BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00028162
         (276 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016445801.1 PREDICTED: pentatricopeptide repeat-containing pr...    99   2e-22
XP_009610843.1 PREDICTED: pentatricopeptide repeat-containing pr...    99   2e-22
GAV63323.1 PPR domain-containing protein/PPR_1 domain-containing...    99   3e-22
XP_009349726.1 PREDICTED: pentatricopeptide repeat-containing pr...    99   4e-22
XP_008376543.2 PREDICTED: pentatricopeptide repeat-containing pr...    98   5e-22
ABR16520.1 unknown [Picea sitchensis]                                  98   6e-22
XP_019230651.1 PREDICTED: pentatricopeptide repeat-containing pr...    97   2e-21
XP_009778148.1 PREDICTED: pentatricopeptide repeat-containing pr...    97   2e-21
CAN66059.1 hypothetical protein VITISV_017037 [Vitis vinifera]         96   3e-21
CBI30347.3 unnamed protein product, partial [Vitis vinifera]           96   4e-21
XP_002275884.1 PREDICTED: putative pentatricopeptide repeat-cont...    96   4e-21
XP_010679297.1 PREDICTED: pentatricopeptide repeat-containing pr...    96   4e-21
XP_009343217.2 PREDICTED: putative pentatricopeptide repeat-cont...    96   4e-21
XP_009343520.2 PREDICTED: pentatricopeptide repeat-containing pr...    96   5e-21
KZM98033.1 hypothetical protein DCAR_014605 [Daucus carota subsp...    94   9e-21
XP_010662353.1 PREDICTED: pentatricopeptide repeat-containing pr...    95   9e-21
GAV61852.1 PPR domain-containing protein/PPR_2 domain-containing...    95   9e-21
JAU66709.1 Pentatricopeptide repeat-containing protein, mitochon...    89   1e-20
XP_016464289.1 PREDICTED: pentatricopeptide repeat-containing pr...    94   1e-20
XP_017243979.1 PREDICTED: pentatricopeptide repeat-containing pr...    94   2e-20

>XP_016445801.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Nicotiana tabacum]
          Length = 519

 Score = 99.4 bits (246), Expect = 2e-22
 Identities = 47/89 (52%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCG-YIDSARKLLDRIKHPDVVSWTTMIAG 185
           E G   HG +VK G++ +VF  N LMD YAKCG  +DSARK+ D +   DVVSW TMI G
Sbjct: 27  EAGQVVHGHIVKLGFESSVFAKNTLMDFYAKCGGNLDSARKVFDEMPDRDVVSWNTMIGG 86

Query: 186 YAQHGQLDNALELFRMIPEKSVFTWNAII 272
           Y  HG  + AL LF  +PE++V TWN++I
Sbjct: 87  YMIHGDQERALCLFEAMPERNVVTWNSVI 115



 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 25/66 (37%), Positives = 41/66 (62%)
 Frame = +3

Query: 75  NVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDNALELFRMIPEKSVF 254
           N ++    K   I++A  + D++    V+SWT M++GYA  G L +A ++F  IP K+V 
Sbjct: 143 NTMISGCVKLSDIEAAIAVFDKMPEKSVISWTAMVSGYATIGDLQSARKMFDRIPAKNVV 202

Query: 255 TWNAII 272
           +WNA+I
Sbjct: 203 SWNALI 208



 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
 Frame = +3

Query: 15  GLQFHGKLVKCGYQGNVF-----VSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMI 179
           G   HGK +    + N F     + N L+D +AKCG +++A+ +  R+    +++WTTMI
Sbjct: 251 GSHEHGKWIDSFIRKNKFDLSVPLGNALIDTFAKCGDMENAKAVFLRMAQRCIITWTTMI 310

Query: 180 AGYAQHGQLDNALELF 227
           +G A +G   +ALEL+
Sbjct: 311 SGLAVNGHCRDALELY 326


>XP_009610843.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Nicotiana tomentosiformis]
          Length = 608

 Score = 99.4 bits (246), Expect = 2e-22
 Identities = 47/89 (52%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCG-YIDSARKLLDRIKHPDVVSWTTMIAG 185
           E G   HG +VK G++ +VF  N LMD YAKCG  +DSARK+ D +   DVVSW TMI G
Sbjct: 116 EAGQVVHGHIVKLGFESSVFAKNTLMDFYAKCGGNLDSARKVFDEMPDRDVVSWNTMIGG 175

Query: 186 YAQHGQLDNALELFRMIPEKSVFTWNAII 272
           Y  HG  + AL LF  +PE++V TWN++I
Sbjct: 176 YMIHGDQERALCLFEAMPERNVVTWNSVI 204



 Score = 55.5 bits (132), Expect = 6e-07
 Identities = 25/66 (37%), Positives = 40/66 (60%)
 Frame = +3

Query: 75  NVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDNALELFRMIPEKSVF 254
           N ++    K   I++A  + D +    V+SWT M++GYA  G L +A ++F  IP K+V 
Sbjct: 232 NTMISGCVKLSDIEAAIAVFDEMPEKSVISWTAMVSGYATIGDLQSARKMFDRIPAKNVV 291

Query: 255 TWNAII 272
           +WNA+I
Sbjct: 292 SWNALI 297



 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
 Frame = +3

Query: 15  GLQFHGKLVKCGYQGNVF-----VSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMI 179
           G   HGK +    + N F     + N L+D +AKCG +++A+ +  R+    +++WTTMI
Sbjct: 340 GSHEHGKWIDSFIRKNKFDLSVPLGNALIDTFAKCGDMENAKAVFLRMAQRCIITWTTMI 399

Query: 180 AGYAQHGQLDNALELF 227
           +G A +G   +ALEL+
Sbjct: 400 SGLAVNGHCRDALELY 415


>GAV63323.1 PPR domain-containing protein/PPR_1 domain-containing protein/PPR_2
           domain-containing protein [Cephalotus follicularis]
          Length = 689

 Score = 99.0 bits (245), Expect = 3e-22
 Identities = 46/91 (50%), Positives = 63/91 (69%)
 Frame = +3

Query: 3   DFEQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIA 182
           D + G +FH  + + G   NV ++NVLMD+Y KCG +D+ARK+ D ++   +VSWTTM+ 
Sbjct: 272 DLKLGREFHLYITESGVNLNVSLANVLMDMYMKCGDVDAARKMFDSMEMKTIVSWTTMVV 331

Query: 183 GYAQHGQLDNALELFRMIPEKSVFTWNAIIG 275
           GYA+ G LD A +LF  +PEK V  WNAIIG
Sbjct: 332 GYAKCGLLDTARKLFEDMPEKDVVPWNAIIG 362


>XP_009349726.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Pyrus x bretschneideri]
          Length = 544

 Score = 98.6 bits (244), Expect = 4e-22
 Identities = 44/86 (51%), Positives = 59/86 (68%)
 Frame = +3

Query: 15  GLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQ 194
           G   HG+ VK G   +VFV N LM +Y+ CG++ SARKL D     DVVSW +MI GY +
Sbjct: 139 GRSIHGQAVKYGLDSDVFVQNSLMSMYSACGFLSSARKLFDETPGRDVVSWNSMIKGYLK 198

Query: 195 HGQLDNALELFRMIPEKSVFTWNAII 272
            G LD AL+LFR + ++S+FTWN++I
Sbjct: 199 SGSLDEALKLFRKMKKRSIFTWNSVI 224



 Score = 57.8 bits (138), Expect = 9e-08
 Identities = 26/81 (32%), Positives = 43/81 (53%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           + G+  HG L + G   +V +   L+D+Y KCG +D A ++   +   D ++WT MI+  
Sbjct: 272 DHGIWVHGYLRRSGLDSDVVIGTALVDMYGKCGCVDKAYEVFQEMPKKDTLAWTAMISVM 331

Query: 189 AQHGQLDNALELFRMIPEKSV 251
           A HG  + A  LF+ +    V
Sbjct: 332 ALHGFGNEAFGLFKQMETTGV 352


>XP_008376543.2 PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Malus domestica]
          Length = 544

 Score = 98.2 bits (243), Expect = 5e-22
 Identities = 44/90 (48%), Positives = 60/90 (66%)
 Frame = +3

Query: 3   DFEQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIA 182
           D   G   HG+ VK G   +VFV N LM +Y++CG+  SARKL D     DVVSW +MI 
Sbjct: 135 DGSAGRSIHGQAVKYGLDSDVFVQNSLMSMYSECGFFSSARKLFDETPGRDVVSWNSMIK 194

Query: 183 GYAQHGQLDNALELFRMIPEKSVFTWNAII 272
           GY + G LD AL+LFR + ++++FTWN++I
Sbjct: 195 GYLKSGSLDEALKLFRKMKKRNIFTWNSVI 224



 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 26/81 (32%), Positives = 44/81 (54%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           + G+  HG L + G   +V +   L+D+Y KCG++D A ++   +   D ++WT MI+  
Sbjct: 272 DHGIWVHGYLRRSGLDSDVVIGTALVDMYGKCGFVDKAYEVFQEMPKKDTLAWTAMISVM 331

Query: 189 AQHGQLDNALELFRMIPEKSV 251
           A HG  + A  LF+ +    V
Sbjct: 332 ALHGLGNEAFGLFKQMETAGV 352


>ABR16520.1 unknown [Picea sitchensis]
          Length = 644

 Score = 98.2 bits (243), Expect = 6e-22
 Identities = 45/90 (50%), Positives = 66/90 (73%)
 Frame = +3

Query: 3   DFEQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIA 182
           D E   +FH ++VK G++ NVFV N L+D+YAK G I+ AR+L D++   DVVSW  MIA
Sbjct: 178 DLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIA 237

Query: 183 GYAQHGQLDNALELFRMIPEKSVFTWNAII 272
           GY Q+G +++AL+LF+ IP++ V TWN ++
Sbjct: 238 GYVQNGLIEDALKLFQEIPKRDVITWNTMM 267



 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 30/71 (42%), Positives = 52/71 (73%)
 Frame = +3

Query: 60  NVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDNALELFRMIP 239
           +V   N +M  YA+CG +++A +L +++   ++VSW TMIAGY Q+G +  A +LF+++P
Sbjct: 259 DVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMP 318

Query: 240 EKSVFTWNAII 272
           E++V +WNA+I
Sbjct: 319 ERNVISWNAVI 329



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 33/76 (43%), Positives = 49/76 (64%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           EQG + H  +++ G+Q +V V N L+ +YAKCG I+ ARK+ DR++  D  S + MI GY
Sbjct: 405 EQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGY 464

Query: 189 AQHGQLDNALELFRMI 236
           A +G    +LELF  +
Sbjct: 465 AINGCSKESLELFEQM 480



 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 27/71 (38%), Positives = 47/71 (66%)
 Frame = +3

Query: 60  NVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDNALELFRMIP 239
           N+   N ++  Y + G +  A KL   +   +V+SW  +I+G+AQ+GQ++ AL+LF+ +P
Sbjct: 290 NLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMP 349

Query: 240 EKSVFTWNAII 272
           E +V +WNA+I
Sbjct: 350 ECNVVSWNAMI 360



 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 27/65 (41%), Positives = 41/65 (63%)
 Frame = +3

Query: 33  KLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDN 212
           KL +   + NV   N ++  +A+ G ++ A KL   +   +VVSW  MIAGY+Q+GQ +N
Sbjct: 312 KLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAEN 371

Query: 213 ALELF 227
           AL+LF
Sbjct: 372 ALKLF 376


>XP_019230651.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Nicotiana attenuata] OIT29277.1
           pentatricopeptide repeat-containing protein,
           chloroplastic [Nicotiana attenuata]
          Length = 519

 Score = 96.7 bits (239), Expect = 2e-21
 Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCG-YIDSARKLLDRIKHPDVVSWTTMIAG 185
           E G   HG +VK G++ +VF  N LMD YAKCG  + SARK+ D +   DVVSW TMI G
Sbjct: 27  EAGQVVHGHIVKLGFESSVFAKNTLMDFYAKCGGNLGSARKVFDEMPDRDVVSWNTMIGG 86

Query: 186 YAQHGQLDNALELFRMIPEKSVFTWNAII 272
           Y  HG  + AL LF  +PE++V TWN++I
Sbjct: 87  YMIHGDQERALCLFEAMPERNVVTWNSVI 115



 Score = 58.5 bits (140), Expect = 5e-08
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = +3

Query: 75  NVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDNALELFRMIPEKSVF 254
           N ++    K   I++AR + D +    V+SWT M++GYA  G L +A ++F  IP K+V 
Sbjct: 143 NTMISGCVKLSDIEAARAVFDEMPEKSVISWTAMVSGYATIGDLQSARKMFDRIPAKNVV 202

Query: 255 TWNAII 272
           +WNA+I
Sbjct: 203 SWNALI 208



 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
 Frame = +3

Query: 15  GLQFHGKLVKCGYQGNVF-----VSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMI 179
           G   HGK +    + N F     + N L+D +AKCG +++A+ +  R+    +++WTTMI
Sbjct: 251 GSHEHGKWIDSFIRKNKFDVSVPLGNALIDTFAKCGDMENAKAVFLRMAQRCIITWTTMI 310

Query: 180 AGYAQHGQLDNALELF 227
           +G A +G   +ALEL+
Sbjct: 311 SGLAVNGHCRDALELY 326


>XP_009778148.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Nicotiana sylvestris]
          Length = 608

 Score = 96.7 bits (239), Expect = 2e-21
 Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCG-YIDSARKLLDRIKHPDVVSWTTMIAG 185
           E G   HG +VK G++ +VF  N LMD YAKCG  + SARK+ D +   DVVSW TMI G
Sbjct: 116 EAGQVMHGHIVKLGFESSVFAKNTLMDFYAKCGGNLGSARKVFDEMLDRDVVSWNTMIGG 175

Query: 186 YAQHGQLDNALELFRMIPEKSVFTWNAII 272
           Y  HG  + AL LF  +PE++V TWN++I
Sbjct: 176 YMIHGDQERALCLFEAMPERNVVTWNSVI 204



 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = +3

Query: 75  NVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDNALELFRMIPEKSVF 254
           N ++    K   I++AR + D +    V+SWT M++GYA  G L +A ++F  IPEK+V 
Sbjct: 232 NTMISGCVKLSNIEAARAVFDEMPEKSVISWTAMVSGYATIGDLQSARKMFDRIPEKNVI 291

Query: 255 TWNAII 272
           +WNA+I
Sbjct: 292 SWNALI 297


>CAN66059.1 hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score = 95.9 bits (237), Expect = 3e-21
 Identities = 46/88 (52%), Positives = 59/88 (67%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           ++G+ FHG  V+CG  G+VFV   L+DLY KCG I  ARK+ D +   +VVSWT MIAGY
Sbjct: 140 KEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGY 199

Query: 189 AQHGQLDNALELFRMIPEKSVFTWNAII 272
           A    L  A +LF  +PEK+  +WNAII
Sbjct: 200 ASFSDLVEARKLFDEMPEKNAVSWNAII 227



 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 30/66 (45%), Positives = 44/66 (66%)
 Frame = +3

Query: 75  NVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDNALELFRMIPEKSVF 254
           N ++  Y KCG + SARK+ D + H +VVS+TTMI GYA+ G + +A  +F   PE+ V 
Sbjct: 224 NAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVV 283

Query: 255 TWNAII 272
            W+A+I
Sbjct: 284 AWSALI 289


>CBI30347.3 unnamed protein product, partial [Vitis vinifera]
          Length = 560

 Score = 95.9 bits (237), Expect = 4e-21
 Identities = 46/88 (52%), Positives = 59/88 (67%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           ++G+ FHG  V+CG  G+VFV   L+DLY KCG I  ARK+ D +   +VVSWT MIAGY
Sbjct: 188 KEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGY 247

Query: 189 AQHGQLDNALELFRMIPEKSVFTWNAII 272
           A    L  A +LF  +PEK+  +WNAII
Sbjct: 248 ASFSDLVEARKLFDEMPEKNAVSWNAII 275


>XP_002275884.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera] XP_019077429.1 PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score = 95.9 bits (237), Expect = 4e-21
 Identities = 46/88 (52%), Positives = 59/88 (67%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           ++G+ FHG  V+CG  G+VFV   L+DLY KCG I  ARK+ D +   +VVSWT MIAGY
Sbjct: 140 KEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGY 199

Query: 189 AQHGQLDNALELFRMIPEKSVFTWNAII 272
           A    L  A +LF  +PEK+  +WNAII
Sbjct: 200 ASFSDLVEARKLFDEMPEKNAVSWNAII 227



 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 30/66 (45%), Positives = 44/66 (66%)
 Frame = +3

Query: 75  NVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDNALELFRMIPEKSVF 254
           N ++  Y KCG + SARK+ D + H +VVS+TTMI GYA+ G + +A  +F   PE+ V 
Sbjct: 224 NAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVV 283

Query: 255 TWNAII 272
            W+A+I
Sbjct: 284 AWSALI 289


>XP_010679297.1 PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Beta vulgaris subsp. vulgaris] KMT19676.1 hypothetical
           protein BVRB_1g010620 [Beta vulgaris subsp. vulgaris]
          Length = 699

 Score = 95.9 bits (237), Expect = 4e-21
 Identities = 38/87 (43%), Positives = 63/87 (72%)
 Frame = +3

Query: 12  QGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYA 191
           +G+Q HG ++KCGY+ +V V   L D+Y KC  + +ARK+ D++   D++SWT++++GYA
Sbjct: 280 EGIQIHGVVIKCGYEDDVKVGTSLFDVYVKCNDVTNARKIFDQLNDKDLLSWTSILSGYA 339

Query: 192 QHGQLDNALELFRMIPEKSVFTWNAII 272
             G+L  A ELF  +PE+S+ +WNA++
Sbjct: 340 MAGRLKEAQELFDKMPERSIISWNAML 366



 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 24/67 (35%), Positives = 43/67 (64%)
 Frame = +3

Query: 27  HGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQL 206
           HG ++K G+ GNV +++ L+D+Y KC  ++ AR++ D I  P+ VSW  ++  Y + G+ 
Sbjct: 184 HGLILKRGFSGNVILASALVDIYGKCDEMEDARRMFDEIDRPNAVSWNVIVRRYLEVGEE 243

Query: 207 DNALELF 227
             A+ +F
Sbjct: 244 RRAISMF 250



 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 26/81 (32%), Positives = 48/81 (59%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           ++G + HG +++ GY+ +V V + ++ +Y+KC +I+ A K+       DV+ W  MI G 
Sbjct: 512 KKGKEIHGFMIRNGYEIDVVVLDSMLVMYSKCRHIEYALKIFKGASPRDVILWNFMITGC 571

Query: 189 AQHGQLDNALELFRMIPEKSV 251
             H + D AL+LF ++ +  V
Sbjct: 572 CHHYKADEALDLFDLMKDIGV 592


>XP_009343217.2 PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Pyrus x bretschneideri]
          Length = 494

 Score = 95.5 bits (236), Expect = 4e-21
 Identities = 45/88 (51%), Positives = 58/88 (65%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           ++G   HG  V+CG  G+VFV   L+DLY KC  I  ARK+ DR+    VVSWTTM+ GY
Sbjct: 137 KEGRAIHGSAVRCGVDGDVFVGTSLIDLYGKCREIVCARKVFDRMSERSVVSWTTMVVGY 196

Query: 189 AQHGQLDNALELFRMIPEKSVFTWNAII 272
           A  G L  A +LF  +P+K+V +WNAII
Sbjct: 197 ASVGDLVEANKLFDQMPQKNVVSWNAII 224



 Score = 58.2 bits (139), Expect = 7e-08
 Identities = 28/73 (38%), Positives = 44/73 (60%)
 Frame = +3

Query: 54  QGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDNALELFRM 233
           Q NV   N ++  + K G + +AR++ D +   DVVS+TTMI GYA++G + +A  LF  
Sbjct: 214 QKNVVSWNAIISGFVKMGDLVNARRIFDHMPDKDVVSYTTMIDGYAKYGDMASARFLFEQ 273

Query: 234 IPEKSVFTWNAII 272
            P   +  W+A+I
Sbjct: 274 APNIDIVAWSALI 286


>XP_009343520.2 PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Pyrus x bretschneideri]
          Length = 544

 Score = 95.5 bits (236), Expect = 5e-21
 Identities = 43/86 (50%), Positives = 58/86 (67%)
 Frame = +3

Query: 15  GLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQ 194
           G   HG+ VK G   +VFV N LM +Y+ CG++ SARKL D     DVVSW +MI GY +
Sbjct: 139 GRSIHGQAVKYGLDSDVFVQNSLMSMYSACGFLSSARKLFDETPGRDVVSWNSMIKGYLK 198

Query: 195 HGQLDNALELFRMIPEKSVFTWNAII 272
              LD AL+LFR + ++S+FTWN++I
Sbjct: 199 SRSLDEALKLFRKMKKRSIFTWNSVI 224



 Score = 58.2 bits (139), Expect = 7e-08
 Identities = 26/81 (32%), Positives = 43/81 (53%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           + G+  HG L + G   +V +   L+D+Y KCG +D A ++   +   D ++WT MI+  
Sbjct: 272 DHGIWVHGYLRRSGLDSDVVIGTALVDMYGKCGCVDKAYEVFQEMPRKDTLAWTAMISVM 331

Query: 189 AQHGQLDNALELFRMIPEKSV 251
           A HG  + A  LF+ +    V
Sbjct: 332 ALHGFGNEAFGLFKQMETAGV 352


>KZM98033.1 hypothetical protein DCAR_014605 [Daucus carota subsp. sativus]
          Length = 357

 Score = 93.6 bits (231), Expect = 9e-21
 Identities = 42/90 (46%), Positives = 62/90 (68%)
 Frame = +3

Query: 3   DFEQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIA 182
           D+  G   H ++V+ G  G+VFV N ++ LY+ CG +DSARK+ D +   D+VSW +M+ 
Sbjct: 79  DYGAGRSIHSQIVRYGVHGDVFVGNSVISLYSACGDVDSARKMFDEMWVRDIVSWNSMVI 138

Query: 183 GYAQHGQLDNALELFRMIPEKSVFTWNAII 272
           G  + G+LD ALELFR + EK+V TWN++I
Sbjct: 139 GCLRCGELDMALELFRRMSEKNVITWNSMI 168


>XP_010662353.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score = 94.7 bits (234), Expect = 9e-21
 Identities = 39/86 (45%), Positives = 61/86 (70%)
 Frame = +3

Query: 15  GLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQ 194
           GL  HG+++K G+ G++FV N L+  Y+ CG++ +AR L D + + DVVSW  +I GY +
Sbjct: 134 GLSVHGQIIKFGFHGDLFVQNSLISFYSACGFLSTARILFDEMSNRDVVSWNALITGYLR 193

Query: 195 HGQLDNALELFRMIPEKSVFTWNAII 272
            G++D+AL LFR + E++V TWN+ I
Sbjct: 194 SGEIDSALGLFRKMEERNVITWNSTI 219



 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 22/72 (30%), Positives = 42/72 (58%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           + G   H  L + G + ++ +   L+D+Y KCG ++SA ++  ++   D+++WT MI+ +
Sbjct: 267 DHGKWVHSYLKRSGLECDMVIGTALVDMYGKCGCVESAIEVFRKMPKKDILAWTAMISAF 326

Query: 189 AQHGQLDNALEL 224
           A HG    A +L
Sbjct: 327 ALHGLGKEAFDL 338


>GAV61852.1 PPR domain-containing protein/PPR_2 domain-containing protein
           [Cephalotus follicularis]
          Length = 548

 Score = 94.7 bits (234), Expect = 9e-21
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +3

Query: 15  GLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQ 194
           G+  HG+++K G   ++FV N L+  Y+ CG++  ARKL D +   DVVSW TMI GY +
Sbjct: 138 GMNLHGQVIKLGLYNDIFVHNSLISFYSACGFLSRARKLFDEMFDRDVVSWNTMIIGYMR 197

Query: 195 HGQLDNALELFRMIPEKSVFTWNAII 272
            G L+ AL+LF  + E+S+FTWN+II
Sbjct: 198 GGNLEGALDLFWKMEERSIFTWNSII 223



 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 23/74 (31%), Positives = 40/74 (54%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           + G   H  L + G + +V +   L+D+Y KCG +D A ++   +   D ++WT MI+ +
Sbjct: 271 DHGKWVHSYLRRSGLECDVVIGTALVDMYGKCGRVDRAYEVFIDMPKKDTLAWTAMISSF 330

Query: 189 AQHGQLDNALELFR 230
           A HG    A + F+
Sbjct: 331 ALHGYGKEAFDTFK 344


>JAU66709.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial
           [Noccaea caerulescens]
          Length = 128

 Score = 88.6 bits (218), Expect = 1e-20
 Identities = 36/86 (41%), Positives = 60/86 (69%)
 Frame = +3

Query: 15  GLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQ 194
           G Q H + +   Y  +  V + ++D+YAKCG++DSA+ + D IK  + +SWT M++GYA+
Sbjct: 3   GKQVHCRFIASEYSNDDVVKSSMVDMYAKCGFLDSAKSVFDSIKSKNTISWTAMVSGYAK 62

Query: 195 HGQLDNALELFRMIPEKSVFTWNAII 272
            G+ + ALELFR +P K++++W A+I
Sbjct: 63  SGRKEKALELFREMPVKNLYSWTALI 88


>XP_016464289.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Nicotiana tabacum]
          Length = 488

 Score = 94.4 bits (233), Expect = 1e-20
 Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
 Frame = +3

Query: 27  HGKLVKCGYQGNVFVSNVLMDLYAKCG-YIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQ 203
           HG +VK G++ +VF  N LMD YAKCG  + SARK+ D +   DVVSW TMI GY  HG 
Sbjct: 2   HGHIVKLGFESSVFAKNTLMDFYAKCGGNLGSARKVFDEMLDRDVVSWNTMIGGYMIHGD 61

Query: 204 LDNALELFRMIPEKSVFTWNAII 272
            + AL LF  +PE++V TWN++I
Sbjct: 62  QERALCLFEAMPERNVVTWNSVI 84



 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = +3

Query: 75  NVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGYAQHGQLDNALELFRMIPEKSVF 254
           N ++    K   I++AR + D +    V+SWT M++GYA  G L +A ++F  IPEK+V 
Sbjct: 112 NTMISGCVKLSNIEAARAVFDEMPEKSVISWTAMVSGYATIGDLQSARKMFDRIPEKNVI 171

Query: 255 TWNAII 272
           +WNA+I
Sbjct: 172 SWNALI 177


>XP_017243979.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Daucus carota subsp. sativus]
          Length = 542

 Score = 93.6 bits (231), Expect = 2e-20
 Identities = 42/90 (46%), Positives = 62/90 (68%)
 Frame = +3

Query: 3   DFEQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIA 182
           D+  G   H ++V+ G  G+VFV N ++ LY+ CG +DSARK+ D +   D+VSW +M+ 
Sbjct: 135 DYGAGRSIHSQIVRYGVHGDVFVGNSVISLYSACGDVDSARKMFDEMWVRDIVSWNSMVI 194

Query: 183 GYAQHGQLDNALELFRMIPEKSVFTWNAII 272
           G  + G+LD ALELFR + EK+V TWN++I
Sbjct: 195 GCLRCGELDMALELFRRMSEKNVITWNSMI 224



 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 25/74 (33%), Positives = 42/74 (56%)
 Frame = +3

Query: 9   EQGLQFHGKLVKCGYQGNVFVSNVLMDLYAKCGYIDSARKLLDRIKHPDVVSWTTMIAGY 188
           + G   H  LV+ G + ++ V   L+D+Y KCG +  A ++ + + + DV++WT MI+ +
Sbjct: 272 DHGKWVHNYLVRSGLECDMVVGTALIDMYGKCGSVKRAFEVFEEMPNKDVLAWTAMISVF 331

Query: 189 AQHGQLDNALELFR 230
             HG    A  LFR
Sbjct: 332 GYHGYSVEAFHLFR 345