BLASTX nr result

ID: Ephedra29_contig00028046 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00028046
         (358 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_007009443.2 PREDICTED: putative nuclease HARBI1 [Theobroma ca...    59   1e-07
EOY18253.1 RNA binding protein, putative [Theobroma cacao]             59   1e-07
XP_016678863.1 PREDICTED: putative nuclease HARBI1 [Gossypium hi...    54   7e-06

>XP_007009443.2 PREDICTED: putative nuclease HARBI1 [Theobroma cacao]
          Length = 400

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +1

Query: 199 PTDLDWWQELSNKLTSSGTFTSADEDKNFKSFLRMSRATFDYIVSLVKYDML 354
           P  LDWW E S ++  SGT + + + K+F+S  R+SR TFDYI SLVK DM+
Sbjct: 38  PQPLDWWDEFSKRI--SGTLSQSKDSKSFESVFRISRKTFDYICSLVKEDMM 87


>EOY18253.1 RNA binding protein, putative [Theobroma cacao]
          Length = 400

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +1

Query: 199 PTDLDWWQELSNKLTSSGTFTSADEDKNFKSFLRMSRATFDYIVSLVKYDML 354
           P  LDWW E S ++  SGT + + + K+F+S  R+SR TFDYI SLVK DM+
Sbjct: 38  PQPLDWWDEFSKRI--SGTLSQSKDSKSFESVFRISRKTFDYICSLVKEDMM 87


>XP_016678863.1 PREDICTED: putative nuclease HARBI1 [Gossypium hirsutum]
           XP_016678864.1 PREDICTED: putative nuclease HARBI1
           [Gossypium hirsutum]
          Length = 394

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 24/52 (46%), Positives = 36/52 (69%)
 Frame = +1

Query: 199 PTDLDWWQELSNKLTSSGTFTSADEDKNFKSFLRMSRATFDYIVSLVKYDML 354
           P  LDWW E SN++  SG  + + + ++F+S  R+SR TF+YI SLVK D++
Sbjct: 32  PQPLDWWDEFSNRI--SGPLSQSKDSQSFESVFRISRKTFNYICSLVKDDLM 81


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