BLASTX nr result
ID: Ephedra29_contig00028165
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00028165
(293 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAP02066.1 CRR2 [Arabidopsis thaliana] 100 2e-22
NP_190263.1 Tetratricopeptide repeat (TPR)-like superfamily prot... 100 2e-22
XP_010426124.1 PREDICTED: pentatricopeptide repeat-containing pr... 97 3e-21
XP_010270723.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 4e-21
XP_009150502.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 5e-21
CDX83006.1 BnaA01g20060D [Brassica napus] 96 5e-21
XP_013711883.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 5e-21
JAU77452.1 Pentatricopeptide repeat-containing protein, chloropl... 96 7e-21
JAU25189.1 Pentatricopeptide repeat-containing protein, chloropl... 96 7e-21
XP_018472358.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 7e-21
XP_002877513.1 hypothetical protein ARALYDRAFT_905886 [Arabidops... 96 7e-21
XP_013671988.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 7e-21
XP_013603219.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 7e-21
XP_012064759.1 PREDICTED: pentatricopeptide repeat-containing pr... 95 9e-21
AKH05207.1 chlororespiratory reduction 2 [Geranium maderense] 95 9e-21
XP_014506168.1 PREDICTED: pentatricopeptide repeat-containing pr... 95 9e-21
EEF41913.1 pentatricopeptide repeat-containing protein, putative... 94 9e-21
XP_006418855.1 hypothetical protein EUTSA_v10002433mg [Eutrema s... 95 1e-20
XP_015575520.1 PREDICTED: pentatricopeptide repeat-containing pr... 94 2e-20
XP_017983917.1 PREDICTED: pentatricopeptide repeat-containing pr... 94 2e-20
>OAP02066.1 CRR2 [Arabidopsis thaliana]
Length = 657
Score = 100 bits (248), Expect = 2e-22
Identities = 51/95 (53%), Positives = 66/95 (69%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+LVDMY++ VDYA VFG M VRN VSW+AMI Y NG EAL+ F EM+R+ K+
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRG 315
Score = 63.5 bits (153), Expect = 1e-09
Identities = 32/87 (36%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C K++ VF M R+ VSWN++I Y +GY ++A+++F EM+ + +
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS 383
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 384 PTP--VTFVSVLGACSHEGLVEEGKRL 408
>NP_190263.1 Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana] Q9STF3.1 RecName:
Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
CAB51186.1 putative protein [Arabidopsis thaliana]
BAE98921.1 hypothetical protein [Arabidopsis thaliana]
AEE78205.1 Tetratricopeptide repeat (TPR)-like
superfamily protein [Arabidopsis thaliana]
Length = 657
Score = 100 bits (248), Expect = 2e-22
Identities = 51/95 (53%), Positives = 66/95 (69%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+LVDMY++ VDYA VFG M VRN VSW+AMI Y NG EAL+ F EM+R+ K+
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRG 315
Score = 63.5 bits (153), Expect = 1e-09
Identities = 32/87 (36%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C K++ VF M R+ VSWN++I Y +GY ++A+++F EM+ + +
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS 383
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 384 PTP--VTFVSVLGACSHEGLVEEGKRL 408
>XP_010426124.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Camelina sativa]
Length = 658
Score = 96.7 bits (239), Expect = 3e-21
Identities = 49/95 (51%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+LVDMY++ VDYA VFG M V+N VSW+AMI Y NG EAL+ F EM+ + K+
Sbjct: 222 TTLVDMYARFGCVDYASYVFGEMPVKNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 281
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 282 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 316
Score = 62.8 bits (151), Expect = 2e-09
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C K++ VF M R+ VSWN++I Y +GY +A+++F EM+ +
Sbjct: 325 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGAT 384
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 385 PTP--VTFVSVLGACSHEGLVEEGKRL 409
>XP_010270723.1 PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Nelumbo nucifera] XP_010270724.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g16610
[Nelumbo nucifera] XP_010270725.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g16610
[Nelumbo nucifera] XP_010270726.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g16610
[Nelumbo nucifera] XP_010270728.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g16610
[Nelumbo nucifera]
Length = 848
Score = 96.3 bits (238), Expect = 4e-21
Identities = 47/96 (48%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEM-IRDEK 179
T+++DMY+KC+++DYA +F +M VR V+W+AMIGGYV G EALKMF +M ++DE
Sbjct: 312 TAVLDMYAKCEQLDYARRIFNTMGVRTEVTWSAMIGGYVSCGCMGEALKMFDQMLLKDEM 371
Query: 180 NPCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
+P P TL +V+ ACA + ++ RG +IH Y ++SG
Sbjct: 372 DPTP--ATLGIVLRACAKLTDIDRGRQIHGYTIKSG 405
Score = 68.9 bits (167), Expect = 1e-11
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+LVD+YSKC ++ A +F M R+ V+WNAMI G +G Y++ + +F+EM + N
Sbjct: 211 TALVDLYSKCGCLNEAQIIFDKMPKRDVVAWNAMIAGSALHGLYKDTIGLFLEMQKAGTN 270
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLR 281
P T+V V+ L +G +HCY +R
Sbjct: 271 --PNTSTIVAVLPTVGQAKVLNQGKSMHCYCVR 301
Score = 68.6 bits (166), Expect = 2e-11
Identities = 35/86 (40%), Positives = 54/86 (62%)
Frame = +3
Query: 6 SLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKNP 185
+L+DMYSKC ++D A +VF + ++ VSWNAMI GY NG EAL++F ++ +
Sbjct: 516 ALIDMYSKCGRIDVAREVFDRIPKQDIVSWNAMIAGYGINGLGMEALRLFHDL--QKVGI 573
Query: 186 CPTNVTLVLVISACASIGELQRGMEI 263
P +VT V ++SAC+ G + G +
Sbjct: 574 KPDDVTFVCILSACSHSGLITEGKHL 599
Score = 56.2 bits (134), Expect = 4e-07
Identities = 33/94 (35%), Positives = 52/94 (55%)
Frame = +3
Query: 6 SLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKNP 185
SL+ MY+K +D A +F M+ ++ VS+ A+I G NG +EAL +F +M
Sbjct: 415 SLLSMYAKSGLIDDAISLFNKMEAKDTVSYGAIISGCGQNGNAKEALFIFHKM--QVSGA 472
Query: 186 CPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P T++ V+ ACA + L++G H YL+ G
Sbjct: 473 HPDLATMLGVLPACAHLAALKQGRSGHGYLIVHG 506
Score = 52.8 bits (125), Expect = 7e-06
Identities = 29/93 (31%), Positives = 49/93 (52%)
Frame = +3
Query: 9 LVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKNPC 188
L +Y +C +V+ A +VF + N V WN+MI Y +G ++ A+ ++ EM +
Sbjct: 112 LTRLYVECGEVELARNVFDRIPNPNVVLWNSMIRAYSWDGLFDRAVDLYYEMC--DMGVE 169
Query: 189 PTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P T V+ AC+ + L+ G +IH + R G
Sbjct: 170 PNKFTFPFVLKACSVLKALEDGKKIHDHAKRIG 202
>XP_009150502.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Brassica rapa]
Length = 655
Score = 95.9 bits (237), Expect = 5e-21
Identities = 48/95 (50%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+DMY++ VDYA +VF M VRN VSW+AMI Y NG EAL+ F EM+ + K+
Sbjct: 219 TTLLDMYARFGCVDYASNVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 278
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 279 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 313
Score = 63.5 bits (153), Expect = 1e-09
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C +++ VF M+ R+ VSWN++I Y +GY +A+++F EM+ + +
Sbjct: 322 SALVTMYGRCGRLEVGQRVFDRMRERDVVSWNSLISSYGVHGYGRKAIEIFEEMLANGAS 381
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 382 PTP--VTFVSVLGACSHEGLVEEGKRL 406
>CDX83006.1 BnaA01g20060D [Brassica napus]
Length = 655
Score = 95.9 bits (237), Expect = 5e-21
Identities = 48/95 (50%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+DMY++ VDYA +VF M VRN VSW+AMI Y NG EAL+ F EM+ + K+
Sbjct: 219 TTLLDMYARFGCVDYASNVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 278
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 279 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 313
Score = 62.4 bits (150), Expect = 3e-09
Identities = 30/87 (34%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C +++ VF M+ R+ VSWN++I Y +GY +A+++F +M+ + +
Sbjct: 322 SALVTMYGRCGRLEVGQRVFDRMRERDVVSWNSLISSYGVHGYGRKAIEIFEQMLANGAS 381
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 382 PTP--VTFVSVLGACSHEGLVEEGKRL 406
>XP_013711883.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brassica napus] XP_013711884.1
PREDICTED: pentatricopeptide repeat-containing protein
At3g46790, chloroplastic-like [Brassica napus]
Length = 656
Score = 95.9 bits (237), Expect = 5e-21
Identities = 48/95 (50%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+DMY++ VDYA +VF M VRN VSW+AMI Y NG EAL+ F EM+ + K+
Sbjct: 220 TTLLDMYARFGCVDYASNVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 279
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 280 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 314
Score = 62.4 bits (150), Expect = 3e-09
Identities = 30/87 (34%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C +++ VF M+ R+ VSWN++I Y +GY +A+++F +M+ + +
Sbjct: 323 SALVTMYGRCGRLEVGQRVFDRMRERDVVSWNSLISSYGVHGYGRKAIEIFEQMLANGAS 382
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 383 PTP--VTFVSVLGACSHEGLVEEGKRL 407
Score = 55.8 bits (133), Expect = 6e-07
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIR---D 173
T L+ MYS VDYA VF + R WNA+ G+ EE L ++ +M R +
Sbjct: 114 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 173
Query: 174 EKNPCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
T V V S C ++ L +G EIH +L R G
Sbjct: 174 SDRFTYTYVLKACVTSECTAVDHLAKGKEIHAHLTRRG 211
>JAU77452.1 Pentatricopeptide repeat-containing protein, chloroplastic [Noccaea
caerulescens]
Length = 654
Score = 95.5 bits (236), Expect = 7e-21
Identities = 48/95 (50%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+DMY++ VDYA +VF M VRN VSW+AMI Y NG EAL+ F EM+ + K+
Sbjct: 218 TTLLDMYARFGCVDYASNVFDGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 277
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 278 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 312
Score = 63.5 bits (153), Expect = 1e-09
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C +++ VF M+ R+ VSWN++I Y +GY +A+++F EM+ + +
Sbjct: 321 SALVTMYGRCGRLEVGQRVFDRMRERDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGAS 380
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 381 PTP--VTFVSVLGACSHEGLVEEGKRL 405
>JAU25189.1 Pentatricopeptide repeat-containing protein, chloroplastic [Noccaea
caerulescens] JAU35595.1 Pentatricopeptide
repeat-containing protein, chloroplastic [Noccaea
caerulescens]
Length = 654
Score = 95.5 bits (236), Expect = 7e-21
Identities = 48/95 (50%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+DMY++ VDYA +VF M VRN VSW+AMI Y NG EAL+ F EM+ + K+
Sbjct: 218 TTLLDMYARFGCVDYASNVFDGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 277
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 278 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 312
Score = 63.5 bits (153), Expect = 1e-09
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C +++ VF M+ R+ VSWN++I Y +GY +A+++F EM+ + +
Sbjct: 321 SALVTMYGRCGRLEVGQRVFDRMRERDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGAS 380
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 381 PTP--VTFVSVLGACSHEGLVEEGKRL 405
>XP_018472358.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Raphanus sativus]
Length = 656
Score = 95.5 bits (236), Expect = 7e-21
Identities = 48/95 (50%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+DMY++ VDYA +VF M VRN VSW+AMI Y NG EAL+ F EM+ + K+
Sbjct: 220 TTLLDMYARFGCVDYASNVFDGMPVRNVVSWSAMIACYAKNGKAFEALRTFSEMMTETKD 279
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 280 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 314
Score = 63.5 bits (153), Expect = 1e-09
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C +++ VF M+ R+ VSWN++I Y +GY +A+++F EM+ + +
Sbjct: 323 SALVTMYGRCGRLEVGQRVFDRMRERDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGAS 382
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 383 PTP--VTFVSVLGACSHEGLVEEGKRL 407
>XP_002877513.1 hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata] EFH53772.1 hypothetical protein
ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
Length = 657
Score = 95.5 bits (236), Expect = 7e-21
Identities = 49/95 (51%), Positives = 64/95 (67%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+LVDMY++ VDYA VF M VRN VSW+AMI Y NG EAL+ F EM+ + K+
Sbjct: 221 TTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 280
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 315
Score = 64.7 bits (156), Expect = 4e-10
Identities = 33/87 (37%), Positives = 53/87 (60%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C K+D VF M R+ VSWN++I Y +GY +A+++F EM+ + +
Sbjct: 324 SALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGAS 383
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 384 PTP--VTFVSVLGACSHEGLVEEGKRL 408
>XP_013671988.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Brassica napus] XP_013671989.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Brassica napus]
Length = 658
Score = 95.5 bits (236), Expect = 7e-21
Identities = 48/95 (50%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+DMY++ VDYA +VF M VRN VSW+AMI Y NG EALK F EM+ + ++
Sbjct: 222 TTLLDMYARFGCVDYASNVFNGMPVRNVVSWSAMIACYAKNGKAFEALKTFREMMTETED 281
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 282 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 316
Score = 63.5 bits (153), Expect = 1e-09
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C +++ VF M+ R+ VSWN++I Y +GY +A+++F EM+ + +
Sbjct: 325 SALVTMYGRCGRLEVGQRVFDRMRERDVVSWNSLISSYGVHGYGRKAIEIFEEMLANGAS 384
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 385 PTP--VTFVSVLGACSHEGLVEEGKRL 409
>XP_013603219.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Brassica oleracea var. oleracea]
Length = 658
Score = 95.5 bits (236), Expect = 7e-21
Identities = 48/95 (50%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+DMY++ VDYA +VF M VRN VSW+AMI Y NG EALK F EM+ + ++
Sbjct: 222 TTLLDMYARFGCVDYASNVFNGMPVRNVVSWSAMIACYAKNGKAFEALKTFREMMTETED 281
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 282 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 316
Score = 63.5 bits (153), Expect = 1e-09
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C +++ VF M+ R+ VSWN++I Y +GY +A+++F EM+ + +
Sbjct: 325 SALVTMYGRCGRLEVGQRVFDRMRERDVVSWNSLISSYGVHGYGRKAIEIFEEMLANGAS 384
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 385 PTP--VTFVSVLGACSHEGLVEEGKRL 409
>XP_012064759.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Jatropha curcas] KDP44009.1 hypothetical
protein JCGZ_05476 [Jatropha curcas]
Length = 652
Score = 95.1 bits (235), Expect = 9e-21
Identities = 46/95 (48%), Positives = 64/95 (67%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+DMY++ YA VF M V+N VSW+AMI Y NG EAL++F EMI + K+
Sbjct: 216 TTLIDMYARFGCASYASSVFSEMPVKNVVSWSAMIACYAKNGKPFEALELFREMILETKD 275
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
CP +VT+V V+ ACA++ L++G IH Y+LR G
Sbjct: 276 LCPNSVTMVSVLQACAALAALEQGRPIHGYILRRG 310
Score = 60.8 bits (146), Expect = 1e-08
Identities = 29/87 (33%), Positives = 54/87 (62%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY++C K++ VF M R+ VSWN++I Y +G+ ++A+++F EM +K
Sbjct: 319 SALVTMYARCGKLELGQKVFDQMDKRDVVSWNSLISSYGVHGFGKKAIQIFEEM--TDKG 376
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P+ ++ V V+ AC+ G ++ G +
Sbjct: 377 VLPSPISFVSVLGACSHAGLVEEGKSL 403
>AKH05207.1 chlororespiratory reduction 2 [Geranium maderense]
Length = 653
Score = 95.1 bits (235), Expect = 9e-21
Identities = 47/95 (49%), Positives = 63/95 (66%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+LVDMY+K +V YA VF M VRN VSW+AMI Y NGY EAL++F EM+ E
Sbjct: 217 TTLVDMYAKFGRVAYADFVFDEMPVRNVVSWSAMIACYAKNGYPFEALELFWEMMLGENE 276
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ AC ++ L++G +H Y+LR G
Sbjct: 277 SFPNSVTMVSVLQACGALAALEQGKLVHAYILRKG 311
Score = 61.2 bits (147), Expect = 7e-09
Identities = 30/83 (36%), Positives = 51/83 (61%)
Frame = +3
Query: 6 SLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKNP 185
SLV MY +C K++ VF MK R+ V+WN++I Y +G+ +A+++F +MI +P
Sbjct: 321 SLVAMYGRCGKLEQGQRVFDQMKERDVVAWNSLISMYGIHGFGSKAIRVFEDMIDSGVSP 380
Query: 186 CPTNVTLVLVISACASIGELQRG 254
P ++ V V+ AC+ G ++ G
Sbjct: 381 SP--ISFVSVLGACSHAGHVEEG 401
>XP_014506168.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vigna radiata var. radiata]
Length = 848
Score = 95.1 bits (235), Expect = 9e-21
Identities = 46/95 (48%), Positives = 66/95 (69%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
TS+VDMYSKC + A +VFG M+ RN ++W AM+ G NGY E+ALK+F +M ++EK
Sbjct: 413 TSIVDMYSKCGAIKLATNVFGRMEKRNVITWTAMLVGLSQNGYAEDALKLFCQM-QEEKV 471
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VTLV ++ CA +G L++G +H YL+R G
Sbjct: 472 PA-NSVTLVSLVHCCAHLGSLKKGRSVHAYLIRHG 505
Score = 71.6 bits (174), Expect = 2e-12
Identities = 36/95 (37%), Positives = 56/95 (58%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
+S+V+ + KC +D A VF M ++ V WN++IGGYV G+++EA+K+F+ MI
Sbjct: 211 SSIVNFFVKCGYLDDARKVFDGMPEKDIVCWNSIIGGYVQEGFFKEAIKLFLAMIGGGLR 270
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P P VT+V ++ AC G + G H L+ G
Sbjct: 271 PSP--VTMVSLLKACGESGLKKLGTSAHAVLIALG 303
Score = 68.2 bits (165), Expect = 3e-11
Identities = 37/95 (38%), Positives = 52/95 (54%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
TSLVDMYS D A VF M R+ +SWNAMI GY+ NG E+ +F +I+
Sbjct: 312 TSLVDMYSNLGDTDNAALVFNGMFNRSLISWNAMISGYIQNGLIPESFALFRRLIQSGSG 371
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
+ TLV +I C+ +L+ G +H ++R G
Sbjct: 372 --FDSGTLVSLIRGCSQTSDLENGRLLHACIIRKG 404
>EEF41913.1 pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 414
Score = 94.4 bits (233), Expect = 9e-21
Identities = 46/95 (48%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+LVDMY++ V YA VF M V+N VSW+AMI Y NG EAL++F EM+ + K+
Sbjct: 215 TTLVDMYARFGYVSYASCVFSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETKD 274
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
CP +VT+V V+ ACA++ L++G +H Y+LR G
Sbjct: 275 MCPNSVTMVSVLQACAALAALEQGKLLHGYILRRG 309
Score = 62.4 bits (150), Expect = 3e-09
Identities = 31/84 (36%), Positives = 53/84 (63%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
+SLV MY++C K+ A VF M R+ VSWN++I Y +G+ ++A+++F +M R+
Sbjct: 318 SSLVTMYARCGKLQLAQHVFDQMDKRDVVSWNSLISSYGVHGFGKKAIQIFKDMTRNGVF 377
Query: 183 PCPTNVTLVLVISACASIGELQRG 254
P P ++ V V+ AC+ G ++ G
Sbjct: 378 PSP--ISFVSVLGACSHAGLVEEG 399
>XP_006418855.1 hypothetical protein EUTSA_v10002433mg [Eutrema salsugineum]
ESQ37291.1 hypothetical protein EUTSA_v10002433mg
[Eutrema salsugineum]
Length = 659
Score = 94.7 bits (234), Expect = 1e-20
Identities = 48/95 (50%), Positives = 64/95 (67%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+DMY++ VDYA VF M VRN VSW+AMI Y NG EAL+ F EM+ + K+
Sbjct: 223 TTLLDMYARFGCVDYASHVFDEMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 282
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P +VT+V V+ ACAS+ L++G IH Y+LR G
Sbjct: 283 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 317
Score = 62.4 bits (150), Expect = 3e-09
Identities = 31/87 (35%), Positives = 53/87 (60%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
++LV MY +C +++ VF M R+ VSWN++I Y +GY +A+++F EM+ + +
Sbjct: 326 SALVTMYGRCGRLEVGQRVFDRMHERDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGAS 385
Query: 183 PCPTNVTLVLVISACASIGELQRGMEI 263
P P VT V V+ AC+ G ++ G +
Sbjct: 386 PTP--VTFVSVLGACSHEGLVEEGKRL 410
>XP_015575520.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Ricinus communis]
Length = 651
Score = 94.4 bits (233), Expect = 2e-20
Identities = 46/95 (48%), Positives = 65/95 (68%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+LVDMY++ V YA VF M V+N VSW+AMI Y NG EAL++F EM+ + K+
Sbjct: 215 TTLVDMYARFGYVSYASCVFSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETKD 274
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
CP +VT+V V+ ACA++ L++G +H Y+LR G
Sbjct: 275 MCPNSVTMVSVLQACAALAALEQGKLLHGYILRRG 309
Score = 62.4 bits (150), Expect = 3e-09
Identities = 31/84 (36%), Positives = 53/84 (63%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
+SLV MY++C K+ A VF M R+ VSWN++I Y +G+ ++A+++F +M R+
Sbjct: 318 SSLVTMYARCGKLQLAQHVFDQMDKRDVVSWNSLISSYGVHGFGKKAIQIFKDMTRNGVF 377
Query: 183 PCPTNVTLVLVISACASIGELQRG 254
P P ++ V V+ AC+ G ++ G
Sbjct: 378 PSP--ISFVSVLGACSHAGLVEEG 399
>XP_017983917.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
chloroplastic [Theobroma cacao]
Length = 736
Score = 94.4 bits (233), Expect = 2e-20
Identities = 44/90 (48%), Positives = 62/90 (68%)
Frame = +3
Query: 6 SLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKNP 185
+L+DMYSKC +D AFD+F ++ R+ +SWN MIGGY H YY+EAL +F M+R N
Sbjct: 302 ALIDMYSKCGDLDTAFDLFEGLQQRDVISWNVMIGGYTHMSYYKEALGLFRRMLR--SNI 359
Query: 186 CPTNVTLVLVISACASIGELQRGMEIHCYL 275
P++VT + V+ ACA++G L G IH Y+
Sbjct: 360 EPSDVTFLSVLPACANLGALDLGKWIHAYI 389
Score = 68.6 bits (166), Expect = 2e-11
Identities = 35/86 (40%), Positives = 52/86 (60%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
TSL+DMY+KC ++ A VF M+ +N SWNAMI G +G ++AL++F +M+
Sbjct: 403 TSLIDMYAKCGSIEAAQQVFNGMEQKNLASWNAMISGLAMHGLADKALELFSQMMGGGLK 462
Query: 183 PCPTNVTLVLVISACASIGELQRGME 260
P ++T V V+SAC G L G +
Sbjct: 463 --PDDITFVGVLSACTHAGLLDLGRQ 486
Score = 67.8 bits (164), Expect = 4e-11
Identities = 38/95 (40%), Positives = 52/95 (54%)
Frame = +3
Query: 3 TSLVDMYSKCKKVDYAFDVFGSMKVRNPVSWNAMIGGYVHNGYYEEALKMFMEMIRDEKN 182
T+L+ Y ++ A +F + +R+ VSWNAMI GY G +EEAL F EMI N
Sbjct: 200 TALITGYVSIGYMENARKLFDEIPIRDVVSWNAMIAGYAQTGQHEEALAFFEEMI--GAN 257
Query: 183 PCPTNVTLVLVISACASIGELQRGMEIHCYLLRSG 287
P TLV V+SACA G L+ G + ++ G
Sbjct: 258 VVPNESTLVSVLSACAQSGSLELGTWVRSWINEHG 292