BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00028197
         (263 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004231526.1 PREDICTED: pentatricopeptide repeat-containing pr...    74   1e-13
XP_015066779.1 PREDICTED: pentatricopeptide repeat-containing pr...    74   2e-13
XP_010910591.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide...    73   3e-13
XP_010276630.1 PREDICTED: pentatricopeptide repeat-containing pr...    73   4e-13
XP_006350361.2 PREDICTED: pentatricopeptide repeat-containing pr...    73   4e-13
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ...    72   1e-12
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...    72   1e-12
4OZS_A Chain A, Rna Binding Protein                                    69   2e-12
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...    71   2e-12
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...    71   2e-12
XP_014492073.1 PREDICTED: pentatricopeptide repeat-containing pr...    71   2e-12
XP_014492072.1 PREDICTED: pentatricopeptide repeat-containing pr...    71   2e-12
XP_011458318.1 PREDICTED: pentatricopeptide repeat-containing pr...    70   3e-12
XP_016648052.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide...    70   3e-12
XP_016198456.1 PREDICTED: pentatricopeptide repeat-containing pr...    70   4e-12
XP_007226363.1 hypothetical protein PRUPE_ppa022421mg [Prunus pe...    70   5e-12
ONI36392.1 hypothetical protein PRUPE_1G583300 [Prunus persica]        70   5e-12
XP_006359690.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   7e-12
XP_017419327.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   7e-12
XP_017419323.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   7e-12

>XP_004231526.1 PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           isoform X1 [Solanum lycopersicum] XP_010315590.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140 isoform X1 [Solanum lycopersicum]
           XP_010315591.1 PREDICTED: pentatricopeptide
           repeat-containing protein At2g17140 isoform X1 [Solanum
           lycopersicum] XP_019067676.1 PREDICTED:
           pentatricopeptide repeat-containing protein At2g17140
           isoform X1 [Solanum lycopersicum]
          Length = 837

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 38/77 (49%), Positives = 50/77 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +LLD MK  NV   I+ Y+ LV  F R GDV E  R +Q M D GL+PD  T ++ +S L
Sbjct: 184 KLLDTMKMMNVCPNIIIYNTLVASFCRKGDVDEAERLVQRMRDDGLLPDVVTFNSRISAL 243

Query: 186 CKAGKIAEASRHFKELQ 236
           C +GKI EASR F+++Q
Sbjct: 244 CNSGKILEASRIFRDMQ 260


>XP_015066779.1 PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Solanum pennellii] XP_015066780.1 PREDICTED:
           pentatricopeptide repeat-containing protein At2g17140
           [Solanum pennellii] XP_015066781.1 PREDICTED:
           pentatricopeptide repeat-containing protein At2g17140
           [Solanum pennellii] XP_015066782.1 PREDICTED:
           pentatricopeptide repeat-containing protein At2g17140
           [Solanum pennellii]
          Length = 837

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 36/77 (46%), Positives = 50/77 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +LLD MK  NV   ++ Y+ L+  F R GDV E  R +Q M D GL+PD  T ++ +S L
Sbjct: 184 KLLDTMKMMNVCPNVIIYNTLIASFCRKGDVDEAERLVQRMRDDGLLPDVVTFNSRISAL 243

Query: 186 CKAGKIAEASRHFKELQ 236
           C +GKI EASR F+++Q
Sbjct: 244 CNSGKILEASRIFRDMQ 260



 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 24/79 (30%), Positives = 43/79 (54%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           +L +M +  V  TI +Y+ L+ G  + G + +    + LM++ G+ PD  T STL+   C
Sbjct: 329 VLKEMPQNGVDPTIYSYNILIHGLCKHGMLGDAKMLMSLMINDGIFPDTVTYSTLLHGYC 388

Query: 189 KAGKIAEASRHFKELQEKG 245
              K+ EA    +E+ ++G
Sbjct: 389 TKSKVTEAKNILREMMKRG 407


>XP_010910591.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61990, mitochondrial-like [Elaeis
           guineensis]
          Length = 792

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 34/69 (49%), Positives = 49/69 (71%)
 Frame = +3

Query: 45  TILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELCKAGKIAEASRHF 224
           T+LT++ L++GF +LG +QE  R LQ+MVD  ++PDN T +TL+    KAGKI EA + F
Sbjct: 655 TVLTFNTLIDGFCKLGKLQEATRLLQVMVDQQILPDNVTYTTLIDGHTKAGKIKEACQLF 714

Query: 225 KELQEKGWM 251
            E+QE+  M
Sbjct: 715 SEMQERNLM 723



 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 30/80 (37%), Positives = 50/80 (62%)
 Frame = +3

Query: 18  KMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELCKAG 197
           +M  R +K   + Y+ L++G+ +  DV +V   L  M++SG++PD  T S ++  L K+G
Sbjct: 437 EMLGRGLKPNDVIYTNLIDGYCKGNDVAKVFSTLHSMLESGVLPDVQTYSVVIHSLSKSG 496

Query: 198 KIAEASRHFKELQEKGWMAD 257
           K+ +A + F ELQEKG + D
Sbjct: 497 KMEDAFQIFSELQEKGLVPD 516



 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 28/78 (35%), Positives = 44/78 (56%)
 Frame = +3

Query: 12  LDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELCK 191
           LDKM ERNV      Y+ L+ G  + G ++E  R    M++ GL+P+  T   L+   CK
Sbjct: 365 LDKMTERNVSPDAFCYNSLIIGLCKTGKMEEALRYFVEMLERGLLPNTYTYGALIHGYCK 424

Query: 192 AGKIAEASRHFKELQEKG 245
           +G + EA  +F+E+  +G
Sbjct: 425 SGDMHEAENYFQEMLGRG 442



 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 28/84 (33%), Positives = 47/84 (55%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +LL +M     K  I++Y+ LV+GF R G++ E       MV +G+ P+  T + L+  +
Sbjct: 188 QLLGEMSLLGQKPDIISYTSLVDGFMREGNIDEAFTVRDEMVANGVQPNVVTYNNLIRGV 247

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CK GK+ +A    +E+ + GW  D
Sbjct: 248 CKMGKMDKAHELLREMIQMGWKPD 271



 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 27/79 (34%), Positives = 43/79 (54%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL +M  R +K   + Y+ ++ G  R G + E    L  M +  + PD    ++L+  LC
Sbjct: 329 LLKEMFARGLKPNAVIYAAVISGHCREGRIIEACETLDKMTERNVSPDAFCYNSLIIGLC 388

Query: 189 KAGKIAEASRHFKELQEKG 245
           K GK+ EA R+F E+ E+G
Sbjct: 389 KTGKMEEALRYFVEMLERG 407


>XP_010276630.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110
           [Nelumbo nucifera] XP_010276631.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Nelumbo nucifera] XP_010276632.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Nelumbo nucifera] XP_010276633.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Nelumbo nucifera]
          Length = 736

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 34/79 (43%), Positives = 54/79 (68%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           L +KM ERNVK  I+TY+ L++GF R GDV++ N+    M+   ++P++ + S L++ELC
Sbjct: 511 LFEKMIERNVKPDIVTYNTLIDGFCREGDVEKANKLWDDMISREILPNHISYSILINELC 570

Query: 189 KAGKIAEASRHFKELQEKG 245
             GK++EA R + E+  KG
Sbjct: 571 SRGKVSEAFRLWDEMVNKG 589



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 25/80 (31%), Positives = 45/80 (56%)
 Frame = +3

Query: 18  KMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELCKAG 197
           +MK   +    + Y+ L+ GF R GD+ +  +    MV+ G +PD  T +T+++ LCK  
Sbjct: 409 QMKGAGLVPDSVIYTMLIGGFCRNGDISDALKMRDEMVEQGCLPDVVTYNTILNGLCKEK 468

Query: 198 KIAEASRHFKELQEKGWMAD 257
           ++++A   F E+ E+G   D
Sbjct: 469 RLSDADELFNEMVERGIFPD 488



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 25/84 (29%), Positives = 49/84 (58%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL+ M+ R +   ++TY+ L+ GF   G +QE N+  + M++ G+ PD  T ++L++   
Sbjct: 651 LLNNMENRGIIPDVVTYNVLLNGFCGEGRMQEANKIFRKMIERGIEPDRYTYTSLINGHV 710

Query: 189 KAGKIAEASRHFKELQEKGWMADN 260
               + EA R   E+ ++G++ D+
Sbjct: 711 AQDNLKEAFRLHDEMLQRGFVPDD 734


>XP_006350361.2 PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Solanum tuberosum]
          Length = 836

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 34/77 (44%), Positives = 51/77 (66%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +LLD MK  NV+  ++ Y+ L+  F R GDV E  R ++ M + GL+PD  T ++ +S L
Sbjct: 183 KLLDTMKMMNVRPNVIIYNTLIASFCRKGDVDEAERLVERMREDGLLPDVVTFNSRISAL 242

Query: 186 CKAGKIAEASRHFKELQ 236
           C +GKI EASR F+++Q
Sbjct: 243 CNSGKILEASRIFRDMQ 259



 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 23/79 (29%), Positives = 44/79 (55%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           +L ++ +  V  TI +Y+ L++G  + G + +    + LM++ G+ PD  T STL+   C
Sbjct: 328 VLKELPQNGVDPTIYSYNILIDGLCKNGMLGDAKMLMSLMINDGIFPDTVTYSTLLHGYC 387

Query: 189 KAGKIAEASRHFKELQEKG 245
              K+ EA    +E+ ++G
Sbjct: 388 TKSKVTEAKNILREMMKRG 406


>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
          Length = 460

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 32/84 (38%), Positives = 55/84 (65%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K +++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 247 KLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 306

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 307 CKAGKLDEALKLFEEMVEKGIKPD 330



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 72  KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 131

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 132 CKAGKLDEALKLFEEMVEKGIKPD 155



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 107 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 166

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 167 CKAGKLDEALKLFEEMVEKGIKPD 190



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 282 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 341

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 342 CKAGKLDEALKLFEEMVEKGIKPD 365



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 317 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 376

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 377 CKAGKLDEALKLFEEMVEKGIKPD 400



 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 31/80 (38%), Positives = 53/80 (66%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 142 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 201

Query: 186 CKAGKIAEASRHFKELQEKG 245
           CKAGK+ EA + F+E+ EKG
Sbjct: 202 CKAGKLDEALKLFEEMVEKG 221



 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 31/84 (36%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K +++TY+ L++G  + G + E  +  + MV+ G+ P   T +TL+  L
Sbjct: 212 KLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGL 271

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 272 CKAGKLDEALKLFEEMVEKGIKPD 295



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 30/80 (37%), Positives = 52/80 (65%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ P   T +TL+  L
Sbjct: 177 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGL 236

Query: 186 CKAGKIAEASRHFKELQEKG 245
           CKAGK+ EA + F+E+ EKG
Sbjct: 237 CKAGKLDEALKLFEEMVEKG 256



 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 31/83 (37%), Positives = 52/83 (62%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           L  +++ + V  T++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  LC
Sbjct: 38  LFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 97

Query: 189 KAGKIAEASRHFKELQEKGWMAD 257
           KAGK+ EA + F+E+ EKG   D
Sbjct: 98  KAGKLDEALKLFEEMVEKGIKPD 120



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/78 (29%), Positives = 43/78 (55%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T   +V   
Sbjct: 352 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESY 411

Query: 186 CKAGKIAEASRHFKELQE 239
           C+A +  EA     E+ E
Sbjct: 412 CRAKRFEEARGFLSEVSE 429


>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
          Length = 460

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 32/80 (40%), Positives = 53/80 (66%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T STL+  L
Sbjct: 142 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGL 201

Query: 186 CKAGKIAEASRHFKELQEKG 245
           CKAGK+ EA + F+E+ EKG
Sbjct: 202 CKAGKLDEALKLFEEMVEKG 221



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 247 KLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 306

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 307 CKAGKLDEALKLFEEMVEKGIKPD 330



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 72  KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 131

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 132 CKAGKLDEALKLFEEMVEKGIKPD 155



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 107 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 166

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 167 CKAGKLDEALKLFEEMVEKGIKPD 190



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/80 (40%), Positives = 53/80 (66%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TYS L++G  + G + E  +  + MV+ G+ P+  T STL+  L
Sbjct: 177 KLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGL 236

Query: 186 CKAGKIAEASRHFKELQEKG 245
           CKAGK+ EA + F+E+ EKG
Sbjct: 237 CKAGKLDEALKLFEEMVEKG 256



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 282 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 341

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 342 CKAGKLDEALKLFEEMVEKGIKPD 365



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 317 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 376

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 377 CKAGKLDEALKLFEEMVEKGIKPD 400



 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TYS L++G  + G + E  +  + MV+ G+ P+  T +TL+  L
Sbjct: 212 KLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGL 271

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 272 CKAGKLDEALKLFEEMVEKGIKPD 295



 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 31/83 (37%), Positives = 52/83 (62%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           L  +++ + V  T++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  LC
Sbjct: 38  LFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 97

Query: 189 KAGKIAEASRHFKELQEKGWMAD 257
           KAGK+ EA + F+E+ EKG   D
Sbjct: 98  KAGKLDEALKLFEEMVEKGIKPD 120



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/78 (29%), Positives = 43/78 (55%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T   +V   
Sbjct: 352 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESY 411

Query: 186 CKAGKIAEASRHFKELQE 239
           C+A +  EA     E+ E
Sbjct: 412 CRAKRFEEARGFLSEVSE 429


>4OZS_A Chain A, Rna Binding Protein
          Length = 175

 Score = 68.6 bits (166), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 55/84 (65%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L  +MKE+ VK  ++TY+ L++G ++ G ++E  +  Q M + G+ PD  T +TL+  L
Sbjct: 23  QLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGL 82

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
            KAG++ EA + F+E++EKG   D
Sbjct: 83  AKAGRLEEALQLFQEMKEKGVKPD 106



 Score = 68.6 bits (166), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 55/84 (65%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L  +MKE+ VK  ++TY+ L++G ++ G ++E  +  Q M + G+ PD  T +TL+  L
Sbjct: 58  QLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGL 117

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
            KAG++ EA + F+E++EKG   D
Sbjct: 118 AKAGRLEEALQLFQEMKEKGVKPD 141



 Score = 68.2 bits (165), Expect = 2e-12
 Identities = 31/80 (38%), Positives = 54/80 (67%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L  +MKE+ VK  ++TY+ L++G ++ G ++E  +  Q M + G+ PD  T +TL+  L
Sbjct: 93  QLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGL 152

Query: 186 CKAGKIAEASRHFKELQEKG 245
            KAG++ EA + F+E++EKG
Sbjct: 153 AKAGRLEEALQLFQEMKEKG 172



 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 26/70 (37%), Positives = 46/70 (65%)
 Frame = +3

Query: 48  ILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELCKAGKIAEASRHFK 227
           ++TY+ L++G ++ G ++E  +  Q M + G+ PD  T +TL+  L KAG++ EA + F+
Sbjct: 2   VVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQ 61

Query: 228 ELQEKGWMAD 257
           E++EKG   D
Sbjct: 62  EMKEKGVKPD 71


>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
          Length = 460

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 72  KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 131

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 132 CKAGKLDEALKLFEEMVEKGIKPD 155



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 107 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 166

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 167 CKAGKLDEALKLFEEMVEKGIKPD 190



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 142 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGL 201

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 202 CKAGKLDEALKLFEEMVEKGIKPD 225



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 177 KLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGL 236

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 237 CKAGKLDEALKLFEEMVEKGIKPD 260



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 212 KLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 271

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 272 CKAGKLDEALKLFEEMVEKGIKPD 295



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 247 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 306

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 307 CKAGKLDEALKLFEEMVEKGIKPD 330



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 282 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 341

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 342 CKAGKLDEALKLFEEMVEKGIKPD 365



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 317 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 376

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 377 CKAGKLDEALKLFEEMVEKGIKPD 400



 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 31/83 (37%), Positives = 52/83 (62%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           L  +++ + V  T++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  LC
Sbjct: 38  LFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 97

Query: 189 KAGKIAEASRHFKELQEKGWMAD 257
           KAGK+ EA + F+E+ EKG   D
Sbjct: 98  KAGKLDEALKLFEEMVEKGIKPD 120



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/78 (29%), Positives = 43/78 (55%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T   +V   
Sbjct: 352 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESY 411

Query: 186 CKAGKIAEASRHFKELQE 239
           C+A +  EA     E+ E
Sbjct: 412 CRAKRFEEARGFLSEVSE 429


>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U10 In Complex With Its Target Rna U10
          Length = 460

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 72  KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 131

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 132 CKAGKLDEALKLFEEMVEKGIKPD 155



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 107 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 166

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 167 CKAGKLDEALKLFEEMVEKGIKPD 190



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 142 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 201

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 202 CKAGKLDEALKLFEEMVEKGIKPD 225



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 177 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 236

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 237 CKAGKLDEALKLFEEMVEKGIKPD 260



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 212 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 271

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 272 CKAGKLDEALKLFEEMVEKGIKPD 295



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 247 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 306

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 307 CKAGKLDEALKLFEEMVEKGIKPD 330



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 282 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 341

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 342 CKAGKLDEALKLFEEMVEKGIKPD 365



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  L
Sbjct: 317 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 376

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           CKAGK+ EA + F+E+ EKG   D
Sbjct: 377 CKAGKLDEALKLFEEMVEKGIKPD 400



 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 31/83 (37%), Positives = 52/83 (62%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           L  +++ + V  T++TY+ L++G  + G + E  +  + MV+ G+ PD  T +TL+  LC
Sbjct: 38  LFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 97

Query: 189 KAGKIAEASRHFKELQEKGWMAD 257
           KAGK+ EA + F+E+ EKG   D
Sbjct: 98  KAGKLDEALKLFEEMVEKGIKPD 120



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/78 (29%), Positives = 43/78 (55%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L ++M E+ +K  ++TY+ L++G  + G + E  +  + MV+ G+ PD  T   +V   
Sbjct: 352 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESY 411

Query: 186 CKAGKIAEASRHFKELQE 239
           C+A +  EA     E+ E
Sbjct: 412 CRAKRFEEARGFLSEVSE 429


>XP_014492073.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like isoform X2 [Vigna radiata var. radiata]
          Length = 792

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 37/83 (44%), Positives = 51/83 (61%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL+KM ERN+  T++TY+ L+ G  R G++    R L L+ ++GLVPD  T S LV  LC
Sbjct: 316 LLNKMFERNLSPTLVTYNSLIHGQCRAGNLDSAFRLLNLVKENGLVPDQWTYSILVDTLC 375

Query: 189 KAGKIAEASRHFKELQEKGWMAD 257
           K G++ EA   F   QEK   A+
Sbjct: 376 KRGRVEEACELFNSSQEKDLKAN 398



 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 27/84 (32%), Positives = 47/84 (55%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           L+D+M + N+K T+ TY+ L+    + GD+   N+ L  M+ SG  PD    +T V   C
Sbjct: 456 LVDEMIKMNLKPTVETYTNLIVEMLKEGDINHANKTLNQMISSGCQPDVFAYTTFVHAYC 515

Query: 189 KAGKIAEASRHFKELQEKGWMADN 260
             G++ EA     +++E+G + D+
Sbjct: 516 SQGRLEEAENVMAKMKEEGIVPDS 539


>XP_014492072.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like isoform X1 [Vigna radiata var. radiata]
          Length = 897

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 37/83 (44%), Positives = 51/83 (61%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL+KM ERN+  T++TY+ L+ G  R G++    R L L+ ++GLVPD  T S LV  LC
Sbjct: 421 LLNKMFERNLSPTLVTYNSLIHGQCRAGNLDSAFRLLNLVKENGLVPDQWTYSILVDTLC 480

Query: 189 KAGKIAEASRHFKELQEKGWMAD 257
           K G++ EA   F   QEK   A+
Sbjct: 481 KRGRVEEACELFNSSQEKDLKAN 503



 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 27/84 (32%), Positives = 47/84 (55%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           L+D+M + N+K T+ TY+ L+    + GD+   N+ L  M+ SG  PD    +T V   C
Sbjct: 561 LVDEMIKMNLKPTVETYTNLIVEMLKEGDINHANKTLNQMISSGCQPDVFAYTTFVHAYC 620

Query: 189 KAGKIAEASRHFKELQEKGWMADN 260
             G++ EA     +++E+G + D+
Sbjct: 621 SQGRLEEAENVMAKMKEEGIVPDS 644


>XP_011458318.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Fragaria vesca subsp. vesca]
           XP_011458319.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g65560-like [Fragaria vesca
           subsp. vesca] XP_011458320.1 PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like [Fragaria vesca subsp. vesca]
          Length = 891

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 35/83 (42%), Positives = 50/83 (60%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LLDKM  RN+   ++T++ L+ G  + G +    R L LM  SGLVPD  T + L+  LC
Sbjct: 421 LLDKMLARNLSPDLITFTSLIHGQCQAGHLDSAYRLLHLMNHSGLVPDQCTYTVLIDALC 480

Query: 189 KAGKIAEASRHFKELQEKGWMAD 257
           K G++ EA   F+ L+EKG  +D
Sbjct: 481 KRGRLEEAQALFESLKEKGIKSD 503


>XP_016648052.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g65560-like [Prunus mume]
          Length = 896

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 34/79 (43%), Positives = 50/79 (63%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL+KM +R +  +++TY+ L+ G  ++G +    R + LM DSGLVPD  T S L+  LC
Sbjct: 421 LLNKMLDRKLSPSLVTYNSLIHGQCKIGHLDSAYRLVNLMKDSGLVPDQWTYSVLIDTLC 480

Query: 189 KAGKIAEASRHFKELQEKG 245
           K G++ EA   F  L+EKG
Sbjct: 481 KRGRLEEAHALFDSLKEKG 499



 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 28/84 (33%), Positives = 45/84 (53%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           L++KM    VK T+ TY+ L++   + GD    +R    MV SG  PD  T +T +   C
Sbjct: 561 LVEKMLSIGVKPTVSTYTILIKQMLKEGDFDHAHRLFDQMVCSGNQPDLFTYTTFIHAYC 620

Query: 189 KAGKIAEASRHFKELQEKGWMADN 260
             G + EA +   ++ E+G +AD+
Sbjct: 621 GIGNVEEAEKLMIKMNEEGIIADS 644


>XP_016198456.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Arachis ipaensis] XP_016198457.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Arachis ipaensis] XP_016198458.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Arachis ipaensis] XP_016198459.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Arachis ipaensis]
          Length = 906

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 35/83 (42%), Positives = 51/83 (61%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL+KM ERN+  TI+TY+ L+ G  + G +    R L L+ ++GLVPD  T S  +  LC
Sbjct: 431 LLNKMIERNLSPTIVTYNSLIYGQCKAGHLDSAYRLLNLIKENGLVPDQWTYSIFIDTLC 490

Query: 189 KAGKIAEASRHFKELQEKGWMAD 257
           K G++ EA + FK  +EK   A+
Sbjct: 491 KQGRVEEAHKFFKSFKEKDLKAN 513


>XP_007226363.1 hypothetical protein PRUPE_ppa022421mg [Prunus persica]
          Length = 845

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 34/79 (43%), Positives = 50/79 (63%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL+KM +R +  +++TY+ L+ G  ++G +    R + LM DSGLVPD  T S L+  LC
Sbjct: 414 LLNKMLDRKLLPSLVTYNSLIHGQCKIGHLDSAYRLVNLMKDSGLVPDQWTYSVLIDTLC 473

Query: 189 KAGKIAEASRHFKELQEKG 245
           K G++ EA   F  L+EKG
Sbjct: 474 KRGRLEEAHALFDSLKEKG 492


>ONI36392.1 hypothetical protein PRUPE_1G583300 [Prunus persica]
          Length = 915

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 34/79 (43%), Positives = 50/79 (63%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL+KM +R +  +++TY+ L+ G  ++G +    R + LM DSGLVPD  T S L+  LC
Sbjct: 440 LLNKMLDRKLLPSLVTYNSLIHGQCKIGHLDSAYRLVNLMKDSGLVPDQWTYSVLIDTLC 499

Query: 189 KAGKIAEASRHFKELQEKG 245
           K G++ EA   F  L+EKG
Sbjct: 500 KRGRLEEAHALFDSLKEKG 518


>XP_006359690.1 PREDICTED: pentatricopeptide repeat-containing protein At2g16880
           [Solanum tuberosum]
          Length = 770

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 32/84 (38%), Positives = 51/84 (60%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL++M ++ +K   +TY+ L++G+ + G + +    LQ M +SGL PD  + +TL+S  C
Sbjct: 369 LLEEMNQKGIKCNEITYNTLIKGYCKEGKMDKAREVLQKMEESGLCPDCVSYNTLISAYC 428

Query: 189 KAGKIAEASRHFKELQEKGWMADN 260
           KAG + E  R  K + EKG   DN
Sbjct: 429 KAGNLPEVLRIMKRIGEKGLKMDN 452



 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 26/84 (30%), Positives = 47/84 (55%)
 Frame = +3

Query: 6   RLLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSEL 185
           +L D+M+ER V  TI+TY+ ++ G  + G  Q+    L  +++ G+VPD  T +T++   
Sbjct: 508 KLWDEMEEREVIPTIVTYNIIIGGLCKSGKTQQAIAKLNELLEKGIVPDEITYNTIIHGY 567

Query: 186 CKAGKIAEASRHFKELQEKGWMAD 257
           C  G I +A +   ++ E  +  D
Sbjct: 568 CWEGNIEKAFQFHNKMVENSFKPD 591


>XP_017419327.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like isoform X2 [Vigna angularis]
          Length = 788

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 35/83 (42%), Positives = 51/83 (61%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL+KM ERN+  T++TY+ L+ G  R+G +    + L L+ ++GLVPD  T S L+  LC
Sbjct: 316 LLNKMFERNLSPTLVTYNSLIHGQCRVGHLDSAFKLLNLVKENGLVPDQWTYSILIDTLC 375

Query: 189 KAGKIAEASRHFKELQEKGWMAD 257
           K G++ EA   F   QEK   A+
Sbjct: 376 KRGRVEEACELFNSSQEKDLKAN 398



 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 27/84 (32%), Positives = 47/84 (55%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           L+D+M + N+K T+ TY+ L+    + GD+   N+ L  M+ SG  PD    +T V   C
Sbjct: 456 LVDEMIKVNLKPTVETYTNLIAEMLKEGDINHANKTLNQMISSGCQPDVFAYTTFVHAYC 515

Query: 189 KAGKIAEASRHFKELQEKGWMADN 260
             G++ EA     +++E+G + D+
Sbjct: 516 SQGRLEEAENVMTKMKEEGIVPDS 539


>XP_017419323.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like isoform X1 [Vigna angularis]
           XP_017419324.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g65560-like isoform X1
           [Vigna angularis] XP_017419325.1 PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like isoform X1 [Vigna angularis] KOM37996.1
           hypothetical protein LR48_Vigan03g137800 [Vigna
           angularis] BAT84450.1 hypothetical protein
           VIGAN_04182900 [Vigna angularis var. angularis]
          Length = 893

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 35/83 (42%), Positives = 51/83 (61%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           LL+KM ERN+  T++TY+ L+ G  R+G +    + L L+ ++GLVPD  T S L+  LC
Sbjct: 421 LLNKMFERNLSPTLVTYNSLIHGQCRVGHLDSAFKLLNLVKENGLVPDQWTYSILIDTLC 480

Query: 189 KAGKIAEASRHFKELQEKGWMAD 257
           K G++ EA   F   QEK   A+
Sbjct: 481 KRGRVEEACELFNSSQEKDLKAN 503



 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 27/84 (32%), Positives = 47/84 (55%)
 Frame = +3

Query: 9   LLDKMKERNVKVTILTYSRLVEGFSRLGDVQEVNRALQLMVDSGLVPDNATSSTLVSELC 188
           L+D+M + N+K T+ TY+ L+    + GD+   N+ L  M+ SG  PD    +T V   C
Sbjct: 561 LVDEMIKVNLKPTVETYTNLIAEMLKEGDINHANKTLNQMISSGCQPDVFAYTTFVHAYC 620

Query: 189 KAGKIAEASRHFKELQEKGWMADN 260
             G++ EA     +++E+G + D+
Sbjct: 621 SQGRLEEAENVMTKMKEEGIVPDS 644