BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00001391
         (1984 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075762.1| PREDICTED: RNA polymerase sigma factor sigA ...   485   e-169
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA ...   459   e-165
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   470   e-164
ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-...   466   e-164
ref|XP_009601815.1| PREDICTED: RNA polymerase sigma factor sigA-...   458   e-163
ref|XP_009771934.1| PREDICTED: RNA polymerase sigma factor sigA ...   461   e-163
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      461   e-163
ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-...   469   e-162
ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA ...   465   e-162
ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA ...   467   e-160
gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   462   e-160
gb|AKC88633.1| sigma factor [Melianthus villosus]                     459   e-160
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   465   e-160
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   460   e-159
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   460   e-159
emb|CDP04910.1| unnamed protein product [Coffea canephora]            470   e-158
ref|XP_012492333.1| PREDICTED: RNA polymerase sigma factor sigA-...   459   e-157
ref|XP_009629626.1| PREDICTED: RNA polymerase sigma factor sigA-...   457   e-157
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   461   e-156
ref|XP_009629625.1| PREDICTED: RNA polymerase sigma factor sigA-...   457   e-156

>ref|XP_011075762.1| PREDICTED: RNA polymerase sigma factor sigA [Sesamum indicum]
          Length = 505

 Score =  485 bits (1248), Expect(2) = e-169
 Identities = 255/335 (76%), Positives = 277/335 (82%), Gaps = 14/335 (4%)
 Frame = -3

Query: 1286 QISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLK 1107
            Q++  +Q RS++SPEL QNRLKGYVKGVVSEELLTH +VVQLS+KIKAGLLLEE KSRLK
Sbjct: 170  QLTTSRQWRSIVSPELLQNRLKGYVKGVVSEELLTHAQVVQLSEKIKAGLLLEEQKSRLK 229

Query: 1106 ERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMA 927
            ERLG +PSDEQLATSLRI+R  LQSK IECSLAR+KL MSNIRLVMSIAQRYDNMGAEMA
Sbjct: 230  ERLGFEPSDEQLATSLRISRTNLQSKLIECSLARDKLAMSNIRLVMSIAQRYDNMGAEMA 289

Query: 926  DXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX--------------RLGL 789
            D            IEKFDSSKG+KIST                             RL L
Sbjct: 290  DLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSL 349

Query: 788  IRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETL 609
            IRNAKA+LEEKGI PS+DRIAECLNMSQKKV+NATEAI+KVFSLDREAFPSLNGLPGETL
Sbjct: 350  IRNAKARLEEKGITPSIDRIAECLNMSQKKVKNATEAITKVFSLDREAFPSLNGLPGETL 409

Query: 608  HSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISR 429
            HSYIAD  +ENNPWHGVDEWALKDEVDKL++ TLRERE+EIIRLYYGL+NECLTWEDISR
Sbjct: 410  HSYIADNHVENNPWHGVDEWALKDEVDKLINLTLREREREIIRLYYGLDNECLTWEDISR 469

Query: 428  RIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            RIGLSRERVRQVGLVALEKLKHAARKRRLD ML++
Sbjct: 470  RIGLSRERVRQVGLVALEKLKHAARKRRLDTMLVQ 504



 Score =  139 bits (350), Expect(2) = e-169
 Identities = 83/143 (58%), Positives = 101/143 (70%), Gaps = 8/143 (5%)
 Frame = -1

Query: 1747 LMMATTAVIGLSSGKRLL-SSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSN 1571
            ++MAT AVIGLS+GKRLL SS F  SD  +KLAC +D   P +QI  S KN ITAKKSSN
Sbjct: 1    MIMATAAVIGLSTGKRLLLSSTFSYSDLSDKLACTTD---PHYQIA-STKNAITAKKSSN 56

Query: 1570 YGPTFLSNRHPQ-SIKALKEHVDTASNPCSVEQWP------QGEENSDPDYLVDAFLLLQ 1412
                F+SNR P  S++ALKEHVDTASN C++E W         +E +DP+YLVDA LLLQ
Sbjct: 57   ----FISNRRPPASVRALKEHVDTASNNCTLEPWLIHGSTLSTDETTDPEYLVDAVLLLQ 112

Query: 1411 KSMLEKQWNLSPDTAVITDMPRE 1343
            KSMLEKQWNLS +T     +P++
Sbjct: 113  KSMLEKQWNLSAETTTKAVIPKD 135


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA [Solanum lycopersicum]
          Length = 509

 Score =  459 bits (1181), Expect(2) = e-165
 Identities = 245/342 (71%), Positives = 272/342 (79%), Gaps = 14/342 (4%)
 Frame = -3

Query: 1307 RKSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLE 1128
            +KSS T  IS  K LRS++ P+L QNRLKGYVKG+VSEELLTH EV+QLSKKIK GL +E
Sbjct: 168  QKSSAT-PISATKPLRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVE 226

Query: 1127 EHKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYD 948
            E KSRLKERLGC+PSD+QLA SL+++R +LQS  IECSLARE+L+MSN+RLVMSIAQRYD
Sbjct: 227  EQKSRLKERLGCEPSDDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYD 286

Query: 947  NMGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX----------- 801
            NMGAEMAD            IEKFD SKGYKIST                          
Sbjct: 287  NMGAEMADLVQGGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTH 346

Query: 800  ---RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLN 630
               RLGLIRNAK +LEEKGI PSV+ IA  LNMSQKKVRNATEA SKV+SLDRE FPSLN
Sbjct: 347  LHERLGLIRNAKMRLEEKGINPSVNNIAASLNMSQKKVRNATEASSKVYSLDREVFPSLN 406

Query: 629  GLPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECL 450
            GLPG TLHSYIAD  +ENNPWHGVD WALKDEV+ L+SSTLRERE+EIIRLYYGL++ECL
Sbjct: 407  GLPGTTLHSYIADNHLENNPWHGVDVWALKDEVNNLISSTLREREREIIRLYYGLDSECL 466

Query: 449  TWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            TWEDIS+RIGLSRERVRQVGLVALEKLKHAARKRRLDAML+K
Sbjct: 467  TWEDISKRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLIK 508



 Score =  154 bits (388), Expect(2) = e-165
 Identities = 82/140 (58%), Positives = 102/140 (72%), Gaps = 6/140 (4%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MMATTAVIGLS+GKRLLSS+FY SD  EKL+C+SDH LP HQ+ P+ KNVI+AKKSS+Y 
Sbjct: 1    MMATTAVIGLSAGKRLLSSSFYYSDLNEKLSCSSDHSLPCHQV-PTVKNVISAKKSSDYS 59

Query: 1564 PTFLSNRHPQSIKALKEHVDTASNPCSVEQW------PQGEENSDPDYLVDAFLLLQKSM 1403
            P+ +S+R  QS+KALKEHVD AS+P  V+ W       Q E + + D  V+  LLLQKSM
Sbjct: 60   PSCVSSRKLQSVKALKEHVDIASDPSDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKSM 119

Query: 1402 LEKQWNLSPDTAVITDMPRE 1343
            LEKQWNLS +  +     R+
Sbjct: 120  LEKQWNLSAEETLTASTQRK 139


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  470 bits (1209), Expect(2) = e-164
 Identities = 248/341 (72%), Positives = 279/341 (81%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            +S  TVQ +  KQL+S +SPEL QNRLKGYVKGVVSEELL+H EVV+LS+ IKAGL LE+
Sbjct: 167  QSKFTVQANVFKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLED 226

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
            HKSRLKERLGCDPSDEQ+ATSL+I+RAELQSK I CSLAREKL MSN+RLVMSIAQRYDN
Sbjct: 227  HKSRLKERLGCDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDN 286

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
            MGAEMAD            IEKFDSSKG++IST                           
Sbjct: 287  MGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHL 346

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RLGLIRNAK +LEEKG+ PS+DRIAE LN+SQKKVRNATEA+SKVFSLDREAFPSLNG
Sbjct: 347  HERLGLIRNAKIRLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNG 406

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGET HSYIAD  +ENNPWHGVD+WALKDEV+KL++ TL+EREQEIIRLYYGL+NE LT
Sbjct: 407  LPGETHHSYIADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLT 466

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDIS+RIGLSRERVRQVGLVALEKLKHAARK++L+AML+K
Sbjct: 467  WEDISKRIGLSRERVRQVGLVALEKLKHAARKKKLEAMLVK 507



 Score =  140 bits (353), Expect(2) = e-164
 Identities = 83/137 (60%), Positives = 96/137 (70%), Gaps = 6/137 (4%)
 Frame = -1

Query: 1741 MATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYGP 1562
            MAT AVIGLS+GKRLLSS FY SD  EKL+  ++H L  +QI  S K +I AKKSSNYGP
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQI-TSTKTLIVAKKSSNYGP 59

Query: 1561 TF-LSNRHPQSIKALKEHVDTASNPCSVEQW-----PQGEENSDPDYLVDAFLLLQKSML 1400
            +F  SNR+ QSIKALKEHVDTAS P +            EE+SD DY V+A LLLQKSML
Sbjct: 60   SFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSML 119

Query: 1399 EKQWNLSPDTAVITDMP 1349
            EKQWNLS +    +D P
Sbjct: 120  EKQWNLSFERTDSSDSP 136


>ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  466 bits (1200), Expect(2) = e-164
 Identities = 248/336 (73%), Positives = 274/336 (81%), Gaps = 14/336 (4%)
 Frame = -3

Query: 1289 VQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRL 1110
            +Q +K KQL S++SPEL ++   GYVKGV+SEELLTH EVVQLSKKIKAGL LEEHK RL
Sbjct: 171  MQPTKRKQLGSMVSPELLKSHY-GYVKGVISEELLTHAEVVQLSKKIKAGLSLEEHKLRL 229

Query: 1109 KERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEM 930
            KERLGCDPSDEQLA+SLRI+RAELQSK IECSLAREKLTMSN+RLVMSIAQ+YDNMGAEM
Sbjct: 230  KERLGCDPSDEQLASSLRISRAELQSKVIECSLAREKLTMSNVRLVMSIAQKYDNMGAEM 289

Query: 929  ADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX--------------RLG 792
            AD            IEKFDSSKG+KIST                             RL 
Sbjct: 290  ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLC 349

Query: 791  LIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGET 612
            LIRNAK +L EKGI PS+DRIAECLNMS+KKVRNATEA++KVFSLDREAFPSLNGLP ET
Sbjct: 350  LIRNAKIRLAEKGITPSIDRIAECLNMSEKKVRNATEAVNKVFSLDREAFPSLNGLPRET 409

Query: 611  LHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDIS 432
            LHSYIAD R+ENNPWHGVDEW+LKDEV+ LLS+TL ERE++IIRLYYGL+ ECLTWEDIS
Sbjct: 410  LHSYIADNRLENNPWHGVDEWSLKDEVNNLLSTTLEERERDIIRLYYGLDKECLTWEDIS 469

Query: 431  RRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            RRIGLSRERVRQVGLVALEKLKHAARK+RLD ML+K
Sbjct: 470  RRIGLSRERVRQVGLVALEKLKHAARKKRLDTMLVK 505



 Score =  142 bits (357), Expect(2) = e-164
 Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 5/138 (3%)
 Frame = -1

Query: 1741 MATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYGP 1562
            MAT AVIGLS+GKRLL+S FY SD  ++L    DH L Q+Q   SAKNVI A+KSSN+G 
Sbjct: 1    MATAAVIGLSAGKRLLNSTFYYSDVTDRLLSVYDHGLAQYQAT-SAKNVIIARKSSNFGD 59

Query: 1561 TFLSNRHPQSIKALKEHVDTASNPCSVEQWPQG-----EENSDPDYLVDAFLLLQKSMLE 1397
            +F SN+H QSI+ALKEHV+T S P + + W Q      EEN+D DY VDA LLLQK +LE
Sbjct: 60   SFPSNQHIQSIRALKEHVNTLSTPSTADVWLQSSGLLEEENTDLDYSVDALLLLQKFLLE 119

Query: 1396 KQWNLSPDTAVITDMPRE 1343
            KQWNLS +  +    P E
Sbjct: 120  KQWNLSFEQTITDGAPGE 137


>ref|XP_009601815.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nicotiana
            tomentosiformis]
          Length = 508

 Score =  458 bits (1178), Expect(2) = e-163
 Identities = 245/342 (71%), Positives = 271/342 (79%), Gaps = 14/342 (4%)
 Frame = -3

Query: 1307 RKSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLE 1128
            R SS T  I+  K LRS+I PEL QNRLKGYVKGVVSEELLTH EV+QLSKKI+ GL LE
Sbjct: 167  RNSSATPTIA-AKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLE 225

Query: 1127 EHKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYD 948
            E KSRLKERLGC+PSD+QLA SL+++R +LQS  IECSLARE+L MSN+RLVMSIAQRYD
Sbjct: 226  EQKSRLKERLGCEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYD 285

Query: 947  NMGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX----------- 801
            N+GAEMAD            IEKFD SKGYKIST                          
Sbjct: 286  NVGAEMADLVQGGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTY 345

Query: 800  ---RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLN 630
               RL LIRNAK +LEEKGI PSV+ IA  LNMSQKKVRNATEA SK++SLDREAFPSLN
Sbjct: 346  LHERLSLIRNAKTRLEEKGIIPSVNDIAASLNMSQKKVRNATEASSKMYSLDREAFPSLN 405

Query: 629  GLPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECL 450
            GLPGETLHSYIAD  +ENNPWHGVD WALKDEV+ L+SSTLR+RE+EIIRLYYGL+NECL
Sbjct: 406  GLPGETLHSYIADNHLENNPWHGVDIWALKDEVNNLISSTLRDREREIIRLYYGLDNECL 465

Query: 449  TWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            TWEDIS+RIGLSRERVRQVGLVALEKLKHAARKR+LDAML+K
Sbjct: 466  TWEDISKRIGLSRERVRQVGLVALEKLKHAARKRQLDAMLIK 507



 Score =  148 bits (374), Expect(2) = e-163
 Identities = 82/139 (58%), Positives = 95/139 (68%), Gaps = 5/139 (3%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MMAT AVIGLS+GKRLLSS+FY SD  EKL C S H LP HQ+ PS KNVITAKKSS+Y 
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDLNEKLNCTSGHSLPCHQV-PSVKNVITAKKSSDYS 59

Query: 1564 PTFLSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSML 1400
            P+ +S+R PQS KALKEHVD   +P  V  W +       E+ D D  V+  LLLQKSML
Sbjct: 60   PSCVSSRKPQSAKALKEHVDITDDPSDVPSWFEMYEQLQNESDDEDDSVEVLLLLQKSML 119

Query: 1399 EKQWNLSPDTAVITDMPRE 1343
            EKQWNLS +  +I     E
Sbjct: 120  EKQWNLSLEQTLIASPQHE 138


>ref|XP_009771934.1| PREDICTED: RNA polymerase sigma factor sigA [Nicotiana sylvestris]
          Length = 508

 Score =  461 bits (1185), Expect(2) = e-163
 Identities = 243/341 (71%), Positives = 270/341 (79%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            + S+    S  K LRS+I PEL QNRLKGYVKGVVSEELLTH EV+QLSKKI+ GL LEE
Sbjct: 167  RHSSATPTSAAKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEE 226

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
             KSRLKERLGC+PSD+QLA SL+++R +LQS  IECSLARE+L MSN+RLVMSIAQRYDN
Sbjct: 227  QKSRLKERLGCEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDN 286

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
            +GAEMAD            IEKFD SKGYKIST                           
Sbjct: 287  VGAEMADLVQGGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYL 346

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RL LIRNAKA+LEEKGI PSV+ IA  LNMSQKKVRNATEA SK++SLDREAFPSLNG
Sbjct: 347  HERLSLIRNAKARLEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNG 406

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGETLHSYIAD  +ENNPWHGVD WALKDEV+ L+SSTLR+RE+EIIRLYYGL+NECLT
Sbjct: 407  LPGETLHSYIADNHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLT 466

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDIS+RIGLSRERVRQVGLVALEKLKHAARKR+LDAML+K
Sbjct: 467  WEDISKRIGLSRERVRQVGLVALEKLKHAARKRQLDAMLIK 507



 Score =  143 bits (360), Expect(2) = e-163
 Identities = 77/127 (60%), Positives = 91/127 (71%), Gaps = 5/127 (3%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MM+T AVIGLS+GKRLLSS+FY SD  EKL C SDH LP H + PS KNVITAKKSS+Y 
Sbjct: 1    MMSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHV-PSIKNVITAKKSSDYS 59

Query: 1564 PTFLSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSML 1400
            P+ +S+R  QS K+LKEHVD  ++P  V  W +       E+ D D  V+  LLLQKSML
Sbjct: 60   PSCVSSRKSQSTKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSML 119

Query: 1399 EKQWNLS 1379
            EKQWNLS
Sbjct: 120  EKQWNLS 126


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  461 bits (1185), Expect(2) = e-163
 Identities = 243/341 (71%), Positives = 270/341 (79%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            + S+    S  K LRS+I PEL QNRLKGYVKGVVSEELLTH EV+QLSKKI+ GL LEE
Sbjct: 167  RHSSATPTSAAKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEE 226

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
             KSRLKERLGC+PSD+QLA SL+++R +LQS  IECSLARE+L MSN+RLVMSIAQRYDN
Sbjct: 227  QKSRLKERLGCEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDN 286

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
            +GAEMAD            IEKFD SKGYKIST                           
Sbjct: 287  VGAEMADLVQGGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYL 346

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RL LIRNAKA+LEEKGI PSV+ IA  LNMSQKKVRNATEA SK++SLDREAFPSLNG
Sbjct: 347  HERLSLIRNAKARLEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNG 406

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGETLHSYIAD  +ENNPWHGVD WALKDEV+ L+SSTLR+RE+EIIRLYYGL+NECLT
Sbjct: 407  LPGETLHSYIADNHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLT 466

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDIS+RIGLSRERVRQVGLVALEKLKHAARKR+LDAML+K
Sbjct: 467  WEDISKRIGLSRERVRQVGLVALEKLKHAARKRQLDAMLIK 507



 Score =  143 bits (360), Expect(2) = e-163
 Identities = 77/127 (60%), Positives = 91/127 (71%), Gaps = 5/127 (3%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MM+T AVIGLS+GKRLLSS+FY SD  EKL C SDH LP H + PS KNVITAKKSS+Y 
Sbjct: 1    MMSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHV-PSIKNVITAKKSSDYS 59

Query: 1564 PTFLSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSML 1400
            P+ +S+R  QS K+LKEHVD  ++P  V  W +       E+ D D  V+  LLLQKSML
Sbjct: 60   PSCVSSRKSQSAKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSML 119

Query: 1399 EKQWNLS 1379
            EKQWNLS
Sbjct: 120  EKQWNLS 126


>ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
            gi|720061510|ref|XP_010275190.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Nelumbo nucifera]
            gi|720061513|ref|XP_010275191.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  469 bits (1208), Expect(2) = e-162
 Identities = 246/339 (72%), Positives = 275/339 (81%), Gaps = 14/339 (4%)
 Frame = -3

Query: 1298 STTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHK 1119
            S+ +Q ++ + L S++S EL Q+RLKGYVKGV+SEELLTH EVVQLSKKIK G+ LEEHK
Sbjct: 177  SSMMQTTRRRHLGSMVSEELLQSRLKGYVKGVISEELLTHSEVVQLSKKIKVGISLEEHK 236

Query: 1118 SRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMG 939
             RLKERLGC+PSDEQLATSLRI+RAELQ K IECSLAREK+ MSN+RLVMSIA +YDNMG
Sbjct: 237  MRLKERLGCEPSDEQLATSLRISRAELQMKMIECSLAREKIAMSNVRLVMSIAHKYDNMG 296

Query: 938  AEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX-------------- 801
            AEMAD            IEKFDSSKG KIST                             
Sbjct: 297  AEMADLVQGGLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPSHMHE 356

Query: 800  RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLP 621
            RL LIRNAK +LEEKGI PS+DRIAECLN+SQKKVRNATEA++KV SLDREAFPSLNGLP
Sbjct: 357  RLSLIRNAKIRLEEKGITPSIDRIAECLNISQKKVRNATEAVNKVISLDREAFPSLNGLP 416

Query: 620  GETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWE 441
            GETLHSYIAD RIENNPWHGVDEW+LKDEV+ LL++TLRERE++IIRLYYGL+ ECLTWE
Sbjct: 417  GETLHSYIADNRIENNPWHGVDEWSLKDEVNNLLNTTLRERERDIIRLYYGLDEECLTWE 476

Query: 440  DISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            DISRRIGLSRERVRQVGLVALEKLKHAARK+RLDAML+K
Sbjct: 477  DISRRIGLSRERVRQVGLVALEKLKHAARKKRLDAMLVK 515



 Score =  132 bits (333), Expect(2) = e-162
 Identities = 77/138 (55%), Positives = 96/138 (69%), Gaps = 5/138 (3%)
 Frame = -1

Query: 1741 MATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYGP 1562
            MAT AVIGL++GKRLLSS FY SD  ++LA   DH L Q+Q  PS K+V+ AKKSSN+  
Sbjct: 11   MATAAVIGLNAGKRLLSSTFYYSDVTDRLASVYDHGLAQYQTAPS-KSVVIAKKSSNFDH 69

Query: 1561 TFLSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSMLE 1397
             F SNRH QSIKALKEH++T S   + + W Q      E NSD DY ++A LLLQKS+LE
Sbjct: 70   DFASNRHNQSIKALKEHLNTFST-STEDMWLQTSDHLEEGNSDLDYSLEALLLLQKSLLE 128

Query: 1396 KQWNLSPDTAVITDMPRE 1343
            KQWNLS + ++    P+E
Sbjct: 129  KQWNLSFEKSMRKGAPKE 146


>ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
            gi|802585167|ref|XP_012070279.1| PREDICTED: RNA
            polymerase sigma factor sigA [Jatropha curcas]
            gi|643732469|gb|KDP39565.1| hypothetical protein
            JCGZ_02585 [Jatropha curcas]
          Length = 508

 Score =  465 bits (1196), Expect(2) = e-162
 Identities = 248/341 (72%), Positives = 274/341 (80%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            +S + VQ S  KQL+S +SPEL  NRLKGYVKG+VSEELLTH EVV LS+ IKAGL LEE
Sbjct: 167  QSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEE 226

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
            HKSRLK+RLGCDPSDEQLATSLRI+ A+L+SK I CSLAREKL MSN+RLVMSIAQRYDN
Sbjct: 227  HKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDN 286

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
            MGAEMAD            IEKFDSSKG+KIST                           
Sbjct: 287  MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 346

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RLGLIRNAK +LEEKG+ PS+DRIAE LNMSQKKVRNATEAISKVFSLDREAFPSLNG
Sbjct: 347  HERLGLIRNAKIRLEEKGVTPSIDRIAESLNMSQKKVRNATEAISKVFSLDREAFPSLNG 406

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGET HSYIAD   ENNPWHGVDEWALKDEV+KL+  TL++RE+EIIRLYYGL+NE LT
Sbjct: 407  LPGETHHSYIADNCPENNPWHGVDEWALKDEVNKLIDLTLQQREREIIRLYYGLDNETLT 466

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDIS+RIGLSRERVRQVGLVALEKLKHAARK++L+AML+K
Sbjct: 467  WEDISKRIGLSRERVRQVGLVALEKLKHAARKKKLEAMLVK 507



 Score =  136 bits (342), Expect(2) = e-162
 Identities = 84/137 (61%), Positives = 96/137 (70%), Gaps = 6/137 (4%)
 Frame = -1

Query: 1741 MATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYGP 1562
            MAT AVIGL +GKRLLSS FY SD  EKL   +DH L  +Q   S KNVI AKKSSNYG 
Sbjct: 1    MATAAVIGLHAGKRLLSSTFYYSDLTEKLFNVNDHGLTHYQS-SSTKNVIVAKKSSNYGS 59

Query: 1561 TFLS-NRHPQSIKALKEHVDTASNPCSV----EQWPQGEE-NSDPDYLVDAFLLLQKSML 1400
            +F S NR+ QSIKALKEHVDTAS+P +     E +   EE +SD DY V+A LLLQKSML
Sbjct: 60   SFQSSNRNAQSIKALKEHVDTASSPSTAATGFETFVDIEEASSDLDYSVEALLLLQKSML 119

Query: 1399 EKQWNLSPDTAVITDMP 1349
            EKQWNLS +    +D P
Sbjct: 120  EKQWNLSFERTASSDSP 136


>ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA [Prunus mume]
          Length = 512

 Score =  467 bits (1201), Expect(2) = e-160
 Identities = 246/341 (72%), Positives = 274/341 (80%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            KS+  +  S  K LR+++SPEL QNR+KGYVKGV+SE+LLTH EVV+LSKKIK GL +EE
Sbjct: 171  KSTCVMHPSTNKPLRAIVSPELLQNRVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEE 230

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
            HKSRLKERLGC+PSDEQLATSLRI+RA+LQSK IEC LAREKL MSN+RLVMSIAQRYDN
Sbjct: 231  HKSRLKERLGCEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDN 290

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
            MGAEMAD            IEKFDSSKG+KIST                           
Sbjct: 291  MGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHL 350

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RLGLIRNAK +LEEKGI PS+DRIAE LNMS+KKVRNATEAISKVFSLDR+AFPSLNG
Sbjct: 351  HERLGLIRNAKIRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNG 410

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGET HSYIAD R+EN PWHGVD WALK+EV KL++  L ERE+EII+LYYGLENECLT
Sbjct: 411  LPGETHHSYIADNRLENIPWHGVDAWALKEEVSKLINMMLGEREREIIQLYYGLENECLT 470

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDIS+RIGLSRERVRQVGLVALEKLKHAARKR ++AMLLK
Sbjct: 471  WEDISKRIGLSRERVRQVGLVALEKLKHAARKREMEAMLLK 511



 Score =  129 bits (324), Expect(2) = e-160
 Identities = 80/137 (58%), Positives = 93/137 (67%), Gaps = 7/137 (5%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MMAT AVIGLS+GKRLL+S+FY SD  EKL   +DH    H    S KNV+TA+K SN  
Sbjct: 1    MMATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCS 60

Query: 1564 PTF-LSNRHPQSIKALKEHVDTASNPCS-VEQWPQ-----GEENSDPDYLVDAFLLLQKS 1406
              F  SNR  QSI+ALKEHV TAS P S  +QW Q      EE+SD +Y V+A LLLQKS
Sbjct: 61   SRFPSSNRPQQSIRALKEHVHTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKS 120

Query: 1405 MLEKQWNLSPDTAVITD 1355
            MLEKQWNLS +  V+ D
Sbjct: 121  MLEKQWNLSFEKKVLRD 137


>gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
            gi|641828897|gb|KDO48033.1| hypothetical protein
            CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  462 bits (1190), Expect(2) = e-160
 Identities = 245/341 (71%), Positives = 274/341 (80%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            ++ + +Q +  KQLRS+ISPEL QNRLKGYVKGVVSEELLTH EVV+LSKKIK GL L++
Sbjct: 167  QNKSILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDD 226

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
            HK RLKERLGC+PS EQLA SLRI+R ELQS  +ECSLAREKL MSN+RLVMSIAQRYDN
Sbjct: 227  HKLRLKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDN 286

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
            MGA+MAD            IEKFDSSKG+KIST                           
Sbjct: 287  MGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 346

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RLGLIRNAK +LEEKG+ PSVDRIAE LNMSQKKVRNATEAI KVFSLDREAFPSLNG
Sbjct: 347  HERLGLIRNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNG 406

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGET HSYIAD R+ENNPWHGVD+WALKDEV+KL+  TL ERE+EIIRLYYGL+ ECLT
Sbjct: 407  LPGETHHSYIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLT 466

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDIS+RIGLSRERVRQVGLVALEKLKHAARK++++AML+K
Sbjct: 467  WEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507



 Score =  132 bits (333), Expect(2) = e-160
 Identities = 80/138 (57%), Positives = 95/138 (68%), Gaps = 6/138 (4%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MMAT AVIGLS+GKRLLSS+FY SD  EK +  +D      Q+  S KNV+ AKKSSNY 
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQV-GSTKNVVAAKKSSNYN 59

Query: 1564 PTF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSM 1403
            P+F  SNR  Q IKALKEHVDT +   + E W +      EE+S+ DY V+A LLLQKSM
Sbjct: 60   PSFPSSNRQTQPIKALKEHVDT-NFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSM 118

Query: 1402 LEKQWNLSPDTAVITDMP 1349
            LEKQWNLS +  V+TD P
Sbjct: 119  LEKQWNLSFERTVLTDSP 136


>gb|AKC88633.1| sigma factor [Melianthus villosus]
          Length = 506

 Score =  459 bits (1180), Expect(2) = e-160
 Identities = 238/341 (69%), Positives = 275/341 (80%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            ++S+ +Q S+  +LR++I PEL QNR KGYVKGVVSEELL+H EVV LSKKIK GL LEE
Sbjct: 165  ENSSMMQTSRCNRLRTIIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKKIKCGLSLEE 224

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
            HK RLK+RLGC+PSDEQLATSLRI+RAEL+SK+IE  LAREKL MSN+RLVMSIAQRYDN
Sbjct: 225  HKLRLKKRLGCEPSDEQLATSLRISRAELRSKWIESGLAREKLAMSNVRLVMSIAQRYDN 284

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
            MGAEM+D            IEKFDS+KG+KIST                           
Sbjct: 285  MGAEMSDLVQGGLIGLLRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENSRTLRLPTHL 344

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RLGLIRNAK +LEEKGI PS++R+AECLNMS+KK+RNATEAISKVFSLDREAFPSLNG
Sbjct: 345  HERLGLIRNAKIRLEEKGITPSIERLAECLNMSKKKIRNATEAISKVFSLDREAFPSLNG 404

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGET HSYIAD  ++NNPWHGVDEWALKDEV KL+  TL ERE+EIIRLY+GL+NECLT
Sbjct: 405  LPGETHHSYIADNCLDNNPWHGVDEWALKDEVKKLIEMTLGEREREIIRLYHGLDNECLT 464

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDIS+RIGLSRERVRQVGLVA+EKLKHAAR++ ++AML+K
Sbjct: 465  WEDISKRIGLSRERVRQVGLVAMEKLKHAARRKHMEAMLVK 505



 Score =  136 bits (342), Expect(2) = e-160
 Identities = 79/139 (56%), Positives = 93/139 (66%), Gaps = 6/139 (4%)
 Frame = -1

Query: 1741 MATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYGP 1562
            MAT AVIGLS+GKRLLSS+ Y SD+ EKL+  +DH    H      K V+ AKKSSN  P
Sbjct: 1    MATAAVIGLSAGKRLLSSSLYYSDYAEKLSYANDH---GHYNATPTKTVVIAKKSSNCSP 57

Query: 1561 TF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSML 1400
             F  SNR  QSIKALKEHVD  S P + E W Q      E+N D +Y V+A LLLQKSML
Sbjct: 58   RFPSSNRKTQSIKALKEHVDDISGPSTAESWFQRSNDVDEQNFDIEYSVEALLLLQKSML 117

Query: 1399 EKQWNLSPDTAVITDMPRE 1343
            EKQWNLS D  ++TD+ +E
Sbjct: 118  EKQWNLSFDKTMLTDLVKE 136


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
            gi|462415485|gb|EMJ20222.1| hypothetical protein
            PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  465 bits (1196), Expect(2) = e-160
 Identities = 245/341 (71%), Positives = 273/341 (80%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            KS+  +  S  K LR+++SPEL QN +KGYVKGV+SE+LLTH EVV+LSKKIK GL +EE
Sbjct: 171  KSTCVMHPSTNKPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEE 230

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
            HKSRLKERLGC+PSDEQLATSLRI+RA+LQSK IEC LAREKL MSN+RLVMSIAQRYDN
Sbjct: 231  HKSRLKERLGCEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDN 290

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
            MGAEMAD            IEKFDSSKG+KIST                           
Sbjct: 291  MGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHL 350

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RLGLIRNAK +LEEKGI PS+DRIAE LNMS+KKVRNATEAISKVFSLDR+AFPSLNG
Sbjct: 351  HERLGLIRNAKIRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNG 410

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGET HSYIAD R+EN PWHGVD WALK+EV KL++  L ERE+EII+LYYGLENECLT
Sbjct: 411  LPGETHHSYIADNRLENIPWHGVDAWALKEEVSKLINMMLGEREKEIIQLYYGLENECLT 470

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDIS+RIGLSRERVRQVGLVALEKLKHAARKR ++AMLLK
Sbjct: 471  WEDISKRIGLSRERVRQVGLVALEKLKHAARKREMEAMLLK 511



 Score =  129 bits (325), Expect(2) = e-160
 Identities = 80/137 (58%), Positives = 93/137 (67%), Gaps = 7/137 (5%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MMAT AVIGLS+GKRLL+S+FY SD  EKL   +DH    H    S KNV+TA+K SN  
Sbjct: 1    MMATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCS 60

Query: 1564 PTF-LSNRHPQSIKALKEHVDTASNPCS-VEQWPQ-----GEENSDPDYLVDAFLLLQKS 1406
              F  SNR  QSI+ALKEHV TAS P S  +QW Q      EE+SD +Y V+A LLLQKS
Sbjct: 61   SRFPSSNRPQQSIRALKEHVQTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKS 120

Query: 1405 MLEKQWNLSPDTAVITD 1355
            MLEKQWNLS +  V+ D
Sbjct: 121  MLEKQWNLSFEKKVLRD 137


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  460 bits (1183), Expect(2) = e-159
 Identities = 244/341 (71%), Positives = 272/341 (79%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            ++ +  Q +  KQLRS+ISPEL QN LKGYVKGVVSEELLTH EVV+LSKKIK GL L++
Sbjct: 167  QNKSVPQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDD 226

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
            HK RLKERLGC+PS EQLA SLRI+R ELQS  +ECSLAREKL MSN+RLVMSIAQRYDN
Sbjct: 227  HKLRLKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDN 286

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
            MGA+MAD            IEKFDSSKG+KIST                           
Sbjct: 287  MGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 346

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RLGLIRNAK +LEEKG+ PSVDRIAE LNMSQKKVRNATEAI KVFSLDREAFPSLNG
Sbjct: 347  HERLGLIRNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNG 406

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGET HSYIAD R+ENNPWHGVD+WALKDEV+KL+  TL ERE+EIIRLYYGL+ ECLT
Sbjct: 407  LPGETHHSYIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLT 466

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDIS+RIGLSRERVRQVGLVALEKLKHAARK++++AML+K
Sbjct: 467  WEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507



 Score =  132 bits (333), Expect(2) = e-159
 Identities = 80/138 (57%), Positives = 95/138 (68%), Gaps = 6/138 (4%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MMAT AVIGLS+GKRLLSS+FY SD  EK +  +D      Q+  S KNV+ AKKSSNY 
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQV-GSTKNVVAAKKSSNYN 59

Query: 1564 PTF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSM 1403
            P+F  SNR  Q IKALKEHVDT +   + E W +      EE+S+ DY V+A LLLQKSM
Sbjct: 60   PSFPSSNRQTQPIKALKEHVDT-NFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSM 118

Query: 1402 LEKQWNLSPDTAVITDMP 1349
            LEKQWNLS +  V+TD P
Sbjct: 119  LEKQWNLSFERTVLTDSP 136


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  460 bits (1183), Expect(2) = e-159
 Identities = 243/341 (71%), Positives = 273/341 (80%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            ++ + +Q +  KQLRS+ISPEL QN LKGYVKGVVSEELLTH EVV+LSKKIK GL L++
Sbjct: 167  QNKSVLQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDD 226

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
            HK RLKERLGC+PS EQLA SLRI+R ELQS  +ECSLAREKL MSN+RLVMSIAQRYDN
Sbjct: 227  HKLRLKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDN 286

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
            MGA+MAD            IEKFDSSKG+KIST                           
Sbjct: 287  MGADMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 346

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RLGLIRNAK +LEEKG+ P+VDRIAE LNMSQKKVRNATEAI KVFSLDREAFPSLNG
Sbjct: 347  HERLGLIRNAKLRLEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNG 406

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGET HSYIAD R+ENNPWHGVD+WALKDEV+KL+  TL ERE+EIIRLYYGL+ ECLT
Sbjct: 407  LPGETHHSYIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLT 466

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDIS+RIGLSRERVRQVGLVALEKLKHAARK++++AML+K
Sbjct: 467  WEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507



 Score =  132 bits (333), Expect(2) = e-159
 Identities = 80/138 (57%), Positives = 95/138 (68%), Gaps = 6/138 (4%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MMAT AVIGLS+GKRLLSS+FY SD  EK +  +D      Q+  S KNV+ AKKSSNY 
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQV-GSTKNVVAAKKSSNYN 59

Query: 1564 PTF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQ-----GEENSDPDYLVDAFLLLQKSM 1403
            P+F  SNR  Q IKALKEHVDT +   + E W +      EE+S+ DY V+A LLLQKSM
Sbjct: 60   PSFPSSNRQTQPIKALKEHVDT-NFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSM 118

Query: 1402 LEKQWNLSPDTAVITDMP 1349
            LEKQWNLS +  V+TD P
Sbjct: 119  LEKQWNLSFERTVLTDSP 136


>emb|CDP04910.1| unnamed protein product [Coffea canephora]
          Length = 503

 Score =  470 bits (1209), Expect(2) = e-158
 Identities = 248/342 (72%), Positives = 278/342 (81%), Gaps = 14/342 (4%)
 Frame = -3

Query: 1307 RKSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLE 1128
            RKSS   Q+   + LRS+ISPEL QNRL GYVKGVVSEELLTH EVVQLS+KIK GL  E
Sbjct: 162  RKSSVR-QLRLSRHLRSIISPELLQNRLNGYVKGVVSEELLTHTEVVQLSEKIKQGLCFE 220

Query: 1127 EHKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYD 948
            E K+RL++RLGC+PS+EQLATSL+ITRA+LQSKFIECSLARE+L MSN+RLVMSIAQRYD
Sbjct: 221  EQKARLRKRLGCEPSEEQLATSLKITRADLQSKFIECSLARERLAMSNVRLVMSIAQRYD 280

Query: 947  NMGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX----------- 801
            NMGAEMAD            IEK+DSSKG+KIST                          
Sbjct: 281  NMGAEMADLIQGGLIGLLRGIEKYDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTH 340

Query: 800  ---RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLN 630
               RL LIRNAK +LEEKGI PSVD+IAE LNMSQKKVRNATEA+ KV SLDREAFPSLN
Sbjct: 341  LHERLSLIRNAKIRLEEKGITPSVDKIAESLNMSQKKVRNATEAVCKVISLDREAFPSLN 400

Query: 629  GLPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECL 450
            GLPGETLHSYIAD R+ENNPWHGVD+WALKDEV+KL++STLRERE++IIRLYYGLENECL
Sbjct: 401  GLPGETLHSYIADNRLENNPWHGVDQWALKDEVNKLITSTLRERERDIIRLYYGLENECL 460

Query: 449  TWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            TWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRRL+AM+ +
Sbjct: 461  TWEDISKRIGLSRERVRQVGLVALEKLKYAARKRRLEAMIAR 502



 Score =  118 bits (295), Expect(2) = e-158
 Identities = 68/127 (53%), Positives = 83/127 (65%), Gaps = 4/127 (3%)
 Frame = -1

Query: 1741 MATTAVIGLSSGKRLLSSNFYCSD-FVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MAT AVIGLS GKRLLSS  Y SD F +KL+C  DH LP      S+ +V+ AK+SSN+ 
Sbjct: 1    MATAAVIGLSPGKRLLSSASYYSDLFSDKLSCTCDHFLPV-----SSNSVLAAKRSSNFS 55

Query: 1564 PTFLSNRHPQSIKALKEHVDTASNPCSVEQW---PQGEENSDPDYLVDAFLLLQKSMLEK 1394
            P FLS    Q   ALKEH +TA +  S++ W      EE  DP++ + A LLLQKSMLEK
Sbjct: 56   PKFLSRHKTQPTYALKEHAETAPDLSSIQPWLHVNADEEFLDPEFSMQALLLLQKSMLEK 115

Query: 1393 QWNLSPD 1373
            QWNLS +
Sbjct: 116  QWNLSAE 122


>ref|XP_012492333.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
            [Gossypium raimondii] gi|763777227|gb|KJB44350.1|
            hypothetical protein B456_007G247500 [Gossypium
            raimondii]
          Length = 508

 Score =  459 bits (1180), Expect(2) = e-157
 Identities = 239/330 (72%), Positives = 272/330 (82%), Gaps = 14/330 (4%)
 Frame = -3

Query: 1271 KQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGC 1092
            KQLRS+I PEL QNRLKGYVKGVVSE+LL+H EVV+LS+KIKAGL LEEH+ RLKERLGC
Sbjct: 178  KQLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKERLGC 237

Query: 1091 DPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXX 912
            +PSDEQLATSL+++RAEL+S+ IECSLAREKL MSN+RLVMSIAQRYDNMGAEM+D    
Sbjct: 238  EPSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQG 297

Query: 911  XXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX--------------RLGLIRNAK 774
                    IEKFDSSKGYKIST                             RLGLIRNAK
Sbjct: 298  GLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAK 357

Query: 773  AKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 594
             +LEEKGI P++DRIAE LNMSQKKVRNATEA+SKVFSLDR+AFPSLNGLPGET HSYIA
Sbjct: 358  YRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIA 417

Query: 593  DTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLS 414
            D  +ENNPWHGVDEWALKDEV++L++ TL ERE+EIIRLY+GL+ E LTWEDIS+RIGLS
Sbjct: 418  DNHVENNPWHGVDEWALKDEVNRLINITLGEREREIIRLYHGLDKESLTWEDISKRIGLS 477

Query: 413  RERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            RERVRQVGLVALEKLKHAARK++++AML+K
Sbjct: 478  RERVRQVGLVALEKLKHAARKKKMEAMLVK 507



 Score =  126 bits (317), Expect(2) = e-157
 Identities = 75/138 (54%), Positives = 93/138 (67%), Gaps = 6/138 (4%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MMAT AVIGLS+GKRLLSS+F  S+ V+KL+   D+    +Q  PS K ++ AK+SSN  
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQT-PSTKTLMVAKRSSNCS 59

Query: 1564 PTF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQG-----EENSDPDYLVDAFLLLQKSM 1403
                 SNRH QSIKA KEHVDTAS+  +VE W  G     +E+ D DY V+A LLLQKSM
Sbjct: 60   QNLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSM 119

Query: 1402 LEKQWNLSPDTAVITDMP 1349
            LEKQW LS +  + T+ P
Sbjct: 120  LEKQWTLSFERTMFTESP 137


>ref|XP_009629626.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
            [Nicotiana tomentosiformis]
          Length = 502

 Score =  457 bits (1176), Expect(2) = e-157
 Identities = 244/341 (71%), Positives = 268/341 (78%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            K+S T   S  K+LRSVI PEL QNR KGY+ GVV +ELLTH EVVQLSKKIK GL LEE
Sbjct: 162  KNSATSD-SSSKRLRSVIGPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEE 220

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
             KSRLKERLGC+PSD+QLA SL+I+RA+L+S  IECSLAREKL MSN+RLVMSIAQRYD 
Sbjct: 221  QKSRLKERLGCEPSDDQLAISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDT 280

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
             G EMAD            IEKFD S+G+KIST                           
Sbjct: 281  NGTEMADLIQGGLIGLLRGIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHL 340

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RL LIRNAK KL+E GI PS+++IAECLNMSQKKVRNATEA SKVFSLDREAFPSLNG
Sbjct: 341  HERLSLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNG 400

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGETLHSYIAD R+EN PWHGVDEW LKDEV+ L+SSTLRERE+EI+RLYYGL+NECLT
Sbjct: 401  LPGETLHSYIADNRLENIPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLT 460

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAML+K
Sbjct: 461  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVK 501



 Score =  127 bits (319), Expect(2) = e-157
 Identities = 76/136 (55%), Positives = 89/136 (65%), Gaps = 11/136 (8%)
 Frame = -1

Query: 1729 AVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYGPTFLS 1550
            A+IGLS+G R+LSS+FY SD  EK  C SDH LP H   PS KNVI AK SSNY P+++S
Sbjct: 3    AIIGLSAGNRILSSSFYYSDLTEKF-CVSDHALPCHHF-PSPKNVINAKNSSNYSPSYVS 60

Query: 1549 NRHPQSIKALKEHVDTASNPCS-VEQWPQ----------GEENSDPDYLVDAFLLLQKSM 1403
            NR  QS+KALKEHVD ASN  S  E W Q           EE+S     V+  LLLQKSM
Sbjct: 61   NRKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQNGSCSEEDS-----VEVLLLLQKSM 115

Query: 1402 LEKQWNLSPDTAVITD 1355
            LEKQWNLS + A+  +
Sbjct: 116  LEKQWNLSAEKAMTNE 131


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
            gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
            [Theobroma cacao]
          Length = 508

 Score =  461 bits (1185), Expect(2) = e-156
 Identities = 242/330 (73%), Positives = 272/330 (82%), Gaps = 14/330 (4%)
 Frame = -3

Query: 1271 KQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGC 1092
            KQLRS+ISPEL Q+RLKGYVKGVVS+ELL+H EVV+LSKKIKAGL LEEH+ RLKERLGC
Sbjct: 178  KQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGC 237

Query: 1091 DPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADXXXX 912
            +PSDEQLATSL+I+RAEL+SK IECSLAREKL MSN+RLVMSIAQRYDNMGAEM+D    
Sbjct: 238  EPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQG 297

Query: 911  XXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX--------------RLGLIRNAK 774
                    IEKFDSSKGYKIST                             RLGLIRNAK
Sbjct: 298  GLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAK 357

Query: 773  AKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 594
             +LEEKGI P++DRIAE LNMSQKKVRNATEA+SKVFSLDR+AFPSLNGLPGET HSYIA
Sbjct: 358  IRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIA 417

Query: 593  DTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLTWEDISRRIGLS 414
            D  +EN PWHGVDEWALKDEV++L++ TL ERE+EIIRLYYGL+ E LTWEDIS+RIGLS
Sbjct: 418  DNHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLS 477

Query: 413  RERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            RERVRQVGLVALEKLKHAARK++++AML+K
Sbjct: 478  RERVRQVGLVALEKLKHAARKKKMEAMLVK 507



 Score =  122 bits (307), Expect(2) = e-156
 Identities = 76/138 (55%), Positives = 92/138 (66%), Gaps = 6/138 (4%)
 Frame = -1

Query: 1744 MMATTAVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYG 1565
            MMAT AVIGL++GKRLLSS+F  SD +EKL+  +D+    HQ   S K++I AKKSSN  
Sbjct: 1    MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQT-SSTKSLIVAKKSSNCS 59

Query: 1564 PTF-LSNRHPQSIKALKEHVDTASNPCSVEQWPQGE-----ENSDPDYLVDAFLLLQKSM 1403
             +   SNR  QSIKALKEHVD+AS   + E   QG      E+ D DY V+A LLLQKSM
Sbjct: 60   QSLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSM 119

Query: 1402 LEKQWNLSPDTAVITDMP 1349
            LEKQW LS +  V T+ P
Sbjct: 120  LEKQWTLSFERTVFTESP 137


>ref|XP_009629625.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
            [Nicotiana tomentosiformis]
          Length = 513

 Score =  457 bits (1176), Expect(2) = e-156
 Identities = 244/341 (71%), Positives = 268/341 (78%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1304 KSSTTVQISKGKQLRSVISPELHQNRLKGYVKGVVSEELLTHVEVVQLSKKIKAGLLLEE 1125
            K+S T   S  K+LRSVI PEL QNR KGY+ GVV +ELLTH EVVQLSKKIK GL LEE
Sbjct: 173  KNSATSD-SSSKRLRSVIGPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEE 231

Query: 1124 HKSRLKERLGCDPSDEQLATSLRITRAELQSKFIECSLAREKLTMSNIRLVMSIAQRYDN 945
             KSRLKERLGC+PSD+QLA SL+I+RA+L+S  IECSLAREKL MSN+RLVMSIAQRYD 
Sbjct: 232  QKSRLKERLGCEPSDDQLAISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDT 291

Query: 944  MGAEMADXXXXXXXXXXXXIEKFDSSKGYKISTXXXXXXXXXXXXXXX------------ 801
             G EMAD            IEKFD S+G+KIST                           
Sbjct: 292  NGTEMADLIQGGLIGLLRGIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHL 351

Query: 800  --RLGLIRNAKAKLEEKGIAPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNG 627
              RL LIRNAK KL+E GI PS+++IAECLNMSQKKVRNATEA SKVFSLDREAFPSLNG
Sbjct: 352  HERLSLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNG 411

Query: 626  LPGETLHSYIADTRIENNPWHGVDEWALKDEVDKLLSSTLREREQEIIRLYYGLENECLT 447
            LPGETLHSYIAD R+EN PWHGVDEW LKDEV+ L+SSTLRERE+EI+RLYYGL+NECLT
Sbjct: 412  LPGETLHSYIADNRLENIPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLT 471

Query: 446  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLLK 324
            WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAML+K
Sbjct: 472  WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVK 512



 Score =  125 bits (314), Expect(2) = e-156
 Identities = 76/142 (53%), Positives = 90/142 (63%), Gaps = 17/142 (11%)
 Frame = -1

Query: 1729 AVIGLSSGKRLLSSNFYCSDFVEKLACNSDHVLPQHQILPSAKNVITAKKSSNYGPTFLS 1550
            A+IGLS+G R+LSS+FY SD  EK  C SDH LP H   PS KNVI AK SSNY P+++S
Sbjct: 3    AIIGLSAGNRILSSSFYYSDLTEKF-CVSDHALPCHHF-PSPKNVINAKNSSNYSPSYVS 60

Query: 1549 NRHPQSIKALKEHVDTASNPCS-VEQWPQ----------GEENS------DPDYLVDAFL 1421
            NR  QS+KALKEHVD ASN  S  E W Q           EE+S        +  V+  L
Sbjct: 61   NRKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQNGSCSEEDSVQNGSCSEEDSVEVLL 120

Query: 1420 LLQKSMLEKQWNLSPDTAVITD 1355
            LLQKSMLEKQWNLS + A+  +
Sbjct: 121  LLQKSMLEKQWNLSAEKAMTNE 142