BLASTX nr result
ID: Forsythia21_contig00001167
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00001167
(239 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 53 3e-10
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 53 3e-10
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 53 3e-10
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 54 3e-09
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 49 3e-09
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 55 6e-09
ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434... 49 1e-08
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 52 1e-08
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 45 2e-08
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 50 3e-08
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 52 3e-08
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 52 3e-08
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 52 3e-08
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 51 4e-08
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 50 5e-08
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 50 5e-08
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 51 6e-08
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 51 6e-08
ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235... 47 8e-08
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 52 8e-08
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 52.8 bits (125), Expect(2) = 3e-10
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGMVI-RYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EFDMK+LGSAKKILGM I R R L + Q +Y++K+ +F M AK VS
Sbjct: 1038 EFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVS 1088
Score = 38.5 bits (88), Expect(2) = 3e-10
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKKL 163
YLLLYVDDMLI + KIEI ++KKL
Sbjct: 1010 YLLLYVDDMLIAAKSKIEITKLKKL 1034
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 52.8 bits (125), Expect(2) = 3e-10
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGMVI-RYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EFDMK+LGSAKKILGM I R R L + Q +Y++K+ +F M AK VS
Sbjct: 1040 EFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVS 1090
Score = 38.5 bits (88), Expect(2) = 3e-10
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKKL 163
YLLLYVDDMLI + KIEI ++KKL
Sbjct: 1012 YLLLYVDDMLIAAKSKIEITKLKKL 1036
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 52.8 bits (125), Expect(2) = 3e-10
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGMVI-RYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EFDMK+LGSAKKILGM I R R L + Q +Y++K+ +F M AK VS
Sbjct: 1038 EFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVS 1088
Score = 38.5 bits (88), Expect(2) = 3e-10
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKKL 163
YLLLYVDDMLI + KIEI ++KKL
Sbjct: 1010 YLLLYVDDMLIAAKSKIEITKLKKL 1034
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 53.9 bits (128), Expect(2) = 3e-09
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAKCV 5
EFDMK+LG+AKKILGM + R KL + Q+SY+ K+ +FGMS AK +
Sbjct: 1126 EFDMKDLGAAKKILGMEIYRDHGRKKLFLSQKSYILKVLDRFGMSTAKSI 1175
Score = 33.9 bits (76), Expect(2) = 3e-09
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKKL 163
YLLLYVDDMLI + K ++ ++KKL
Sbjct: 1098 YLLLYVDDMLIAAKKKSDVLKLKKL 1122
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 49.3 bits (116), Expect(2) = 3e-09
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGMVI-RYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EFDMK+LGSAKKIL M I R R L + Q +Y++K+ +F M AK VS
Sbjct: 1038 EFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVS 1088
Score = 38.5 bits (88), Expect(2) = 3e-09
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKKL 163
YLLLYVDDMLI + KIEI ++KKL
Sbjct: 1010 YLLLYVDDMLIAAKSKIEITKLKKL 1034
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 55.1 bits (131), Expect(2) = 6e-09
Identities = 26/48 (54%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAK 11
EF+MK+LG+A+KILGM +IR R KL + Q SY++K+ ++FGMS +K
Sbjct: 1013 EFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSK 1060
Score = 31.6 bits (70), Expect(2) = 6e-09
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKKL 163
YL+LYVDDMLI + K +I ++K L
Sbjct: 985 YLVLYVDDMLIAAKKKYDIQKLKGL 1009
>ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434364 [Malus domestica]
Length = 1100
Score = 48.9 bits (115), Expect(2) = 1e-08
Identities = 26/52 (50%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Frame = -2
Query: 151 EFDMKELGSAKKILGMVI-RYRAENKLTIIQESYLEKIASKFGMSK-AKCVS 2
EF+MK+LG A+KILGM I R RA+ K+++ Q+ YL+K+ +F M++ +K VS
Sbjct: 173 EFEMKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVLQRFRMNENSKLVS 224
Score = 37.0 bits (84), Expect(2) = 1e-08
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIK 169
YLLLYVDDMLIT K+EI R+K
Sbjct: 145 YLLLYVDDMLITCKSKVEIERLK 167
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 52.4 bits (124), Expect(2) = 1e-08
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EF+MK+LG+AKKILGM + R R KL + Q+ Y+EK+ +F M AK VS
Sbjct: 946 EFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAKLVS 996
Score = 33.1 bits (74), Expect(2) = 1e-08
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIK 169
YLLLYVDDMLI + K EI ++K
Sbjct: 918 YLLLYVDDMLIAAKDKSEIAKLK 940
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 45.1 bits (105), Expect(2) = 2e-08
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAKCV 5
EF+MK+LG+AK+ILGM +IR R+ L + Q Y++K+ +F M K V
Sbjct: 1036 EFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLERFEMQDCKPV 1085
Score = 40.0 bits (92), Expect(2) = 2e-08
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKKL 163
YLLLYVDDMLI S YK EI R+K L
Sbjct: 1008 YLLLYVDDMLIASKYKSEIERLKNL 1032
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 49.7 bits (117), Expect(2) = 3e-08
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGMVI-RYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EF+MK+LG AKKILGM I R R LT+ QE Y++K+ F M AK VS
Sbjct: 1038 EFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVS 1088
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKKL 163
YLLLYVDDMLI S K E+ +K+L
Sbjct: 1010 YLLLYVDDMLIASANKSEVNELKQL 1034
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 52.0 bits (123), Expect(2) = 3e-08
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EF+MK+LG+AKKILGM + R R KL + Q+ Y+EK+ +F M AK VS
Sbjct: 1009 EFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVS 1059
Score = 32.3 bits (72), Expect(2) = 3e-08
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIK 169
YLLLYVDDMLI + K EI ++K
Sbjct: 981 YLLLYVDDMLIAAKDKSEIEKLK 1003
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 52.0 bits (123), Expect(2) = 3e-08
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EF+MK+LG+AKKILGM + R R KL + Q+ Y+EK+ +F M AK VS
Sbjct: 916 EFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVS 966
Score = 32.3 bits (72), Expect(2) = 3e-08
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIK 169
YLLLYVDDMLI + K EI ++K
Sbjct: 888 YLLLYVDDMLIAAKDKSEIEKLK 910
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 52.0 bits (123), Expect(2) = 3e-08
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EF+MK+LG+AKKILGM + R R KL + Q+ Y+EK+ +F M AK VS
Sbjct: 779 EFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVS 829
Score = 32.3 bits (72), Expect(2) = 3e-08
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIK 169
YLLLYVDDMLI + K EI ++K
Sbjct: 751 YLLLYVDDMLIAAKDKSEIEKLK 773
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 50.8 bits (120), Expect(2) = 4e-08
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EF+MK+LG+AKKILGM + R R KL + Q+ Y+EK+ +F M AK VS
Sbjct: 1244 EFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVS 1294
Score = 33.1 bits (74), Expect(2) = 4e-08
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIK 169
YLLLYVDDMLI + K EI ++K
Sbjct: 1216 YLLLYVDDMLIAAKDKSEIAKLK 1238
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 50.4 bits (119), Expect(2) = 5e-08
Identities = 25/48 (52%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAK 11
EF+MK+LG+AKKILGM + R R +KL + Q+ Y+EK+ +F M AK
Sbjct: 963 EFEMKDLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRFNMHDAK 1010
Score = 33.1 bits (74), Expect(2) = 5e-08
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIK 169
YLLLYVDDMLI + K EI ++K
Sbjct: 935 YLLLYVDDMLIAAKDKSEIAKLK 957
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 50.4 bits (119), Expect(2) = 5e-08
Identities = 25/48 (52%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAK 11
EF+MK+LG+AKKILGM + R R +KL + Q+ Y+EK+ +F M AK
Sbjct: 795 EFEMKDLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRFNMHDAK 842
Score = 33.1 bits (74), Expect(2) = 5e-08
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIK 169
YLLLYVDDMLI + K EI ++K
Sbjct: 767 YLLLYVDDMLIAAKDKSEIAKLK 789
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 51.2 bits (121), Expect(2) = 6e-08
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EFDMK+LG+AKKILGM + R R L + Q+SY++K+ +F M AK VS
Sbjct: 938 EFDMKDLGAAKKILGMKITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVS 988
Score = 32.0 bits (71), Expect(2) = 6e-08
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKK 166
YLLLYVDDMLI + K +I +KK
Sbjct: 910 YLLLYVDDMLIAAKSKEQITTLKK 933
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 51.2 bits (121), Expect(2) = 6e-08
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGM-VIRYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EFDMK+LG+AKKILGM + R R L + Q+SY++K+ +F M AK VS
Sbjct: 1027 EFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVS 1077
Score = 32.0 bits (71), Expect(2) = 6e-08
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKK 166
YLLLYVDDMLI + K +I +KK
Sbjct: 999 YLLLYVDDMLIAAKSKEQITTLKK 1022
>ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235647 [Nicotiana
sylvestris]
Length = 985
Score = 47.4 bits (111), Expect(2) = 8e-08
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = -2
Query: 151 EFDMKELGSAKKILGMVIRYRAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EFDMK+LG+AKKILGM I R ++ + + Q+ Y+E++ +F M K VS
Sbjct: 374 EFDMKDLGAAKKILGMEIS-REDDVVHLSQKRYIERVLERFNMQTCKPVS 422
Score = 35.4 bits (80), Expect(2) = 8e-08
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIKKL 163
YLLLYVDDMLI +N EI +KKL
Sbjct: 346 YLLLYVDDMLIAANNITEINALKKL 370
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 52.4 bits (124), Expect(2) = 8e-08
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 EFDMKELGSAKKILGMVIRY-RAENKLTIIQESYLEKIASKFGMSKAKCVS 2
EFDMKELG+AKKILGM IR R KL + Q+ Y++++ +F M+ K VS
Sbjct: 387 EFDMKELGAAKKILGMEIRRDRQAGKLFLSQQKYIKRVLDRFNMNNCKPVS 437
Score = 30.4 bits (67), Expect(2) = 8e-08
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -3
Query: 237 YLLLYVDDMLITSNYKIEIGRIK 169
YLLLYVDDMLI S K I ++K
Sbjct: 359 YLLLYVDDMLIASRDKSLIKKLK 381