFPGHPLPGRKSAS 1266
            RHYSR++ ++PP       +IRV+NNVAHLG P++GPKP+QLLSLPPFPG PLPGR S++
Sbjct: 15   RHYSRSKKVQPPR------VIRVTNNVAHLGRPRKGPKPRQLLSLPPFPGLPLPGRNSST 68

Query: 1265 AYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKGQPLSMIKIKHYEV 1086
              HVTAISWLKYYFDDIP  V+QSHFNKGLVQME +DS+ SS+S   Q  S  KI H E 
Sbjct: 69   G-HVTAISWLKYYFDDIPGDVVQSHFNKGLVQMESLDSSMSSKSQGMQTKSTRKINHNEA 127

Query: 1085 IEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYKDSAILVLNKPPKL 906
            +E GARV VPVSV E++ISKRFD+IPSGTL PNADEIEYLQRL    DSAILVLNKPPKL
Sbjct: 128  MEPGARVSVPVSVAEAKISKRFDIIPSGTLYPNADEIEYLQRL----DSAILVLNKPPKL 183

Query: 905  PVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRTEESISYLHWLFSD 726
            PVKGN+P+HNSMD      LSYDYDEGPKLVHRLDRESSGLLLMGRT+ESISYLH LFSD
Sbjct: 184  PVKGNLPIHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKESISYLHLLFSD 243

Query: 725  VKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLDNGKTERVMLANNS 546
            + K KS+SK W DACE TYQRYWALVIG PKEKEGLI AP+TKV+LD+GKTERV++AN S
Sbjct: 244  INKAKSLSKGWGDACESTYQRYWALVIGSPKEKEGLIHAPITKVMLDDGKTERVIVANRS 303

Query: 545  VLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGTPIVGDYRYGWFIH 366
             LEA QEAITEYRVLGPMINGCSWIELRP TSRKHQLRVHC+EALGTPIVGDY+YGWF+H
Sbjct: 304  GLEAFQEAITEYRVLGPMINGCSWIELRPHTSRKHQLRVHCSEALGTPIVGDYKYGWFVH 363

Query: 365  NRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLLLH 186
            ++WKQMPRVDFEP +GEPY++RRPEGLDVQKGSVLSKVPLLHLHCRE+VLPNI KFL +H
Sbjct: 364  HKWKQMPRVDFEPNSGEPYRLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIEKFLEIH 423

Query: 185  RNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
             +K + NY   L   S+PD+LRFVA MPSHMKISWNLMSSYL+
Sbjct: 424  TSKGS-NYSSKLKYSSKPDVLRFVAPMPSHMKISWNLMSSYLI 465


>ref|XP_002267010.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Vitis
            vinifera]
          Length = 479

 Score =  707 bits (1824), Expect = 0.0
 Identities = 353/467 (75%), Positives = 393/467 (84%), Gaps = 5/467 (1%)
 Frame = -3

Query: 1442 RHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPPFPGHPLPGRK---- 1275
            RHYSR  I PP PA A  +IRVSNNVA LG PKEGPKP+QLLSLPPFP HPLPG+     
Sbjct: 17   RHYSR--IAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLPGKSLVNV 74

Query: 1274 SASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKGQPLSMIKIKH 1095
            S    HVTAISW+KYYFD+IP  V+QSHFNKGLV ME  +  +SS   +GQ   + KIK 
Sbjct: 75   SGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRKIKP 134

Query: 1094 YEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYKDSAILVLNKP 915
             EV+E G R+YVPVSV E+RISKRFD IPSGTL PNADEIEYLQRLV YKD AILVLNKP
Sbjct: 135  NEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPAILVLNKP 194

Query: 914  PKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRTEESISYLHWL 735
            PK+P+KGN+PVHNSMD      L++DY+EGPKLVHRLDRESSGLLLMGRT+ES+++LHWL
Sbjct: 195  PKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAHLHWL 254

Query: 734  FSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLDNGKTERVMLA 555
            FSD+ K KS+SKAW+DACE T QRYWALVIG PK+KEG+I APL+KVLLD+GKTERV+LA
Sbjct: 255  FSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILA 314

Query: 554  NNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGTPIVGDYRYGW 375
            N S LEASQEAITEYRVLGPMINGCSWIEL PRTSRKHQLRVHCAEALGTPIVGDY+YGW
Sbjct: 315  NQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGW 374

Query: 374  FIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL 195
            F+H RWKQMPRVD EPTTG+PYKMRRPEGLDVQKGSVLSKVPLLHLHCREL+LPNIAKFL
Sbjct: 375  FVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFL 434

Query: 194  -LLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
             +L       N  P L    +PD+LRFVA+MP+HMKISWNLMSSYLV
Sbjct: 435  PILDPKPKNQNQYPKL--SLKPDILRFVASMPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  700 bits (1806), Expect = 0.0
 Identities = 351/469 (74%), Positives = 394/469 (84%), Gaps = 7/469 (1%)
 Frame = -3

Query: 1442 RHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPPFPGHPLPGRK---- 1275
            RHYSR  I PP PA A  +IRVSNNVA LG PKEGPKP+QLLSLPPFP HPLPG+     
Sbjct: 17   RHYSR--IAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLPGKSLVNV 74

Query: 1274 SASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKGQPLSMIKIKH 1095
            S    HVTAISW+KYYFD+IP  V+QSHFNKGLV ME  +  +SS   +GQ   + KIK 
Sbjct: 75   SGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRKIKP 134

Query: 1094 YEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRL--VKYKDSAILVLN 921
             EV+E G R+YVPVSV E+RISKRFD IPSGTL PNADEIEYLQRL  +K++D AILVLN
Sbjct: 135  NEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQDPAILVLN 194

Query: 920  KPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRTEESISYLH 741
            KPPK+P+KGN+PVHNSMD      L++DY+EGPKLVHRLDRESSGLLLMGRT+ES+++LH
Sbjct: 195  KPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAHLH 254

Query: 740  WLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLDNGKTERVM 561
            WLFSD+ K KS+SKAW+DACE T QRYWALVIG PK+KEG+I APL+KVLLD+GKTERV+
Sbjct: 255  WLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVI 314

Query: 560  LANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGTPIVGDYRY 381
            LAN S LEASQEAITEYRVLGPMINGCSWIEL PRTSRKHQLRVHCAEALGTPIVGDY+Y
Sbjct: 315  LANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKY 374

Query: 380  GWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAK 201
            GWF+H RWKQMPRVD EPTTG+PYKMRRPEGLDVQKGSVLSKVPLLHLHCREL+LPNIAK
Sbjct: 375  GWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAK 434

Query: 200  FL-LLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            FL +L       N  P L    +PD+LRFVA+MP+HMKISWNLMSSYLV
Sbjct: 435  FLPILDPKPKNQNQYPKL--SLKPDILRFVASMPNHMKISWNLMSSYLV 481


>ref|XP_012444478.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Gossypium
            raimondii] gi|823223472|ref|XP_012444479.1| PREDICTED:
            RNA pseudouridine synthase 3, mitochondrial [Gossypium
            raimondii] gi|763789432|gb|KJB56428.1| hypothetical
            protein B456_009G119600 [Gossypium raimondii]
          Length = 472

 Score =  697 bits (1799), Expect = 0.0
 Identities = 349/478 (73%), Positives = 396/478 (82%), Gaps = 2/478 (0%)
 Frame = -3

Query: 1484 MRKTFLNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPP 1305
            M+K  L   +L   RHYSR  + PP PAYA  +IRVSNNVA+LG PK+GPKP+QLLSLPP
Sbjct: 1    MQKNRLGHHLLSLARHYSR--VAPPPPAYADPVIRVSNNVAYLGSPKQGPKPRQLLSLPP 58

Query: 1304 FPGHPLPGRKSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVD--STNSSRSH 1131
            FPGH LPG+ SA+   VTAISWLKYYFD+I    IQSHFNKGLV++E  +  + +S    
Sbjct: 59   FPGHHLPGKNSATG-RVTAISWLKYYFDEISDSAIQSHFNKGLVEIESSNPNAADSFIER 117

Query: 1130 KGQPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVK 951
             GQ  S+ KIKH EV+EVGARV+VPVS+ E+R+SKRFD IPSGTL PNADEI+YL+RLVK
Sbjct: 118  DGQMKSLRKIKHNEVMEVGARVWVPVSIAETRVSKRFDCIPSGTLHPNADEIDYLRRLVK 177

Query: 950  YKDSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMG 771
            YKD AILVLNKPPKLPVKG++PVHNSMD      LSY YDEGPKLVHRLDRESSGLLLMG
Sbjct: 178  YKDYAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYYYDEGPKLVHRLDRESSGLLLMG 237

Query: 770  RTEESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVL 591
            RT+ESI++LHWLF+D+   KS  KAWNDAC+  +QRYWALVIG PKE EGLI +PL+K+L
Sbjct: 238  RTKESINHLHWLFNDINPAKSSCKAWNDACDAKFQRYWALVIGTPKENEGLIRSPLSKIL 297

Query: 590  LDNGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEAL 411
            LD+GKTERV+LA N  LE SQEA+TEYRVLGPMINGCSW+ELRP TSRKHQLRVHCAEAL
Sbjct: 298  LDDGKTERVILAQNVGLEPSQEAVTEYRVLGPMINGCSWVELRPLTSRKHQLRVHCAEAL 357

Query: 410  GTPIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHC 231
            GTPIVGDY+YGWF+H +WKQMPRVD E  TG+PYK+RRPEGLDVQKGSVLSKVPLLHLHC
Sbjct: 358  GTPIVGDYKYGWFVHRKWKQMPRVDIEQRTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHC 417

Query: 230  RELVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            RELVLPNIAKFL L  N +A    P L    +PDLLRFVA+MP HMKISWNLMSSYLV
Sbjct: 418  RELVLPNIAKFLPLLSN-NAETLSPGL--SGKPDLLRFVASMPKHMKISWNLMSSYLV 472


>ref|XP_009620200.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nicotiana
            tomentosiformis] gi|697097192|ref|XP_009620208.1|
            PREDICTED: RNA pseudouridine synthase 3, mitochondrial
            [Nicotiana tomentosiformis]
            gi|697097194|ref|XP_009620216.1| PREDICTED: RNA
            pseudouridine synthase 3, mitochondrial [Nicotiana
            tomentosiformis] gi|697097196|ref|XP_009620223.1|
            PREDICTED: RNA pseudouridine synthase 3, mitochondrial
            [Nicotiana tomentosiformis]
          Length = 478

 Score =  696 bits (1797), Expect = 0.0
 Identities = 347/476 (72%), Positives = 396/476 (83%), Gaps = 5/476 (1%)
 Frame = -3

Query: 1469 LNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPPFPGHP 1290
            ++R +L   R YSR+          + +IRVSN++ HLG PKEG KP QLLSLPPFPGHP
Sbjct: 7    VSRCLLFLVRRYSRSVGHSALANRGQPVIRVSNSITHLGRPKEGAKPSQLLSLPPFPGHP 66

Query: 1289 LPGRKSASA-----YHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKG 1125
            L G+K+A++      HVTAISW+KYYFD+IP  VIQSHFNKGLVQ+E      SS S +G
Sbjct: 67   LLGKKAATSPDQPSRHVTAISWIKYYFDEIPGSVIQSHFNKGLVQLEF---NESSTSKEG 123

Query: 1124 QPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYK 945
            Q   + KIKH EV+EVGARVYVP+SV E++ISKR+DVIPSGTL PNADEI YLQRLV YK
Sbjct: 124  QTRLLRKIKHSEVMEVGARVYVPISVAETKISKRYDVIPSGTLYPNADEIAYLQRLVFYK 183

Query: 944  DSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 765
            D A++VLNKPPKLPVKGN+PVHNSMD      LSY+YDEGP+LVHRLDRESSGL LMGRT
Sbjct: 184  DPALIVLNKPPKLPVKGNLPVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLMGRT 243

Query: 764  EESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLD 585
            EESIS+LH LFS+ K+ KS+SKAWNDAC  TYQRYWALVIG PKEKEG+I APLTKVLLD
Sbjct: 244  EESISHLHLLFSNAKRSKSLSKAWNDACGSTYQRYWALVIGSPKEKEGIISAPLTKVLLD 303

Query: 584  NGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGT 405
            +G+TERVMLA +S LEAS+EAITEYR+LGPMINGCSWIELRP TSRKHQLRVHCAEALGT
Sbjct: 304  DGRTERVMLAQHSGLEASEEAITEYRLLGPMINGCSWIELRPHTSRKHQLRVHCAEALGT 363

Query: 404  PIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRE 225
            PIVGDY+YGWF+H +WKQMPRVD EPTTG+PY+++RPEGLDVQKGSVLSKVPLLHLHCRE
Sbjct: 364  PIVGDYKYGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRE 423

Query: 224  LVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            LVLPNIAKF+ LH  K+      +  N S+PDLLRFVA MPSHMKISW LMSSYL+
Sbjct: 424  LVLPNIAKFIELHSRKTRTRCL-NADNSSKPDLLRFVAPMPSHMKISWKLMSSYLI 478


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 468

 Score =  695 bits (1793), Expect = 0.0
 Identities = 350/476 (73%), Positives = 395/476 (82%)
 Frame = -3

Query: 1484 MRKTFLNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPP 1305
            M K    R+++   R YSR  I PP PAYA  +IRVSNNVAHLG PK+GPKP+QLLSLPP
Sbjct: 1    MWKNIYCRRVVSQGRSYSR--IAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPP 58

Query: 1304 FPGHPLPGRKSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKG 1125
            FPG PLPGR S ++ HVTAISW+KYYFD+I    IQSHFNKGL  +EC + + S     G
Sbjct: 59   FPGLPLPGRNSMAS-HVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSIEY--G 115

Query: 1124 QPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYK 945
              +S+ KIKH +++E GARV+V VSV E+RISKRFD IPSGTL PNADEI+YLQRLVKYK
Sbjct: 116  GQMSLRKIKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYK 175

Query: 944  DSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 765
            DSAI+VLNKPP+LPVKGN+P+HNSMD      LSYDYDEGPKLV RLDRESSGLLLMGRT
Sbjct: 176  DSAIIVLNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRT 235

Query: 764  EESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLD 585
            +ESI +L WLFSDV K  S  KAWNDAC+ TYQRYWALVIG PKEKEGLI APL+KVLL+
Sbjct: 236  KESIDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLN 295

Query: 584  NGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGT 405
            +GKTERV+LA +S LEASQEA+TEYRVLGP INGCSWIELRP TSRKHQLRVHCAEALGT
Sbjct: 296  DGKTERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGT 355

Query: 404  PIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRE 225
            PIVGDY+YGW +H RWKQMPRVD EP +G+PYK+RRP GLDVQKGSVLSKVPLLHLHCRE
Sbjct: 356  PIVGDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCRE 415

Query: 224  LVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
             VLPNIAKFL +   KS  N  P L  +++PDLLRFVA+MP+HMKISWNLMSSYLV
Sbjct: 416  FVLPNIAKFLAVLNEKSE-NIHPAL--DAKPDLLRFVASMPTHMKISWNLMSSYLV 468


>ref|XP_009804022.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nicotiana
            sylvestris] gi|698518295|ref|XP_009804023.1| PREDICTED:
            RNA pseudouridine synthase 3, mitochondrial [Nicotiana
            sylvestris] gi|698518297|ref|XP_009804024.1| PREDICTED:
            RNA pseudouridine synthase 3, mitochondrial [Nicotiana
            sylvestris]
          Length = 478

 Score =  694 bits (1790), Expect = 0.0
 Identities = 346/476 (72%), Positives = 394/476 (82%), Gaps = 5/476 (1%)
 Frame = -3

Query: 1469 LNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPPFPGHP 1290
            ++R +    R YSR+          + +IRVSN++ HLG PK+G KP QLLSLPPFPGHP
Sbjct: 7    VSRCLFFLVRRYSRSVGHSAIANRRQPVIRVSNSITHLGRPKDGAKPSQLLSLPPFPGHP 66

Query: 1289 LPGRKSASA-----YHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKG 1125
            LPG+K+A++      HVTAISW+KYYFD+I   VIQSHFNKGLVQ+E      SS S +G
Sbjct: 67   LPGKKAATSPDQPSRHVTAISWIKYYFDEILGSVIQSHFNKGLVQLEF---NESSTSKEG 123

Query: 1124 QPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYK 945
            Q   + KIKH EV+EVGARVYVP+SV E++ISKR+DVIPSGTL PNADEI YLQRLV YK
Sbjct: 124  QTRLLRKIKHSEVMEVGARVYVPISVAETKISKRYDVIPSGTLYPNADEIAYLQRLVFYK 183

Query: 944  DSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 765
            D AI+VLNKPPKLPVKGN+PVHNSMD      LSY+YDEGP+LVHRLDRESSGL LMGRT
Sbjct: 184  DPAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLMGRT 243

Query: 764  EESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLD 585
            EESIS+LH LFS  K+ KS+SKAWNDAC  TYQRYWALVIG PKEKEG+I APLTKVLLD
Sbjct: 244  EESISHLHLLFSSTKRSKSLSKAWNDACGSTYQRYWALVIGSPKEKEGIISAPLTKVLLD 303

Query: 584  NGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGT 405
            +G+TERVMLA +S LEAS+EAITEYR+LGPMINGCSWIELRP TSRKHQLRVHCAEALGT
Sbjct: 304  DGRTERVMLAQHSGLEASEEAITEYRLLGPMINGCSWIELRPHTSRKHQLRVHCAEALGT 363

Query: 404  PIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRE 225
            PIVGDY+YGWF+H +WKQMPRVD EPTTG+PY+++RPEGLDVQKGSVLSKVPLLHLHCRE
Sbjct: 364  PIVGDYKYGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRE 423

Query: 224  LVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            LVLPNIAKF+ LH  K+      +  N S+PDLLRFVA MPSHMKISW LMSSYL+
Sbjct: 424  LVLPNIAKFIELHSRKTRTRCL-NADNSSKPDLLRFVAPMPSHMKISWKLMSSYLI 478


>ref|XP_012092035.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Jatropha
            curcas] gi|643704235|gb|KDP21299.1| hypothetical protein
            JCGZ_21770 [Jatropha curcas]
          Length = 462

 Score =  685 bits (1767), Expect = 0.0
 Identities = 345/476 (72%), Positives = 394/476 (82%)
 Frame = -3

Query: 1484 MRKTFLNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPP 1305
            M K    +++L   R YSR  I  P PAYA+ +IRVSNNVA+LG PK+GPKP+QLLSLPP
Sbjct: 1    MWKNIHCKRVLSKVRSYSR--IAAPPPAYAQPVIRVSNNVAYLGSPKDGPKPRQLLSLPP 58

Query: 1304 FPGHPLPGRKSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKG 1125
            FPG PLPG+ S ++  VTAISW+KYYFD+IP  VIQSHFN+GLVQMEC+        H G
Sbjct: 59   FPGLPLPGKTSVAS-RVTAISWVKYYFDEIPDSVIQSHFNRGLVQMECMQ-------HGG 110

Query: 1124 QPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYK 945
            +   M KIK  +V+EVGARV +PVSV E+RISKRFD IPSGTL PNADEIEYLQRLVKYK
Sbjct: 111  ETF-MRKIKPSDVMEVGARVLIPVSVAETRISKRFDTIPSGTLYPNADEIEYLQRLVKYK 169

Query: 944  DSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 765
            DSAI+VLNKPPKLP+KGN+PVHNSMD      L+YDYDEGPKLV RLDRESSGL+LMGRT
Sbjct: 170  DSAIIVLNKPPKLPIKGNLPVHNSMDALAAAALTYDYDEGPKLVQRLDRESSGLILMGRT 229

Query: 764  EESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLD 585
            +ES+ +L W+FSD KK  S  K WNDAC+ T QRYWAL+IG PKEKEGLI APL+KVLL+
Sbjct: 230  KESVDHLQWMFSDQKKSNSYCKDWNDACQATCQRYWALIIGSPKEKEGLIRAPLSKVLLN 289

Query: 584  NGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGT 405
            +GKTER++LA NS  EASQEA+TEYRVLGP INGCSW+EL P TSRKHQLRVHCAEALGT
Sbjct: 290  DGKTERIVLAQNSGFEASQEALTEYRVLGPTINGCSWVELCPLTSRKHQLRVHCAEALGT 349

Query: 404  PIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRE 225
            PIVGDY+YGWF+H RWKQMPRVD EP +G+PYK+RRPEG+DVQKGSVLSKVPLLHLHCRE
Sbjct: 350  PIVGDYKYGWFMHRRWKQMPRVDIEPFSGKPYKLRRPEGIDVQKGSVLSKVPLLHLHCRE 409

Query: 224  LVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            LVLPNIAKFL +   KS  N  P L   ++PDLLRFVA+MP+HMKISWNLMSSYLV
Sbjct: 410  LVLPNIAKFLDVLNQKSK-NIHPAL--SAKPDLLRFVASMPTHMKISWNLMSSYLV 462


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
            gi|557538602|gb|ESR49646.1| hypothetical protein
            CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  684 bits (1766), Expect = 0.0
 Identities = 346/468 (73%), Positives = 392/468 (83%), Gaps = 2/468 (0%)
 Frame = -3

Query: 1454 LLACRHYSRTRIRPPSPAYAKAIIRVSNN-VAHLGCPKEGPKPQQLLSLPPFPGHPLPGR 1278
            L + RHYSR  I PP PA    +IRVS   VAHLG PK GPKP+QLLSLPPFPGH LPG+
Sbjct: 12   LSSIRHYSR--ISPPRPA----VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPGHNLPGK 65

Query: 1277 KSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKGQPLSMIKIK 1098
                  HVTA+SW+KYYFD++   VIQSHFNKGLVQMEC +  +S    +GQ   + KIK
Sbjct: 66   HWGRQCHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGDSF-VEQGQMKPIRKIK 124

Query: 1097 HYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYKDSAILVLNK 918
              EV+E GAR+++PVS+VE RISKR+D IPSGTL PNADEI+YL+RLVKY+DSAILVLNK
Sbjct: 125  TNEVMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILVLNK 184

Query: 917  PPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRTEESISYLHW 738
            PPK+P+KG++PVHNSMD      LSYDY+EGPKLVHRLDRESSGLLLMGRT+ES+S L W
Sbjct: 185  PPKVPLKGHLPVHNSMDALAAAALSYDYNEGPKLVHRLDRESSGLLLMGRTKESVSLLTW 244

Query: 737  LFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLDNGKTERVML 558
            LFSDV K KS+SKAWNDACE  YQRYWALVIG PKEK+G+I APL+KVLLD+GKTER++L
Sbjct: 245  LFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIIL 304

Query: 557  ANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGTPIVGDYRYG 378
            A NS LEASQEA+TEYRVLGPMINGCSWIELRP T RKHQLRVHCAEALGTPIVGDY+YG
Sbjct: 305  AQNSGLEASQEAVTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYG 364

Query: 377  WFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKF 198
            WF+H RWKQMPRVD EPT+G+PYK+RRP+GLDVQKGSVLSKVPLLHLHCRELVLPNIAKF
Sbjct: 365  WFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKF 424

Query: 197  LLLHRNKSAVNYKPDLMNE-SRPDLLRFVAAMPSHMKISWNLMSSYLV 57
              +   KS  N  P L ++   PDLLRFVA+MPSHMKISWNLMSSYLV
Sbjct: 425  RNVLNQKSD-NLFPTLSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 471


>gb|KHG09609.1| hypothetical protein F383_12972 [Gossypium arboreum]
          Length = 468

 Score =  684 bits (1764), Expect = 0.0
 Identities = 345/481 (71%), Positives = 396/481 (82%), Gaps = 5/481 (1%)
 Frame = -3

Query: 1484 MRKTFLNRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPP 1305
            M+K  L   +L   R+YSR  + PP PAYA  +IRVSNNVA+LG PK+GPKP+QLLSLPP
Sbjct: 1    MQKNKLGHHLLSLARYYSR--VAPPPPAYADPVIRVSNNVAYLGSPKQGPKPRQLLSLPP 58

Query: 1304 FPGHPLPGRKSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHK- 1128
            FPGH LPG+ SA+   VTAISWLKYYFD+I    IQSHFNKGLV++E   S+N + ++  
Sbjct: 59   FPGHHLPGKNSATG-RVTAISWLKYYFDEISDSAIQSHFNKGLVKIE---SSNPNAAYSF 114

Query: 1127 ----GQPLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQR 960
                GQ  S+ KIKH EV+EVGARV+VPVS+ E+R+S+RFD IPSGTL PNADEI+YL+R
Sbjct: 115  IERDGQMKSLRKIKHNEVMEVGARVWVPVSIAETRVSRRFDCIPSGTLHPNADEIDYLRR 174

Query: 959  LVKYKDSAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLL 780
            L    D AILVLNKPPKLPVKG++PVHNSMD      LSYDYDEGPKLVHRLDRESSGLL
Sbjct: 175  L----DYAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLL 230

Query: 779  LMGRTEESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLT 600
            L+GRT+ESIS+LHWLF+D+   KS  KAWNDAC+  +QR+WALVIG PKE EGLI +PL+
Sbjct: 231  LLGRTKESISHLHWLFNDINPAKSSCKAWNDACDAKFQRFWALVIGTPKENEGLIRSPLS 290

Query: 599  KVLLDNGKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCA 420
            K+LLD+GKTERV+LA N  LE SQEA+TEYRVLGPMINGCSW+ELRP TSRKHQLRVHCA
Sbjct: 291  KILLDDGKTERVILAQNVGLEPSQEAVTEYRVLGPMINGCSWVELRPLTSRKHQLRVHCA 350

Query: 419  EALGTPIVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLH 240
            EALGTPIVGDY+YGWF+H +WKQMPRVD EP TG+PYK+RRPEGLDVQKGSVLSKVPLLH
Sbjct: 351  EALGTPIVGDYKYGWFVHRKWKQMPRVDIEPRTGKPYKLRRPEGLDVQKGSVLSKVPLLH 410

Query: 239  LHCRELVLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYL 60
            LHCRELVLPNIAKFL L  N +A    P L    +PDLLRFVA+MP HMKISWNLMSSYL
Sbjct: 411  LHCRELVLPNIAKFLPLLSN-NAETLSPGL--SGKPDLLRFVASMPKHMKISWNLMSSYL 467

Query: 59   V 57
            V
Sbjct: 468  V 468


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
            sinensis]
          Length = 471

 Score =  682 bits (1760), Expect = 0.0
 Identities = 345/468 (73%), Positives = 392/468 (83%), Gaps = 2/468 (0%)
 Frame = -3

Query: 1454 LLACRHYSRTRIRPPSPAYAKAIIRVSNN-VAHLGCPKEGPKPQQLLSLPPFPGHPLPGR 1278
            L + RHYSR  I PP PA    +IRVS   VAHLG PK GPKP+QLLSLPPFPGH LPG+
Sbjct: 12   LSSIRHYSR--ISPPRPA----VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPGHNLPGK 65

Query: 1277 KSASAYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKGQPLSMIKIK 1098
                  HVTA+SW+KYYFD++   VIQSHFNKGLVQMEC +  +S    +GQ   + KIK
Sbjct: 66   HWGRQGHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGDSF-VEQGQMKPIRKIK 124

Query: 1097 HYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYKDSAILVLNK 918
              EV+E GAR+++PVS+VE RISKR+D IPSGTL PNADEI+YL+RLVKY+DSAILVLNK
Sbjct: 125  TNEVMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILVLNK 184

Query: 917  PPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRTEESISYLHW 738
            PPK+P+KGN+PVHNSMD      LSYD +EGPKLVHRLDRESSGLLLMGRT+ES+S L W
Sbjct: 185  PPKVPLKGNLPVHNSMDALAAAALSYDNNEGPKLVHRLDRESSGLLLMGRTKESVSLLTW 244

Query: 737  LFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLDNGKTERVML 558
            LFSDV K KS+SKAWNDACE  YQRYWALVIG P+EK+G+I APL+KVLLD+GKTER++L
Sbjct: 245  LFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPREKQGIIRAPLSKVLLDDGKTERIIL 304

Query: 557  ANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGTPIVGDYRYG 378
            A NS LEASQEA+TEYRVLGPMINGCSWIELRP T RKHQLRVHCAEALGTPIVGDY+YG
Sbjct: 305  AQNSGLEASQEAMTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYG 364

Query: 377  WFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKF 198
            WF+H RWKQMPRVD EPT+G+PYK+RRP+GLDVQKGSVLSKVPLLHLHCRELVLPNIAKF
Sbjct: 365  WFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKF 424

Query: 197  LLLHRNKSAVNYKPDLMNE-SRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            + +   KS  N  P L ++   PDLLRFVA+MPSHMKISWNLMSSYLV
Sbjct: 425  INVLNQKSD-NLFPTLSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
            X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
            PREDICTED: RNA pseudouridine synthase 3,
            mitochondrial-like isoform X2 [Solanum tuberosum]
            gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
            pseudouridine synthase 3, mitochondrial-like isoform X3
            [Solanum tuberosum]
          Length = 475

 Score =  681 bits (1758), Expect = 0.0
 Identities = 341/475 (71%), Positives = 389/475 (81%), Gaps = 5/475 (1%)
 Frame = -3

Query: 1466 NRQILLACRHYSRTRIRPPSPAYAKAIIRVSNNVAHLGCPKEGPKPQQLLSLPPFPGHPL 1287
            +R +L   R +SR+        + + +IRVSNN+ HLG  KEG KP QLLSLPPFPGHPL
Sbjct: 8    SRCLLFLVRRFSRSVGHSAQANHCEPVIRVSNNITHLGRQKEGAKPSQLLSLPPFPGHPL 67

Query: 1286 PGRKSAS-----AYHVTAISWLKYYFDDIPPPVIQSHFNKGLVQMECVDSTNSSRSHKGQ 1122
            PG+K A+     + HVTAISW+KYYFD+IP  VIQ+HFNKGLVQ+E  +   S    +GQ
Sbjct: 68   PGKKVATGPDQPSCHVTAISWIKYYFDEIPGSVIQTHFNKGLVQLEFNELFTSK---EGQ 124

Query: 1121 PLSMIKIKHYEVIEVGARVYVPVSVVESRISKRFDVIPSGTLCPNADEIEYLQRLVKYKD 942
               + KIKH EV+EVGAR++VP+SV E+RISKR+DVIPSGTL PNADEI YLQRLV YKD
Sbjct: 125  TRLLRKIKHSEVMEVGARIHVPISVAETRISKRYDVIPSGTLYPNADEIAYLQRLVFYKD 184

Query: 941  SAILVLNKPPKLPVKGNMPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRTE 762
             AILVLNKPPKLP+KGN+PVHNSMD      LSY+YDEGP+LVHRLDRESSGL LMGRTE
Sbjct: 185  PAILVLNKPPKLPLKGNLPVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLMGRTE 244

Query: 761  ESISYLHWLFSDVKKGKSMSKAWNDACEETYQRYWALVIGCPKEKEGLICAPLTKVLLDN 582
            ESIS+LH LFS+ KK KS+SKAWNDAC  TYQRYWALVIG PKEKEG+I APLTKVLLD+
Sbjct: 245  ESISHLHLLFSNTKKSKSLSKAWNDACGSTYQRYWALVIGSPKEKEGVISAPLTKVLLDD 304

Query: 581  GKTERVMLANNSVLEASQEAITEYRVLGPMINGCSWIELRPRTSRKHQLRVHCAEALGTP 402
            G+TERVMLA  S LEAS EA+TEYR+LGPMINGCSWIELRP TSRKHQ+RVHCAEALGTP
Sbjct: 305  GRTERVMLAQQSGLEASDEAVTEYRLLGPMINGCSWIELRPHTSRKHQIRVHCAEALGTP 364

Query: 401  IVGDYRYGWFIHNRWKQMPRVDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL 222
            IVGDY+YGWF+H +WKQMPRVD EPTTG+PY+++RPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 365  IVGDYKYGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCREL 424

Query: 221  VLPNIAKFLLLHRNKSAVNYKPDLMNESRPDLLRFVAAMPSHMKISWNLMSSYLV 57
            VLPNIAKF+ LH  K+    K      S+PDLLRFVA MPS MKISW LMSS L+
Sbjct: 425  VLPNIAKFIELHSRKT----KKHSDYSSKPDLLRFVAPMPSPMKISWKLMSSCLI 475