BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00003397
         (1790 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080825.1| PREDICTED: transcription initiation factor I...   416   e-150
ref|XP_012836118.1| PREDICTED: transcription initiation factor I...   392   e-139
ref|XP_004241212.1| PREDICTED: transcription initiation factor I...   387   e-135
ref|XP_009787287.1| PREDICTED: transcription initiation factor I...   383   e-135
ref|XP_006350788.1| PREDICTED: transcription initiation factor I...   382   e-134
ref|XP_009622244.1| PREDICTED: transcription initiation factor I...   388   e-134
ref|XP_012066966.1| PREDICTED: transcription initiation factor I...   367   e-129
ref|XP_002520518.1| protein with unknown function [Ricinus commu...   366   e-125
ref|XP_007016334.1| Transcription initiation factor IIA subunit ...   339   e-120
ref|XP_010685693.1| PREDICTED: transcription initiation factor I...   349   e-120
ref|XP_002282322.1| PREDICTED: transcription initiation factor I...   346   e-119
gb|KDO66627.1| hypothetical protein CISIN_1g015442mg [Citrus sin...   353   e-119
ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citr...   352   e-118
emb|CDP09102.1| unnamed protein product [Coffea canephora]            431   e-118
ref|XP_012475136.1| PREDICTED: transcription initiation factor I...   333   e-117
ref|XP_012446718.1| PREDICTED: transcription initiation factor I...   332   e-117
ref|XP_011032247.1| PREDICTED: transcription initiation factor I...   337   e-115
ref|XP_003543527.1| PREDICTED: transcription initiation factor I...   326   e-115
ref|XP_010033104.1| PREDICTED: transcription initiation factor I...   326   e-114
gb|KHN30144.1| Transcription initiation factor IIA large subunit...   323   e-114

>ref|XP_011080825.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Sesamum indicum]
          Length = 410

 Score =  416 bits (1070), Expect(2) = e-150
 Identities = 214/305 (70%), Positives = 231/305 (75%), Gaps = 13/305 (4%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTA-------DNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGR 1111
            TPLPG AQTPLPGTA       D+SS YNIPTGGTPITPNEY+S  +NG VP++K G GR
Sbjct: 118  TPLPGMAQTPLPGTAPTPLPGSDSSSLYNIPTGGTPITPNEYTSTNENG-VPEVKAGPGR 176

Query: 1110 PSPYMQPPSPWLNQRPPLDVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQ 931
            PSPYMQPPS W+NQRPPLDVN+AYVEGRE+ ERGA HQPTTQDFF + SGKRKR+D PPQ
Sbjct: 177  PSPYMQPPSAWINQRPPLDVNVAYVEGREESERGAPHQPTTQDFF-ISSGKRKRDDLPPQ 235

Query: 930  YHTGGYIPQQDGAGDVLSDD------LEVVQGSNTRYDSVNSIQQMFVLGGKLSSMIPQF 769
            Y  GGYIPQQDGAGD +SD+      L+VVQG N         QQMF   G +SS IPQ 
Sbjct: 236  YRAGGYIPQQDGAGDNISDEDNRSQNLKVVQGGN---------QQMFFQVGTMSSRIPQL 286

Query: 768  DGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXX 589
            DGPIPDPYDDVLSTPNIYNYQGV NEDYNIVNTP PNE+ AATPAP+  NDTG       
Sbjct: 287  DGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPMPNEMHAATPAPVQ-NDTGDDDDDEP 345

Query: 588  XXXXXXXXXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAT 409
                             LNTTHL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAT
Sbjct: 346  LNEDDDDDLDDVDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAT 405

Query: 408  GEFDF 394
            GEFDF
Sbjct: 406  GEFDF 410



 Score =  146 bits (368), Expect(2) = e-150
 Identities = 69/81 (85%), Positives = 75/81 (92%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA+STTSNVY+HVIEDV++KVRDEFINNGGPG+ VLNELQGLWELKMMQAGAILGPIDRS
Sbjct: 1    MASSTTSNVYIHVIEDVINKVRDEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
            A  K+  G PITPNPVHDLNV
Sbjct: 61   ATQKSGAGGPITPNPVHDLNV 81


>ref|XP_012836118.1| PREDICTED: transcription initiation factor IIA large subunit
            [Erythranthe guttatus] gi|604347799|gb|EYU45954.1|
            hypothetical protein MIMGU_mgv1a007767mg [Erythranthe
            guttata]
          Length = 396

 Score =  392 bits (1007), Expect(2) = e-139
 Identities = 206/300 (68%), Positives = 222/300 (74%), Gaps = 8/300 (2%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTA-------DNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGR 1111
            TPLPG AQTPLPGTA       D+ S YNIPTGGTPITPNEY S  DN GV ++K G GR
Sbjct: 112  TPLPGMAQTPLPGTAQTPLTGSDSGSLYNIPTGGTPITPNEYVSPNDNVGVSEVKAGPGR 171

Query: 1110 PSPYMQPPSPWLNQRPPLDVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQ 931
            PSPYMQPPSPW NQRPPLDVN+AYVEGRE+ ERG  HQ TTQDFF + SGKRKR++FPPQ
Sbjct: 172  PSPYMQPPSPWQNQRPPLDVNVAYVEGREESERGGPHQQTTQDFF-VASGKRKRDNFPPQ 230

Query: 930  YHTGGYIPQQDGAGDVLSDDLEVVQGSNTRYDSVNSIQQMFVLGGKLSSMIPQFDGPIPD 751
            Y  GGYIPQQDGAGD LSD+++VV         ++ I Q    GG  SS IPQ DGPIPD
Sbjct: 231  YQAGGYIPQQDGAGDNLSDEMKVV---------LDVIGQ----GGTSSSRIPQSDGPIPD 277

Query: 750  PYDDVLSTPNIYNYQ-GVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXX 574
            PYDDVLSTPNIYNYQ GV NEDYNIVNTP PNE+ AATPAP+  ND              
Sbjct: 278  PYDDVLSTPNIYNYQGGVVNEDYNIVNTPMPNEMLAATPAPVQ-NDVIDDDEDEPLNEDD 336

Query: 573  XXXXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                        LNTTHL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 337  DDDGDELDEGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 396



 Score =  133 bits (334), Expect(2) = e-139
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA+STTSNVY+HVIEDV++KVRDEF   GGPG+ VL+ELQGLWELKMM+AGAILGPIDRS
Sbjct: 1    MASSTTSNVYIHVIEDVINKVRDEFNGGGGPGEGVLSELQGLWELKMMEAGAILGPIDRS 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
            A  K A G PITPNPVHDLNV
Sbjct: 61   ASQKGAGG-PITPNPVHDLNV 80


>ref|XP_004241212.1| PREDICTED: transcription initiation factor IIA large subunit [Solanum
            lycopersicum]
          Length = 401

 Score =  387 bits (993), Expect(2) = e-135
 Identities = 197/295 (66%), Positives = 217/295 (73%), Gaps = 3/295 (1%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGRPSPYMQP 1090
            TPLPGTAQTPLPGTAD SS YNIPTGGTP TP++YS   D GG  ++K G GRPSP+M P
Sbjct: 119  TPLPGTAQTPLPGTAD-SSMYNIPTGGTPFTPSDYSPLNDTGGATELKAGPGRPSPFMHP 177

Query: 1089 PSPWLNQRPPLDVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGGYI 910
            PSPWLNQRPPLDVN+AYVEGRE+G+RG S QP TQDFF   +GKRKREDFPPQYH GGYI
Sbjct: 178  PSPWLNQRPPLDVNVAYVEGREEGDRGGSQQPMTQDFFMNSTGKRKREDFPPQYHNGGYI 237

Query: 909  PQQDGAGDVLSDDLEVVQGSNTRYDSVNSIQQMFVLGGKLSS---MIPQFDGPIPDPYDD 739
            PQQDGA D + D+++  +GSN        IQ   V  G + +    IPQFDGPIPD YDD
Sbjct: 238  PQQDGAADSIYDNIKSGEGSN--------IQLELVTVGPVQAPAYRIPQFDGPIPDSYDD 289

Query: 738  VLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXXXXXXX 559
             LSTPNIY YQGV NEDYNIVNTPAPN++QA TPAPL  +D                   
Sbjct: 290  ALSTPNIY-YQGVVNEDYNIVNTPAPNDMQAPTPAPLQNDD--IDDDDEPLNEDDDDELD 346

Query: 558  XXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                   LNT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 347  DVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF 401



 Score =  126 bits (316), Expect(2) = e-135
 Identities = 61/81 (75%), Positives = 71/81 (87%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA+STTSNVY+HVIEDV+SKVRDEFINNGGPG+S+L ELQ LWE+KMM AGAILG I+R+
Sbjct: 1    MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERN 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
            +  KA PG PIT  PVHDLN+
Sbjct: 61   SAAKATPGGPIT--PVHDLNM 79


>ref|XP_009787287.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Nicotiana sylvestris]
          Length = 403

 Score =  383 bits (983), Expect(2) = e-135
 Identities = 195/293 (66%), Positives = 216/293 (73%), Gaps = 1/293 (0%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGG-TPITPNEYSSALDNGGVPDMKGGAGRPSPYMQ 1093
            TPLPGTAQTPLPGTAD+SS YNIPTGG TP TPNEYSS  D GG   +KGG GRPSP+MQ
Sbjct: 120  TPLPGTAQTPLPGTADSSSMYNIPTGGSTPFTPNEYSSLNDTGGATQLKGGPGRPSPFMQ 179

Query: 1092 PPSPWLNQRPPLDVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGGY 913
            PPSPWLNQRPPLDVN+AYVEGRE+ +RGAS QP TQDFF   +GKRKREDF  QY+ GGY
Sbjct: 180  PPSPWLNQRPPLDVNVAYVEGREEVDRGASQQPMTQDFFMTAAGKRKREDFASQYNNGGY 239

Query: 912  IPQQDGAGDVLSDDLEVVQGSNTRYDSVNSIQQMFVLGGKLSSMIPQFDGPIPDPYDDVL 733
            IPQQDGA D + D ++  +G+  + + V SIQ         +S IPQ DGP  D YD+ L
Sbjct: 240  IPQQDGAADSIYDIMKAGEGNTIQLELVTSIQ-------AAASRIPQVDGP-TDHYDEAL 291

Query: 732  STPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXXXXXXXXX 553
            STPNIY YQGV NEDYNIVNTPAPN++QA TPAP+  ND                     
Sbjct: 292  STPNIYGYQGVVNEDYNIVNTPAPNDMQAPTPAPVLQND-DVDDDDEPLNENDDDDFDDV 350

Query: 552  XXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                 LNT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 351  DQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 403



 Score =  128 bits (322), Expect(2) = e-135
 Identities = 62/81 (76%), Positives = 70/81 (86%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA+STTSNVY+HVIEDV+SKVRDEFINNGGPG+S+LNELQGLWE+KMM AGAILG  +R+
Sbjct: 1    MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILNELQGLWEMKMMHAGAILGTTERN 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
               K  PG PIT  PVHDLNV
Sbjct: 61   PAPKGTPGGPIT-TPVHDLNV 80


>ref|XP_006350788.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Solanum tuberosum]
          Length = 403

 Score =  382 bits (982), Expect(2) = e-134
 Identities = 196/295 (66%), Positives = 217/295 (73%), Gaps = 3/295 (1%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGRPSPYMQP 1090
            TPLPGTAQTPLPGTAD SS YNIPTGGTP TP++YS   D GG  ++K G GRPSP+M P
Sbjct: 119  TPLPGTAQTPLPGTAD-SSMYNIPTGGTPFTPSDYSPLNDTGGATELKAGPGRPSPFMHP 177

Query: 1089 PSPWLNQRPPLDVNIAYVEGRED-GERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGGY 913
            PSPWLNQRPPLDVN+AYVEGRE+ G+RG S QP TQDFF   +GKRKREDFPPQYH GGY
Sbjct: 178  PSPWLNQRPPLDVNVAYVEGREEVGDRGGSQQPMTQDFFMNSAGKRKREDFPPQYHNGGY 237

Query: 912  IPQQDGAGDVLSDDLEVVQGSNTRYD--SVNSIQQMFVLGGKLSSMIPQFDGPIPDPYDD 739
            IPQQDGA D + D+L+  +GSN + +  +V  +Q         +  IPQFDGPIPD YDD
Sbjct: 238  IPQQDGAADSIYDNLKSGEGSNIQLELVTVGPVQAS-------AYRIPQFDGPIPDSYDD 290

Query: 738  VLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXXXXXXX 559
             LSTPNIY YQGV NEDYNIVNTPAPN++QA TPAP   ND                   
Sbjct: 291  ALSTPNIY-YQGVVNEDYNIVNTPAPNDMQAPTPAPALQND-DIDDDDEPLNEDDDDDLD 348

Query: 558  XXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                   LNT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 349  DVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF 403



 Score =  126 bits (316), Expect(2) = e-134
 Identities = 61/81 (75%), Positives = 71/81 (87%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA+STTSNVY+HVIEDV+SKVRDEFINNGGPG+S+L ELQ LWE+KMM AGAILG I+R+
Sbjct: 1    MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERN 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
            +  KA PG PIT  PVHDLN+
Sbjct: 61   SAAKATPGGPIT--PVHDLNM 79


>ref|XP_009622244.1| PREDICTED: transcription initiation factor IIA large subunit
            {ECO:0000250|UniProtKB:P32773,
            ECO:0000312|EMBL:CAB57938.1}-like [Nicotiana
            tomentosiformis]
          Length = 401

 Score =  388 bits (997), Expect(2) = e-134
 Identities = 199/293 (67%), Positives = 218/293 (74%), Gaps = 1/293 (0%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGG-TPITPNEYSSALDNGGVPDMKGGAGRPSPYMQ 1093
            TPLPGTAQTPLPGTAD+SS YNIPTGG TP TPNEYSS  D GG  +MKGG GRPSP+MQ
Sbjct: 118  TPLPGTAQTPLPGTADSSSMYNIPTGGSTPFTPNEYSSLNDTGGATEMKGGPGRPSPFMQ 177

Query: 1092 PPSPWLNQRPPLDVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGGY 913
            PPSPWLNQRPPLDVN+AYVEGRE+ +RGAS QP TQDFF   +GKRKREDF  QY+ GGY
Sbjct: 178  PPSPWLNQRPPLDVNVAYVEGREEVDRGASQQPMTQDFFMTAAGKRKREDFASQYNNGGY 237

Query: 912  IPQQDGAGDVLSDDLEVVQGSNTRYDSVNSIQQMFVLGGKLSSMIPQFDGPIPDPYDDVL 733
            IPQQDGA D + D ++  +GSN + + V SIQ         SS IPQ DGP  D YD+ L
Sbjct: 238  IPQQDGAADSIYDIMKDGEGSNIQLELVTSIQ-------AASSRIPQVDGP-TDHYDEAL 289

Query: 732  STPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXXXXXXXXX 553
            STPNIY YQGV NEDYNIVNTPAPN++QA TPAP+  ND                     
Sbjct: 290  STPNIYGYQGVVNEDYNIVNTPAPNDMQAPTPAPVLQND-DVDDDDEPLNENDDDDFDDV 348

Query: 552  XXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                 LNT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 349  DQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 401



 Score =  119 bits (299), Expect(2) = e-134
 Identities = 60/81 (74%), Positives = 69/81 (85%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA+STTSNVY+HVIEDV+SKVRDEFINNGGPG+S+LNELQGLWE+KMM AGAILG  +R+
Sbjct: 1    MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILNELQGLWEMKMMHAGAILGTTERN 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
            +  K     PIT  PVHDLNV
Sbjct: 61   SAPKGTG--PIT-TPVHDLNV 78


>ref|XP_012066966.1| PREDICTED: transcription initiation factor IIA large subunit
            [Jatropha curcas] gi|643735683|gb|KDP42211.1|
            hypothetical protein JCGZ_02941 [Jatropha curcas]
          Length = 407

 Score =  367 bits (942), Expect(2) = e-129
 Identities = 189/297 (63%), Positives = 212/297 (71%), Gaps = 5/297 (1%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGRPSPYMQP 1090
            TPLPG  QTPLPG+ADNSS YNIPTG T   P   S   D GG  + K   GRPSPYMQ 
Sbjct: 116  TPLPGNGQTPLPGSADNSSMYNIPTGPTSEYPTPVS---DTGGSTEAK--PGRPSPYMQA 170

Query: 1089 PSPWLNQRPPLDVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGGYI 910
            PSPW+NQRPPLDVN+AYVEGRE+ +RG SHQP TQDFF + SGKRKREDF  Q++ GG+I
Sbjct: 171  PSPWMNQRPPLDVNVAYVEGREEADRGNSHQPLTQDFFMMSSGKRKREDFATQFNNGGFI 230

Query: 909  PQQDGAGDVLSDDLEVVQGSNT--RYDSVNSIQ-QMFVLGGKLSSMIPQFDGPIPDPYDD 739
            PQQDGAGDV S+ L+  QG+ +  R D++ S   ++     +    IPQ DGPIPDPYDD
Sbjct: 231  PQQDGAGDVPSEALQASQGNGSLGRCDTITSANIEILSHATRRVLKIPQLDGPIPDPYDD 290

Query: 738  VLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDT--GXXXXXXXXXXXXXXX 565
            VLSTPNIYNYQGV NEDYNI NTPAPN+IQA+TPA  P ND                   
Sbjct: 291  VLSTPNIYNYQGVVNEDYNIANTPAPNDIQASTPAVAPQNDAVDDDDDEPLNEDDDDDDD 350

Query: 564  XXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                     +NT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 351  LDDVEQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 407



 Score =  126 bits (317), Expect(2) = e-129
 Identities = 63/82 (76%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
 Frame = -1

Query: 1613 MATST-TSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDR 1437
            MATS+ TS VY+HVIEDV++KVRDEFINNGGPG+SVLNELQG+WE+KMMQAG ILGPI+R
Sbjct: 1    MATSSATSTVYIHVIEDVINKVRDEFINNGGPGESVLNELQGIWEMKMMQAGVILGPIER 60

Query: 1436 SAMHKAAPGVPITPNPVHDLNV 1371
            S+  K  PG PIT  PVHDLNV
Sbjct: 61   SSAAKPVPGGPIT--PVHDLNV 80


>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
            gi|223540360|gb|EEF41931.1| protein with unknown function
            [Ricinus communis]
          Length = 383

 Score =  366 bits (940), Expect(2) = e-125
 Identities = 191/294 (64%), Positives = 213/294 (72%), Gaps = 2/294 (0%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGRPSPYMQP 1090
            TPLPGTAQTPLPG+ DNSS YNIPTG T   P   S   D+GG  + K  AGRPSPYMQP
Sbjct: 100  TPLPGTAQTPLPGSVDNSSMYNIPTGPTSEYPTPVS---DSGGSTEAK--AGRPSPYMQP 154

Query: 1089 PSPWLNQRPPLDVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGGYI 910
            PSPW+NQRPPLDVNIAYVEGRE+ +RG S+QP TQDFFT  SGKRKREDF  QY+ GG+I
Sbjct: 155  PSPWINQRPPLDVNIAYVEGREEADRGTSNQPLTQDFFTGASGKRKREDFAAQYNNGGFI 214

Query: 909  PQQDGAGDVLSDDLEVVQGSNTRYDSVNSIQQMFVLGGKLSSMIPQFDGPIPDPYDDVLS 730
            PQQDGAGD   + L+V + +    D +  +  +   G K    IPQ DGPIPDPYDDVLS
Sbjct: 215  PQQDGAGDTPFEVLQVERDTVISAD-IEILSSVTRRGLK----IPQLDGPIPDPYDDVLS 269

Query: 729  TPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDT--GXXXXXXXXXXXXXXXXXX 556
            TPNIYNYQGVANEDYNI NTPAPN++QA+TPA +P ND                      
Sbjct: 270  TPNIYNYQGVANEDYNIANTPAPNDLQASTPAIIPQNDVVDDDDDEPLNEDDDDDDDLDD 329

Query: 555  XXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                  +NT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 330  VDQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 383



 Score =  111 bits (278), Expect(2) = e-125
 Identities = 57/79 (72%), Positives = 66/79 (83%)
 Frame = -1

Query: 1607 TSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRSAM 1428
            ++TTS VY+HVIEDVV+KVRDEFINNG PG++VLNELQ +WELKMMQAG I GPI+RS+ 
Sbjct: 5    STTTSTVYIHVIEDVVNKVRDEFINNG-PGETVLNELQAIWELKMMQAGVICGPIERSSG 63

Query: 1427 HKAAPGVPITPNPVHDLNV 1371
             K  PG  IT  PVHDLNV
Sbjct: 64   AKTVPGGVIT--PVHDLNV 80


>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
            gi|508786697|gb|EOY33953.1| Transcription initiation
            factor IIA subunit 1 [Theobroma cacao]
          Length = 393

 Score =  339 bits (870), Expect(2) = e-120
 Identities = 188/305 (61%), Positives = 209/305 (68%), Gaps = 13/305 (4%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGG----TPITPNEYSSALDNGGVPDMKGGAGRPSP 1102
            TPL     TPLPG+AD S  YNIPTG     TP+T        D GG  D KG   RPSP
Sbjct: 100  TPLQTPVPTPLPGSADGS-MYNIPTGSSDYPTPVT--------DGGGNTDAKGA--RPSP 148

Query: 1101 YMQPPSPWLNQRPPL--DVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQY 928
            YMQ PSPW NQR PL  DVN+AYVEGR++ +RG SHQP TQDFF + SGKRKREDF  QY
Sbjct: 149  YMQSPSPWPNQRTPLSVDVNVAYVEGRDEVDRGPSHQPLTQDFFMMSSGKRKREDFTTQY 208

Query: 927  HTGG-YIPQQDGAGDVLSD--DLEVVQGSN--TRYDSVNSIQQMFVLG-GKLSSMIPQFD 766
            H GG YIPQQDGAGD + +    E  +GS+   R DS  + +   +    + SS IPQ D
Sbjct: 209  HNGGGYIPQQDGAGDAIYEVAKAEGSKGSDFLDRRDSTTTAKSEILAHLARSSSKIPQLD 268

Query: 765  GPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTG-XXXXXXX 589
            GPIPDPYDD+LSTPNIYNYQGV NEDYN+VNTPAPN++QAATPAP+  NDTG        
Sbjct: 269  GPIPDPYDDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQAATPAPVAQNDTGDDDDDEPL 328

Query: 588  XXXXXXXXXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAT 409
                             LNT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAT
Sbjct: 329  NEDDDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAT 388

Query: 408  GEFDF 394
            GEFDF
Sbjct: 389  GEFDF 393



 Score =  122 bits (306), Expect(2) = e-120
 Identities = 60/82 (73%), Positives = 71/82 (86%), Gaps = 1/82 (1%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA+STTS VY+HVIEDV++KVRDEFINNGGPG++VLNELQG+WE+KMMQAG + GPI+RS
Sbjct: 1    MASSTTSAVYIHVIEDVINKVRDEFINNGGPGETVLNELQGIWEMKMMQAGVVCGPIERS 60

Query: 1433 AMHK-AAPGVPITPNPVHDLNV 1371
            +  K   PG PIT  PVHDLNV
Sbjct: 61   SGQKQPTPGGPIT--PVHDLNV 80


>ref|XP_010685693.1| PREDICTED: transcription initiation factor IIA large subunit [Beta
            vulgaris subsp. vulgaris] gi|870853304|gb|KMT05185.1|
            hypothetical protein BVRB_7g173320 [Beta vulgaris subsp.
            vulgaris]
          Length = 389

 Score =  349 bits (895), Expect(2) = e-120
 Identities = 187/301 (62%), Positives = 211/301 (70%), Gaps = 9/301 (2%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGVP---DMKGGAGRPSPY 1099
            TPL    QTPLPGTAD SS YNIPTG     P++Y +   N GV    D+K G GRPSPY
Sbjct: 99   TPLQTPIQTPLPGTAD-SSMYNIPTG-----PSDYPTPTSNEGVGVPNDIKPGVGRPSPY 152

Query: 1098 MQPPSPWLNQRPPL--DVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYH 925
            MQPPSPW+NQRPPL  DVN+AYVEGRE+ +RG+S QP TQDFFT P+GKRKR++FPPQY 
Sbjct: 153  MQPPSPWMNQRPPLGVDVNVAYVEGREEVDRGSS-QPATQDFFTGPTGKRKRDEFPPQYQ 211

Query: 924  TGGYIPQQDGAGDVLSD--DLEVVQGSNTRYDSVNSIQQMFVLGGKLSSMIPQFDGPIPD 751
             GGYIPQQDGAGD   D  +LE++Q  +     V  +      G   SS IPQ DGPIPD
Sbjct: 212  GGGYIPQQDGAGDAAGDVFELEIIQSKSLGRSGVVKVTSALQKGS--SSRIPQLDGPIPD 269

Query: 750  PYDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXXX 571
            PY+D+LSTPNIYNYQ V NEDYN+VNTPAPN++QA TPAP   ND G             
Sbjct: 270  PYEDMLSTPNIYNYQPV-NEDYNVVNTPAPNDLQAGTPAPPIQNDLGDENGDDEPPLNEN 328

Query: 570  XXXXXXXXXXXL--NTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFD 397
                          NT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA+GEFD
Sbjct: 329  DDDDLDDIDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKASGEFD 388

Query: 396  F 394
            F
Sbjct: 389  F 389



 Score =  112 bits (281), Expect(2) = e-120
 Identities = 55/81 (67%), Positives = 64/81 (79%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            M TSTTS VY+HVIEDV+ KVR+EF+ +GGPG+ VL ELQGLWELKMMQAGA+L P +R 
Sbjct: 1    MTTSTTSAVYIHVIEDVIEKVREEFVVDGGPGEKVLQELQGLWELKMMQAGAVLQPSERP 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
             + K  PG  IT  PVHDLNV
Sbjct: 61   TVPKPVPGAAIT--PVHDLNV 79


>ref|XP_002282322.1| PREDICTED: transcription initiation factor IIA subunit 1 [Vitis
            vinifera] gi|297746029|emb|CBI16085.3| unnamed protein
            product [Vitis vinifera]
          Length = 393

 Score =  346 bits (888), Expect(2) = e-119
 Identities = 187/300 (62%), Positives = 208/300 (69%), Gaps = 8/300 (2%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGRPSPYMQP 1090
            TPL    QTPLPG  DNS  YNIPTG     P EY +A D GG  DMK  +GRP  YM P
Sbjct: 102  TPLQTPIQTPLPGMGDNS-MYNIPTG-----PTEYPAAQDGGGATDMK--SGRPPSYMPP 153

Query: 1089 PSPWLNQRPPL--DVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGG 916
            PSPW+ QRPPL  DVN+AYVEGR++G+RG S QP TQDFF + SGKRKREDFP QYHT G
Sbjct: 154  PSPWMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFPSQYHTSG 213

Query: 915  YIPQQDGAGDVLSD--DLEVVQGSNT--RYDSVNSI-QQMFVLGGKLSSMIPQFDGPIPD 751
            YIPQQDGAGD   +  ++EV QGSN+   +D +    +++F         IPQ DGPIPD
Sbjct: 214  YIPQQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSYVRIPQLDGPIPD 273

Query: 750  PYDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTG-XXXXXXXXXXXX 574
            PY+DVLSTPNIYNYQGV NEDYNIVNTPAPN+IQA TPA    ND G             
Sbjct: 274  PYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPAVGIQNDVGDDDDDEPPLNEND 333

Query: 573  XXXXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                        LNT HL+LAQFDKVTRTKS+WKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 334  DDDLDDVEQGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILFNKANGEFDF 393



 Score =  113 bits (283), Expect(2) = e-119
 Identities = 52/79 (65%), Positives = 63/79 (79%)
 Frame = -1

Query: 1607 TSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRSAM 1428
            +S TS VYV VIEDV++KVRDEF+NNGGPG+SVL+ELQG+WE+KM+QAG + GPI+RS  
Sbjct: 4    SSMTSTVYVSVIEDVINKVRDEFVNNGGPGESVLSELQGIWEMKMVQAGVVTGPIERSTA 63

Query: 1427 HKAAPGVPITPNPVHDLNV 1371
             K   G P    PVHDLNV
Sbjct: 64   PKQTSGAPAPTPPVHDLNV 82


>gb|KDO66627.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
          Length = 406

 Score =  353 bits (907), Expect(2) = e-119
 Identities = 189/298 (63%), Positives = 213/298 (71%), Gaps = 6/298 (2%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGRPSPYMQP 1090
            TPLPG+  TPLPGTADNS+ YNIPTG +       + A D+GG  + K G GRPS YM P
Sbjct: 116  TPLPGS--TPLPGTADNST-YNIPTGSSDYP----TPASDSGGNTEAKSGNGRPSSYMPP 168

Query: 1089 P-SPWLNQRPPL--DVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTG 919
            P SPW+N RPPL  DVN+AYVEGR++ +RG SHQP TQDFFT+ +GKRKREDFP QYH G
Sbjct: 169  PPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYHNG 228

Query: 918  GY-IPQQDGAGDVLSDDLEV-VQGSNTRYDSVNSI-QQMFVLGGKLSSMIPQFDGPIPDP 748
            GY IPQQDGAGD +S+  E+ V     R DSV +  +++F      S  IPQ DGPIPDP
Sbjct: 229  GYNIPQQDGAGDAMSEIFELEVSEFPGRQDSVTTANREIFANLASSSVKIPQLDGPIPDP 288

Query: 747  YDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXXXX 568
            YDDVLSTPNIYNYQGV NEDYNIVNTPAPN+IQA+TPA +  ND                
Sbjct: 289  YDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDDDDEPLNENDDD 348

Query: 567  XXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                      LNT HL+LAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKATGEFDF
Sbjct: 349  ELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406



 Score =  103 bits (258), Expect(2) = e-119
 Identities = 58/82 (70%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDR- 1437
            MATS T  VY+ VIEDV+SKVRDEF+NN GPG+SVLNELQG+WE+KM+QAG I   IDR 
Sbjct: 1    MATSATGMVYIRVIEDVISKVRDEFVNN-GPGESVLNELQGIWEMKMIQAGVI---IDRT 56

Query: 1436 SAMHKAAPGVPITPNPVHDLNV 1371
            SA  + APG PIT  PVHDLNV
Sbjct: 57   SAPKQPAPGGPIT--PVHDLNV 76


>ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citrus clementina]
            gi|568870376|ref|XP_006488381.1| PREDICTED: transcription
            initiation factor IIA subunit 1-like [Citrus sinensis]
            gi|557526833|gb|ESR38139.1| hypothetical protein
            CICLE_v10028561mg [Citrus clementina]
          Length = 406

 Score =  352 bits (902), Expect(2) = e-118
 Identities = 188/298 (63%), Positives = 212/298 (71%), Gaps = 6/298 (2%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGRPSPYMQP 1090
            TPLPG+  TPLPGTADNS+ YNIPTG +       + A D+GG  + K G GRPS YM P
Sbjct: 116  TPLPGS--TPLPGTADNST-YNIPTGSSDYP----TPASDSGGNTEAKSGNGRPSSYMPP 168

Query: 1089 P-SPWLNQRPPL--DVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTG 919
            P SPW+N RPPL  DVN+AYVEGR++ +RG SHQP TQDFFT+ +GKRKREDFP QYH G
Sbjct: 169  PPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYHNG 228

Query: 918  GY-IPQQDGAGDVLSDDLEV-VQGSNTRYDSVNSI-QQMFVLGGKLSSMIPQFDGPIPDP 748
            GY IPQQDGAGD + +  E+ V     R DSV +  +++F      S  IPQ DGPIPDP
Sbjct: 229  GYNIPQQDGAGDAMPEIFELEVSEFPGRQDSVTTANREIFANLASSSVKIPQLDGPIPDP 288

Query: 747  YDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXXXX 568
            YDDVLSTPNIYNYQGV NEDYNIVNTPAPN+IQA+TPA +  ND                
Sbjct: 289  YDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDDDDEPLNENDDD 348

Query: 567  XXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                      LNT HL+LAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKATGEFDF
Sbjct: 349  ELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406



 Score =  103 bits (258), Expect(2) = e-118
 Identities = 58/82 (70%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDR- 1437
            MATS T  VY+ VIEDV+SKVRDEF+NN GPG+SVLNELQG+WE+KM+QAG I   IDR 
Sbjct: 1    MATSATGMVYIRVIEDVISKVRDEFVNN-GPGESVLNELQGIWEMKMIQAGVI---IDRT 56

Query: 1436 SAMHKAAPGVPITPNPVHDLNV 1371
            SA  + APG PIT  PVHDLNV
Sbjct: 57   SAPKQPAPGGPIT--PVHDLNV 76


>emb|CDP09102.1| unnamed protein product [Coffea canephora]
          Length = 411

 Score =  431 bits (1109), Expect = e-118
 Identities = 210/292 (71%), Positives = 235/292 (80%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGRPSPYMQP 1090
            TPLPGTAQTPLPGTAD SS YNIPTGGTPITPNEYSS  D+GG P++K G GRPSPYMQP
Sbjct: 121  TPLPGTAQTPLPGTAD-SSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQP 179

Query: 1089 PSPWLNQRPPLDVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGGYI 910
            PSPWLNQRPPLDVN+AYVEGRE+GERGASHQP TQDFF + +GKRKR++F  QY  GGYI
Sbjct: 180  PSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFMMSAGKRKRDEFASQYPNGGYI 239

Query: 909  PQQDGAGDVLSDDLEVVQGSNTRYDSVNSIQQMFVLGGKLSSMIPQFDGPIPDPYDDVLS 730
            PQQDGAGD +S++L+V QGSNT++++  +  +M + GG+  S I Q DGPIPDPYDDVLS
Sbjct: 240  PQQDGAGDTISNELKVGQGSNTQHNTTIAGAEMSLQGGRAVSRISQLDGPIPDPYDDVLS 299

Query: 729  TPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXXXXXXXXXX 550
            TPNIYNYQGV NEDYNIVNTPAPN+IQAATPA +  NDT                     
Sbjct: 300  TPNIYNYQGVVNEDYNIVNTPAPNDIQAATPAAVTQNDTVDDDEDEPLNEDDDDELDDVD 359

Query: 549  XXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                LNTTHL+LAQFDKVTRTKSRWKCTLKDGIM INNKDILFNKATGEF+F
Sbjct: 360  QGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMRINNKDILFNKATGEFEF 411



 Score =  129 bits (325), Expect = 6e-27
 Identities = 63/81 (77%), Positives = 72/81 (88%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA+STTSNVY+HVIEDV++KVR+EFINNGGPG+SVL ELQGLWE+KMMQAGAILGPI+RS
Sbjct: 1    MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
            +  KA PGV     PVHDLNV
Sbjct: 61   SAPKATPGV----TPVHDLNV 77


>ref|XP_012475136.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Gossypium raimondii] gi|763741415|gb|KJB08914.1|
            hypothetical protein B456_001G112500 [Gossypium
            raimondii]
          Length = 391

 Score =  333 bits (853), Expect(2) = e-117
 Identities = 182/302 (60%), Positives = 207/302 (68%), Gaps = 10/302 (3%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSAL-DNGGVPDMKGGAGRPSPYMQ 1093
            TPL     TPLPG+AD S  YNIPTGG+     +Y + + DNG   D+KGG  RPSPYMQ
Sbjct: 99   TPLQTPVPTPLPGSADGS-MYNIPTGGS-----DYPTPVNDNGSNADIKGG--RPSPYMQ 150

Query: 1092 PPSPWLNQRPPL--DVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTG 919
             PSPW NQR PL  DVN+AYVEGRE+ +RG S+QP TQDFF + SGKRKREDF  QY  G
Sbjct: 151  SPSPWSNQRTPLSVDVNVAYVEGREEVDRGTSNQPLTQDFFMMSSGKRKREDFA-QYQNG 209

Query: 918  GYIPQQDGAGDVLSD--DLEVVQGSN---TRYDSVNSIQQMFVLGGKLSSMIPQFDGPIP 754
            GYIPQQDGAGD  S+    E  +G N    R+ +  +  +      + SS IPQ DGPIP
Sbjct: 210  GYIPQQDGAGDATSEVAKAEGSRGGNFLDRRHSTTTAKSKFLAELARSSSKIPQLDGPIP 269

Query: 753  DPYDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLND--TGXXXXXXXXXX 580
            D Y+D+LSTPNIYNYQGV NEDYN+VNTPAPN++QA+TPAP P ND              
Sbjct: 270  DSYEDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQASTPAPAPQNDIVDDDDDEPLNEDD 329

Query: 579  XXXXXXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF 400
                          LNT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF
Sbjct: 330  DDEDDLDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF 389

Query: 399  DF 394
            DF
Sbjct: 390  DF 391



 Score =  120 bits (301), Expect(2) = e-117
 Identities = 57/81 (70%), Positives = 71/81 (87%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA++TTS+VY++VIEDV++KVR+EFINNGGPG++VLNELQG+WE KMMQAG ILGPI+RS
Sbjct: 1    MASTTTSSVYINVIEDVINKVREEFINNGGPGEAVLNELQGIWEAKMMQAGVILGPIERS 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
            +  +  PG  IT  PVHDLNV
Sbjct: 61   SQKQPTPGSAIT--PVHDLNV 79


>ref|XP_012446718.1| PREDICTED: transcription initiation factor IIA large subunit
            [Gossypium raimondii] gi|763788823|gb|KJB55819.1|
            hypothetical protein B456_009G096500 [Gossypium
            raimondii]
          Length = 391

 Score =  332 bits (852), Expect(2) = e-117
 Identities = 179/300 (59%), Positives = 209/300 (69%), Gaps = 8/300 (2%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGV-PDMKGGAGRPSPYMQ 1093
            TPL     TPLPG+AD S  YNIPTG +     +Y + +++G    D+KGG  RPSPYMQ
Sbjct: 100  TPLQTPVPTPLPGSADGS-MYNIPTGSS-----DYPTPVNDGASNADVKGG--RPSPYMQ 151

Query: 1092 PPSPWLNQRPPL--DVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTG 919
             PSPW NQR PL  DVN+AYVEGR++ +RG S+QP TQDFF +P GKRKREDF  QY+ G
Sbjct: 152  SPSPWSNQRTPLSVDVNVAYVEGRDEVDRGTSNQPLTQDFFMMPPGKRKREDFATQYNNG 211

Query: 918  GYIPQQDGAGDVLSD--DLEVVQGSNT--RYDSVNSIQQMFVLGGKLSSM-IPQFDGPIP 754
            GYIPQQDGAGD  S+    E  +G N   R+DS  + +   +     SS+ I Q DGPIP
Sbjct: 212  GYIPQQDGAGDSTSEVAKTEGSKGCNFLGRHDSATTGKTNILAHFATSSLKISQLDGPIP 271

Query: 753  DPYDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXX 574
            DP++D+LSTPNIYNYQGV  EDYN+ NTPAPN++QAATPAP+  NDTG            
Sbjct: 272  DPFEDMLSTPNIYNYQGVVGEDYNVANTPAPNDLQAATPAPVAQNDTGDDDDDEPLNEDD 331

Query: 573  XXXXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                        LNT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 332  DDDDLDDVDQEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 391



 Score =  120 bits (300), Expect(2) = e-117
 Identities = 62/82 (75%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            M +STTS VY+HVIEDV+SKVRDEFINNGGPG++VLNELQGLWE KMMQAGAI GPI+RS
Sbjct: 1    MTSSTTSAVYIHVIEDVISKVRDEFINNGGPGEAVLNELQGLWETKMMQAGAICGPIERS 60

Query: 1433 AMHK-AAPGVPITPNPVHDLNV 1371
               K    G PIT  PVHDLNV
Sbjct: 61   TGQKQPTAGGPIT--PVHDLNV 80


>ref|XP_011032247.1| PREDICTED: transcription initiation factor IIA subunit 1-like isoform
            X1 [Populus euphratica]
          Length = 408

 Score =  337 bits (864), Expect(2) = e-115
 Identities = 181/301 (60%), Positives = 210/301 (69%), Gaps = 9/301 (2%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPI-TPNEYSSALDNGGVPDMKGGAGRPSPYMQ 1093
            TPLPG AQTPLPG+ DNSS YNIPTG +   TP       D GG  D  G AGRPSP+MQ
Sbjct: 117  TPLPGNAQTPLPGSVDNSSMYNIPTGSSDYPTPGS-----DTGGSTD--GKAGRPSPFMQ 169

Query: 1092 PPSPWLNQRPPL--DVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTG 919
            PP+ W++QRPPL  DVN+AYVEGR++ +RG SHQ  TQDFF +PSGKRKREDF P+Y+ G
Sbjct: 170  PPT-WMHQRPPLSVDVNVAYVEGRDEVDRGTSHQTLTQDFF-MPSGKRKREDFAPKYNNG 227

Query: 918  GYIPQQDGAGDVLSDDLEVVQGSNTRYDSVNSIQQMFVLGGKLSSM---IPQFDGPIPDP 748
            G+IPQQDGAGD  S+  +V QG++       S  +  V+  ++S     IPQ DGPIPDP
Sbjct: 228  GFIPQQDGAGDSASEVSQVSQGNDPLGRCDTSTTKNKVILARVSRSYLKIPQVDGPIPDP 287

Query: 747  YDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTGXXXXXXXXXXXXXX 568
            YDDV+STPNIYNYQGVANEDYNI NTPAPN++ A+TPA +  ND                
Sbjct: 288  YDDVVSTPNIYNYQGVANEDYNIANTPAPNDLLASTPAVVSQNDVADDDDDDEPLNEDDD 347

Query: 567  XXXXXXXXXXL---NTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFD 397
                          NT HL+LAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKATGEF+
Sbjct: 348  DDEDLDEVDQGEELNTQHLVLAQFDKVTRTKSRWKCILKDGIMHINNKDILFNKATGEFE 407

Query: 396  F 394
            F
Sbjct: 408  F 408



 Score =  107 bits (268), Expect(2) = e-115
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
 Frame = -1

Query: 1610 ATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRSA 1431
            ++  TS VY++VIEDV++KVRDEFINNGGPG++VL ELQGLWE KMMQAGAI G  +RS+
Sbjct: 3    SSDATSPVYINVIEDVINKVRDEFINNGGPGETVLYELQGLWEAKMMQAGAICGTAERSS 62

Query: 1430 MHK-AAPGVPITPNPVHDLNV 1371
             +K   PG PIT  PVHDLNV
Sbjct: 63   ANKLPVPGGPIT--PVHDLNV 81


>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoformX1 [Glycine max]
          Length = 391

 Score =  326 bits (836), Expect(2) = e-115
 Identities = 180/306 (58%), Positives = 204/306 (66%), Gaps = 14/306 (4%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEY-SSALDNGGVPDMKGGAGRPSPYMQ 1093
            TPL    QTPLPGT DNS+ YNIPTG     P++Y SS  D GG  D KG   RP+PYMQ
Sbjct: 99   TPLQTPIQTPLPGTGDNST-YNIPTG-----PSDYPSSGNDTGGNADGKGA--RPAPYMQ 150

Query: 1092 PPSPWLNQRPPLDVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGGY 913
             PSPW+NQRPPLDVN+AYVEGR++ +RG S+QP TQDFFT+PSGKRKR D   QY+ GGY
Sbjct: 151  SPSPWMNQRPPLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGGY 210

Query: 912  IPQQDGAGDVLSDDLEV-VQGSNTRYDSVNSIQQMFVLGGKLS-------SMIPQFDGPI 757
            IPQQDGAGD    D E+ V G     +S ++I +     GK+S       S IPQ DGPI
Sbjct: 211  IPQQDGAGDATHGDFEIEVSGRGISINSHHTISK-----GKMSADLERSTSRIPQLDGPI 265

Query: 756  PDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTG-----XXXXXX 592
            P   DDVLSTPNIYNY  V +EDYNI NTPAP E+ A+TPA L  N+ G           
Sbjct: 266  PYDDDDVLSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEVGNDFDDDDDDEP 325

Query: 591  XXXXXXXXXXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 412
                               NT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA
Sbjct: 326  PLNEEDDDDLDDMEQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 385

Query: 411  TGEFDF 394
            TGEF+F
Sbjct: 386  TGEFEF 391



 Score =  118 bits (295), Expect(2) = e-115
 Identities = 58/81 (71%), Positives = 65/81 (80%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA STTS VY+ VIEDV+ KVRDEF+NNGGPG+ VL ELQ +WE KMMQAGA+LGPI+RS
Sbjct: 1    MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERS 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
               K  PG PIT  PVHDLNV
Sbjct: 61   TAAKPTPGGPIT--PVHDLNV 79


>ref|XP_010033104.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Eucalyptus grandis] gi|629086291|gb|KCW52648.1|
            hypothetical protein EUGRSUZ_J02029 [Eucalyptus grandis]
          Length = 393

 Score =  326 bits (835), Expect(2) = e-114
 Identities = 172/298 (57%), Positives = 200/298 (67%), Gaps = 6/298 (2%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEYSSALDNGGVPDMKGGAGRPSPYMQP 1090
            TPL     TPLPGT D S+ YNIPTG +           ++ G  ++K  AGRPSPYM P
Sbjct: 100  TPLQTPIPTPLPGTVD-SNLYNIPTGSSDYPTPSNDGVGNSSGNTEIK--AGRPSPYMPP 156

Query: 1089 PSPWLNQRPPL--DVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGG 916
            PSPW+NQRPPL  DVN+AY+E REDG+RG SHQP TQDFFT  SGKRKR+DF   Y  GG
Sbjct: 157  PSPWMNQRPPLGVDVNVAYMEAREDGDRGTSHQPHTQDFFTA-SGKRKRDDFVQHYQNGG 215

Query: 915  YIPQQDGAGDVLSDDLEVVQGSNTRYDSVNSIQQMFVLGGKLSSMIPQFDGPIPDPYDDV 736
            YIPQQDGAGD + +D ++ + + T   +    +QM    G+  S IPQ DG  PDPYD++
Sbjct: 216  YIPQQDGAGDAVFEDSQITEKTTTLPAADTRNRQMLAHVGRPLSKIPQVDGQTPDPYDEM 275

Query: 735  LSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTG----XXXXXXXXXXXXXX 568
            LSTPNIYNYQGV +EDYNI +TPAPN++QA TPA    ND G                  
Sbjct: 276  LSTPNIYNYQGVVSEDYNIASTPAPNDLQAGTPAIGVHNDVGEDEDEDEPPLNENDDDDD 335

Query: 567  XXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 394
                      LNT HL+LAQFDKVTRTKS+WKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 336  DLDDVDNGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILFNKATGEFDF 393



 Score =  115 bits (289), Expect(2) = e-114
 Identities = 56/80 (70%), Positives = 66/80 (82%)
 Frame = -1

Query: 1610 ATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRSA 1431
            A STTS+VY+HVI DV++KVR+EF+NNGGPG+ VLNELQG+WE KMMQAGA+LGP+DRSA
Sbjct: 3    APSTTSSVYLHVIGDVITKVREEFVNNGGPGEEVLNELQGMWETKMMQAGAVLGPVDRSA 62

Query: 1430 MHKAAPGVPITPNPVHDLNV 1371
              KA  G      PVHDLNV
Sbjct: 63   TAKAPAGGAAA--PVHDLNV 80


>gb|KHN30144.1| Transcription initiation factor IIA large subunit [Glycine soja]
          Length = 390

 Score =  323 bits (827), Expect(2) = e-114
 Identities = 180/306 (58%), Positives = 204/306 (66%), Gaps = 14/306 (4%)
 Frame = -3

Query: 1269 TPLPGTAQTPLPGTADNSSFYNIPTGGTPITPNEY-SSALDNGGVPDMKGGAGRPSPYMQ 1093
            TPL    QTPLPGT DNS+ YNIPTG     P++Y SS  D GG  D KG   RP+PYMQ
Sbjct: 99   TPLQTPIQTPLPGTGDNST-YNIPTG-----PSDYPSSGNDTGGNADGKGA--RPAPYMQ 150

Query: 1092 PPSPWLNQRPPLDVNIAYVEGREDGERGASHQPTTQDFFTLPSGKRKREDFPPQYHTGGY 913
             PSPW+NQRPPLDVN+AYVEGR++ +RG S+QP TQDFFT+PSGKRKR D   QY+ GGY
Sbjct: 151  SPSPWMNQRPPLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGGY 210

Query: 912  IPQQDGAGDVLSDDLEV-VQGSNTRYDSVNSIQQMFVLGGKLS-------SMIPQFDGPI 757
            IPQQDGAGD    D E+ V G     +S ++I +     GK+S       S IPQ DGPI
Sbjct: 211  IPQQDGAGDATHGDFEIEVSGRGISINSHHTISK-----GKMSADLERSTSRIPQLDGPI 265

Query: 756  PDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPNEIQAATPAPLPLNDTG-----XXXXXX 592
            P   DDVLSTPNIYNY  V +EDYNI NTPAP E+ A+TPA L  N+ G           
Sbjct: 266  PYD-DDVLSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEVGNDFDDDDDDEP 324

Query: 591  XXXXXXXXXXXXXXXXXXLNTTHLILAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 412
                               NT HL+LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA
Sbjct: 325  PLNEEDDDDLDDMEQGDDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 384

Query: 411  TGEFDF 394
            TGEF+F
Sbjct: 385  TGEFEF 390



 Score =  118 bits (295), Expect(2) = e-114
 Identities = 58/81 (71%), Positives = 65/81 (80%)
 Frame = -1

Query: 1613 MATSTTSNVYVHVIEDVVSKVRDEFINNGGPGDSVLNELQGLWELKMMQAGAILGPIDRS 1434
            MA STTS VY+ VIEDV+ KVRDEF+NNGGPG+ VL ELQ +WE KMMQAGA+LGPI+RS
Sbjct: 1    MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERS 60

Query: 1433 AMHKAAPGVPITPNPVHDLNV 1371
               K  PG PIT  PVHDLNV
Sbjct: 61   TAAKPTPGGPIT--PVHDLNV 79