BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00028041
         (301 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008229432.1 PREDICTED: pentatricopeptide repeat-containing pr...    86   1e-17
XP_008385425.2 PREDICTED: pentatricopeptide repeat-containing pr...    86   2e-17
XP_007207165.1 hypothetical protein PRUPE_ppa023637mg [Prunus pe...    85   3e-17
ONI01193.1 hypothetical protein PRUPE_6G127000 [Prunus persica]        85   3e-17
XP_018841006.1 PREDICTED: pentatricopeptide repeat-containing pr...    84   6e-17
XP_009338689.1 PREDICTED: pentatricopeptide repeat-containing pr...    83   9e-17
XP_013749830.1 PREDICTED: putative pentatricopeptide repeat-cont...    83   2e-16
XP_009146454.1 PREDICTED: putative pentatricopeptide repeat-cont...    83   2e-16
OAY38188.1 hypothetical protein MANES_11G160300 [Manihot esculen...    83   2e-16
XP_004293078.2 PREDICTED: pentatricopeptide repeat-containing pr...    83   2e-16
XP_016179404.1 PREDICTED: pentatricopeptide repeat-containing pr...    83   2e-16
XP_002318526.2 pentatricopeptide repeat-containing family protei...    82   3e-16
XP_011039111.1 PREDICTED: pentatricopeptide repeat-containing pr...    82   3e-16
XP_014522544.1 PREDICTED: pentatricopeptide repeat-containing pr...    82   3e-16
CDX97514.1 BnaA05g25650D [Brassica napus]                              82   4e-16
XP_013585368.1 PREDICTED: putative pentatricopeptide repeat-cont...    82   5e-16
XP_015942828.1 PREDICTED: pentatricopeptide repeat-containing pr...    82   6e-16
XP_015942827.1 PREDICTED: pentatricopeptide repeat-containing pr...    82   6e-16
XP_012072804.1 PREDICTED: pentatricopeptide repeat-containing pr...    81   7e-16
XP_015872304.1 PREDICTED: pentatricopeptide repeat-containing pr...    81   1e-15

>XP_008229432.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27610
           [Prunus mume]
          Length = 877

 Score = 86.3 bits (212), Expect = 1e-17
 Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGV---SDNVELGQQV 131
           R   SW +L+ GY + G +  A  +F EM++     +   FV+VLGV      VE G QV
Sbjct: 167 RTVVSWTSLIAGYARNGLNDQALELFSEMRLEGNKPNPHTFVNVLGVLAAKGMVEKGSQV 226

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  ++K GFE   +VCNSLI MY + G ++DA+ VFD M  RD
Sbjct: 227 HTMVIKNGFESITFVCNSLINMYLKSGIVEDAKAVFDCMPNRD 269


>XP_008385425.2 PREDICTED: pentatricopeptide repeat-containing protein At2g27610
           [Malus domestica]
          Length = 886

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDN---VELGQQV 131
           RN  SW +L+ GY + G +  A  +F EMQ+     +   F +VLGV  +   VE G+QV
Sbjct: 176 RNVVSWTSLVAGYARNGLNDRALELFSEMQLEGIKPNPYTFATVLGVLADEGMVEKGRQV 235

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  ++K+GFE  + VCNSLI MY + G + D+R VFD M  RD
Sbjct: 236 HTMVIKKGFESIMSVCNSLINMYLKSGIVRDSRAVFDGMESRD 278


>XP_007207165.1 hypothetical protein PRUPE_ppa023637mg [Prunus persica]
          Length = 731

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGV---SDNVELGQQV 131
           R   SW +L+ GY + G +  A  +F EM++     +   FV+VLGV      VE G QV
Sbjct: 21  RTVVSWTSLIAGYARNGLNDQALELFSEMRLQGNKPNPHTFVTVLGVLAAKGMVEKGSQV 80

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  ++K GFE   +VCNSLI MY + G + DA+ VFD M  RD
Sbjct: 81  HTMVIKNGFESITFVCNSLINMYLKSGIVKDAKAVFDCMPNRD 123



 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = -1

Query: 289 SWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGV----SDNVELGQQVHCS 122
           +W A+L GY Q G    A +++ ++     + +     S++      +  VE G+Q H  
Sbjct: 325 AWSAMLSGYAQIGDTEGAVKIYLQLAREGVIPNEFTLSSIINACAAPTAAVEQGKQFHAC 384

Query: 121 IVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
            +K    + L + ++L+ MY +RG +D A +VF    ERD
Sbjct: 385 SIKLRLNNTLCLSSALVTMYAKRGNIDSANEVFKRQGERD 424


>ONI01193.1 hypothetical protein PRUPE_6G127000 [Prunus persica]
          Length = 877

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGV---SDNVELGQQV 131
           R   SW +L+ GY + G +  A  +F EM++     +   FV+VLGV      VE G QV
Sbjct: 167 RTVVSWTSLIAGYARNGLNDQALELFSEMRLQGNKPNPHTFVTVLGVLAAKGMVEKGSQV 226

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  ++K GFE   +VCNSLI MY + G + DA+ VFD M  RD
Sbjct: 227 HTMVIKNGFESITFVCNSLINMYLKSGIVKDAKAVFDCMPNRD 269



 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = -1

Query: 289 SWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGV----SDNVELGQQVHCS 122
           +W A+L GY Q G    A +++ ++     + +     S++      +  VE G+Q H  
Sbjct: 471 AWSAMLSGYAQIGDTEGAVKIYLQLAREGVIPNEFTLSSIINACAAPTAAVEQGKQFHAC 530

Query: 121 IVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
            +K    + L + ++L+ MY +RG +D A +VF    ERD
Sbjct: 531 SIKLRLNNTLCLSSALVTMYAKRGNIDSANEVFKRQGERD 570


>XP_018841006.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Juglans regia]
          Length = 792

 Score = 84.3 bits (207), Expect = 6e-17
 Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHT-DAFRVFGEMQMANEVIDHVAF---VSVLGVSDNVELGQQ 134
           R+  SW A+L GY Q+G H+ +A   F +M      +DHV+F   VS  G    +ELG+Q
Sbjct: 242 RDLVSWNAILSGYAQEGNHSLEAILAFIKMVREGITLDHVSFTSAVSACGHEVTLELGRQ 301

Query: 133 VHCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           +H  I+KRG+E H+ VCN LI+MY +   ++DA+ VF  M+ER+
Sbjct: 302 IHGLIIKRGYEKHVSVCNVLISMYSKCEVVEDAKLVFQIMNERN 345



 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = -1

Query: 289 SWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVE---LGQQVHCSI 119
           SW  +L G+ +     DA      M +     D V + +VL    + E    G Q+H   
Sbjct: 148 SWNTMLSGFPKS---EDALAFALRMNLNGIAFDPVTYCTVLAFCSDDEGFLFGLQLHSLA 204

Query: 118 VKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           +K GF   ++V N+LI+MY R G L +AR VFD M ERD
Sbjct: 205 IKFGFYCEVFVANALISMYSRCGQLMEARTVFDEMPERD 243



 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVL---GVSDNVELGQQV 131
           RN  SW  ++   ++     DA  +F EM++ +   + V F+ ++    + + VE GQ V
Sbjct: 344 RNVVSWTTMISFNDE-----DAVSLFNEMRLDDVYPNDVTFIGLIHAISIRNMVEEGQMV 398

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H   +K  F     VCNSLI MY +  T+ D+ +VF+ +  R+
Sbjct: 399 HGYCIKTSFFSEPNVCNSLITMYAKFATMHDSLRVFEELDYRE 441



 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHV--AFVSVLGVSDNVEL--GQQ 134
           R T SW AL+ GY Q G + +A   F      ++   +   + +S +G ++++ L  GQ+
Sbjct: 440 RETISWNALISGYAQNGFYPEALCTFLSAITESKPNQYTFGSVLSAIGAAEDISLKYGQR 499

Query: 133 VHCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVF 23
            H  ++K+GF+    V  +L+ MY +RG++ ++ +VF
Sbjct: 500 CHSYLIKQGFDSDPIVSGALLDMYAKRGSICESEKVF 536


>XP_009338689.1 PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like, partial [Pyrus x bretschneideri]
          Length = 369

 Score = 83.2 bits (204), Expect = 9e-17
 Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDN---VELGQQV 131
           RN  SW +L+ GY + G +  A  +F EMQ+     +   F +VLGV  +   VE G+QV
Sbjct: 164 RNVVSWTSLVAGYSRNGLNDQALELFTEMQLEGIKPNPYTFATVLGVLADEGMVEKGRQV 223

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  ++K GFE  + VCNSLI MY + G + D+R VF  M  RD
Sbjct: 224 HTMVIKNGFESIMSVCNSLINMYLKSGIVRDSRAVFHCMERRD 266



 Score = 55.8 bits (133), Expect = 6e-07
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVE---LGQQV 131
           R+  +W +L+ GY   G   +AF +F +M++A        FV+V+ +  N +     +Q+
Sbjct: 265 RDAVTWNSLIAGYVMNGFDLEAFEMFNQMRLAGFKFTEAIFVTVIKLCANFKELVFARQL 324

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYM 14
            C +VK G      +  +L+  Y + G +DDA ++F  M
Sbjct: 325 QCRVVKTGLAFDRNIQTALMVAYSKCGEMDDAYKIFSMM 363


>XP_013749830.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial [Brassica napus]
          Length = 626

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 39/100 (39%), Positives = 62/100 (62%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVELGQQVHCS 122
           +N  SW A++  Y Q G  ++A  VF EM  A+   +H  F SVL     + +G+QVH  
Sbjct: 115 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRADGKPNHFTFASVLTSCSGLSVGKQVHGL 174

Query: 121 IVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           I+K  ++ H+YV +SL+ MY + G +++AR+VF+ + ERD
Sbjct: 175 IIKLSYDSHIYVGSSLLDMYAKAGRIEEAREVFECLPERD 214



 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVEL---GQQV 131
           R+  S  A++ GY Q G   +A +VF ++       ++V + SVL     + L   G+QV
Sbjct: 213 RDVVSCTAIITGYAQLGLDEEALQVFQKLLSQGMSPNYVTYASVLTALSGLALLDHGKQV 272

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           HC +++R    +  + NSLI MY + G L  AR++FD M E +
Sbjct: 273 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPETE 315


>XP_009146454.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial [Brassica rapa]
          Length = 626

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 39/100 (39%), Positives = 62/100 (62%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVELGQQVHCS 122
           +N  SW A++  Y Q G  ++A  VF EM  A+   +H  F SVL     + +G+QVH  
Sbjct: 115 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRADGKPNHFTFASVLTSCSGLSVGKQVHGL 174

Query: 121 IVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           I+K  ++ H+YV +SL+ MY + G +++AR+VF+ + ERD
Sbjct: 175 IIKLSYDSHVYVGSSLLDMYAKAGRIEEAREVFECLPERD 214



 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVEL---GQQV 131
           R+  S  A++  Y Q G   +A +VF ++       ++V + SVL     + L   G+QV
Sbjct: 213 RDVVSCTAIITAYAQLGLDEEALQVFQKLLSQGMSPNYVTYASVLTALSGLALLDHGKQV 272

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           HC +++R    +  + NSLI MY + G L  AR++FD M E +
Sbjct: 273 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPETE 315


>OAY38188.1 hypothetical protein MANES_11G160300 [Manihot esculenta] OAY38189.1
           hypothetical protein MANES_11G160300 [Manihot esculenta]
          Length = 879

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 45/103 (43%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDN---VELGQQV 131
           RN  SW +LL GY Q G   +A   F  MQ      +   F +VLG   +   VE G QV
Sbjct: 169 RNVVSWTSLLAGYAQNGLSVEALNCFFRMQTEGIKPNPFTFATVLGALADKAIVEKGVQV 228

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  ++K GF+  +YVCNSLI MY + G + DAR VFD M +R+
Sbjct: 229 HTMVIKNGFDTSIYVCNSLINMYSKSGMVRDARAVFDSMVDRN 271



 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
 Frame = -1

Query: 289 SWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDN----VELGQQVHCS 122
           +W A++ GY Q G    + ++F +M       +   F SV+    +    VE G+Q+H  
Sbjct: 473 AWSAMVAGYAQMGDTEGSVKIFIQMVKDGVEPNEYTFSSVINACCSPTAAVEQGKQLHAW 532

Query: 121 IVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
            +K  F D L V +SL+ MY +RG +D A +VF     RD
Sbjct: 533 SIKLRFNDALCVSSSLVTMYAKRGDIDSANEVFKRQRVRD 572



 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVE---LGQQV 131
           RN  SW  ++ GY   G H +AF +F  +++    +  + F S++    N+E     +Q+
Sbjct: 270 RNDVSWNTMVAGYVTNGLHLEAFEMFYYLRLGGVKLTSMIFASIIKSCANIEELGFARQL 329

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYM 14
            C  +K GFE  L V  +L+  Y +   +D A ++F  M
Sbjct: 330 QCQALKGGFEFALNVRTALMVAYSKCKDMDAAFKIFSTM 368


>XP_004293078.2 PREDICTED: pentatricopeptide repeat-containing protein At2g27610
           [Fragaria vesca subsp. vesca]
          Length = 934

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGV---SDNVELGQQV 131
           RN  SW +L+ GY   G +  A  +F EMQ +  + +  A+V+VLGV     +V  G+QV
Sbjct: 224 RNVVSWTSLISGYAWNGWNEQALELFTEMQASGSMANPFAYVAVLGVLADEGSVGKGEQV 283

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  +VK G+    +VCNSL+ MYF+ G + +AR VFD M  RD
Sbjct: 284 HGMVVKNGYVAITFVCNSLVNMYFKSGMVSEARAVFDGMECRD 326



 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVE---LGQQV 131
           R+  +W  L+ GY   G   +AF +F  M +A        FV+V+ +  + E     +Q+
Sbjct: 325 RDEVTWNTLIAGYVGNGLELEAFEMFYLMGLAGVKFTQPVFVTVIKLCASYEELGFARQL 384

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYM 14
           HC ++K G E H  +  +L+  Y +   +DDA  +F  M
Sbjct: 385 HCRVLKSGLESHRNIETALLVAYSKCREMDDAFNMFSMM 423


>XP_016179404.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Arachis ipaensis] XP_016179405.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial-like [Arachis ipaensis]
          Length = 989

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVEL---GQQV 131
           R+  SW A++VGY Q+   TDAF++F +M++   V D VA  S+L    NV+L   G Q 
Sbjct: 491 RDNISWNAIIVGYVQEEEETDAFKMFNKMRLHGIVPDEVALASILSACGNVKLLEAGLQF 550

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSE 8
           HC  VK G E +L+V +SLI MY +  +++DAR+++  M E
Sbjct: 551 HCLAVKLGLETNLFVGSSLIDMYSKCWSIEDARKIYSNMPE 591



 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVS---DNVELGQQV 131
           +N  +W A+L  Y Q G       +F  M       D   F S+L      +++E+G+QV
Sbjct: 390 KNMVTWNAMLGVYAQNGYFNHVLELFLNMTRRTIEPDEFTFTSILSSCACFESLEIGRQV 449

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  ++KR F ++L+V N+L+ MY + G L +AR+ F+ M  RD
Sbjct: 450 HSVVIKRSFANNLFVNNALVDMYAKAGALKEARKQFERMKTRD 492



 Score = 61.2 bits (147), Expect = 8e-09
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
 Frame = -1

Query: 298 NTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNV---ELGQQVH 128
           N  +W A++ G+ + G H +A   F EM+            SVL    ++   + G  VH
Sbjct: 290 NVVAWNAMISGHAKSGHHKEAIEFFLEMRKCGIKSSRSTLASVLSAIASLAALDYGLLVH 349

Query: 127 CSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
              +K+G    +YV +SLI+MY +   LD A+QVFD MSE++
Sbjct: 350 GEAIKQGLGSSIYVGSSLISMYGKCEMLDAAKQVFDVMSEKN 391


>XP_002318526.2 pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] EEE96746.2 pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 578

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNV---ELGQQV 131
           R++ SW A++ GY Q G   +A   F EMQ   E ++  +F   L    N+   ELG+Q+
Sbjct: 169 RDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQL 228

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           HC +VK G++   YV N+L+AMY + G++D+AR  F  + E+D
Sbjct: 229 HCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKD 271


>XP_011039111.1 PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Populus euphratica]
          Length = 771

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNV---ELGQQV 131
           R++ SW A++ GY Q G   +A   F EMQ   E ++  +F   L    N+   ELG+Q+
Sbjct: 362 RDSISWSAMIAGYSQNGYSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGKQL 421

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           HC +VK G++   YV N+L+AMY + G++D+AR  F+ + E+D
Sbjct: 422 HCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFEEILEKD 464


>XP_014522544.1 PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vigna radiata var. radiata]
          Length = 818

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGV---SDNVELGQQV 131
           R+ GSW A++ G+ Q G  T A  V G M++    +D V   SVL V   +++V  G  V
Sbjct: 205 RDVGSWNAMISGFLQNGKATSALGVLGRMKVEGVKMDTVTVASVLPVCAQANDVVCGMLV 264

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  ++K G E  L+VCN+LI MY + G L DA++VFD M  RD
Sbjct: 265 HLYVIKHGLESDLFVCNALINMYSKFGRLQDAQRVFDGMKVRD 307



 Score = 58.5 bits (140), Expect = 7e-08
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVI--DHVAFVSVLGVSDNVELGQQVH 128
           +N  +W +++  + + G + DA     E+ ++N  +  D   F  VL    +V  G+++H
Sbjct: 106 KNIFTWNSMVAVFVKCGRYRDAMNCVSEL-LSNSGVRPDFYTFPPVLKACVSVVDGEKMH 164

Query: 127 CSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           C ++K GFE  +YV  SLI +Y R   +D A +VFD M  RD
Sbjct: 165 CWVLKMGFEHDVYVAASLIHLYSRFSAVDVAHKVFDDMPVRD 206



 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQ---MANEVIDHVAFVSVLGVSDNVELGQQV 131
           R+  SW +++  YEQ      A  +F  MQ   M  +++  V+ +S+     +  +G+ V
Sbjct: 306 RDVVSWNSIIAAYEQNDDPVTALCLFKGMQFGGMGPDLLTVVSLISIFVQLSDRRIGRAV 365

Query: 130 HCSIVKRGF-EDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  +++RG+ E+ + + N+L+ MY + G +D AR VF+ +  RD
Sbjct: 366 HGYVMRRGWLEEDVVIGNALVNMYAKLGLIDCARAVFEQLPRRD 409


>CDX97514.1 BnaA05g25650D [Brassica napus]
          Length = 626

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 39/100 (39%), Positives = 61/100 (61%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVELGQQVHCS 122
           +N  SW A++  Y Q G  ++A  VF EM  A+   +H  F SVL       +G+QVH  
Sbjct: 115 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRADGKPNHFTFASVLTSCSGSSVGKQVHGL 174

Query: 121 IVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           I+K  ++ H+YV +SL+ MY + G +++AR+VF+ + ERD
Sbjct: 175 IIKLSYDSHIYVGSSLLDMYAKAGRIEEAREVFECLPERD 214



 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVEL---GQQV 131
           R+  S  A++  Y Q G   +A +VF ++       ++V + SVL     + L   G+QV
Sbjct: 213 RDVVSCTAIITAYAQLGLDEEALQVFQKLLSQGMSPNYVTYASVLTALSGLALLDHGKQV 272

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           HC +++R    +  + NSLI MY + G L  AR++FD M E +
Sbjct: 273 HCHVLRRELPLYAVLQNSLIDMYSKCGNLAYARRLFDNMPETE 315


>XP_013585368.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial [Brassica oleracea var.
           oleracea] XP_013737791.1 PREDICTED: putative
           pentatricopeptide repeat-containing protein At3g13770,
           mitochondrial [Brassica napus]
          Length = 623

 Score = 81.6 bits (200), Expect = 5e-16
 Identities = 38/100 (38%), Positives = 62/100 (62%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVELGQQVHCS 122
           +N  SW A++  Y Q G  ++A  +F EM  A+   +H  F SVL     + +G+QVH  
Sbjct: 112 KNVVSWTAMISRYSQTGHSSEALTLFAEMMRADGKPNHFTFASVLTSCSGLSVGKQVHGL 171

Query: 121 IVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           I+K  ++ H+YV +SL+ MY + G +++AR+VF+ + ERD
Sbjct: 172 IIKWSYDSHIYVGSSLLDMYAKAGRIEEAREVFECLPERD 211



 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVEL---GQQV 131
           R+  S  A++  Y Q G   +A +VF ++       ++V + SVL     + L   G+QV
Sbjct: 210 RDVVSCTAIITAYAQLGLDEEALQVFQKLLSQGMSPNYVTYASVLTALSGLALLDHGKQV 269

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           HC +++R    +  + NSLI MY + G L  AR++FD M E +
Sbjct: 270 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPETE 312


>XP_015942828.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X2 [Arachis duranensis]
          Length = 989

 Score = 81.6 bits (200), Expect = 6e-16
 Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVEL---GQQV 131
           R+T SW A++VGY Q+   TDAF++   M++   V D VA  S+L    NV+L   G Q 
Sbjct: 491 RDTISWNAIIVGYVQEEEETDAFKMVNRMRLHGIVPDEVALASILSACGNVKLLKAGLQF 550

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSE 8
           HC  VK G E +L+V +SLI MY +  +++DAR+++  M E
Sbjct: 551 HCLAVKLGLETNLFVGSSLIDMYSKCWSIEDARKIYSSMPE 591



 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVS---DNVELGQQV 131
           +N  +W A+L  Y Q G       +F +M      +D   F S+L      +++E+G+QV
Sbjct: 390 KNMVTWNAMLGVYAQNGYFNHVMELFLDMTRRTIELDEFTFTSILSSCACFESLEIGRQV 449

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  ++KR F ++L+V N+L+ MY + G L +AR+ F+ M  RD
Sbjct: 450 HSVVIKRSFANNLFVNNALVDMYAKAGALKEARKQFERMKTRD 492



 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
 Frame = -1

Query: 298 NTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNV---ELGQQVH 128
           N  +W A++ G+ ++  H +A   F EM+            SVL    ++   + G  VH
Sbjct: 290 NVVAWNAMISGHAKRSHHKEAIEFFLEMRKCGIKSSRSTLASVLSAIASLAALDYGLLVH 349

Query: 127 CSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
              +K+G +  +YV +SLI+MY +   LD A+QVFD MSE++
Sbjct: 350 GEAIKQGLDSSIYVGSSLISMYGKCEMLDAAKQVFDVMSEKN 391


>XP_015942827.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X1 [Arachis duranensis]
          Length = 1065

 Score = 81.6 bits (200), Expect = 6e-16
 Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNVEL---GQQV 131
           R+T SW A++VGY Q+   TDAF++   M++   V D VA  S+L    NV+L   G Q 
Sbjct: 491 RDTISWNAIIVGYVQEEEETDAFKMVNRMRLHGIVPDEVALASILSACGNVKLLKAGLQF 550

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSE 8
           HC  VK G E +L+V +SLI MY +  +++DAR+++  M E
Sbjct: 551 HCLAVKLGLETNLFVGSSLIDMYSKCWSIEDARKIYSSMPE 591



 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVS---DNVELGQQV 131
           +N  +W A+L  Y Q G       +F +M      +D   F S+L      +++E+G+QV
Sbjct: 390 KNMVTWNAMLGVYAQNGYFNHVMELFLDMTRRTIELDEFTFTSILSSCACFESLEIGRQV 449

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  ++KR F ++L+V N+L+ MY + G L +AR+ F+ M  RD
Sbjct: 450 HSVVIKRSFANNLFVNNALVDMYAKAGALKEARKQFERMKTRD 492



 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
 Frame = -1

Query: 298 NTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNV---ELGQQVH 128
           N  +W A++ G+ ++  H +A   F EM+            SVL    ++   + G  VH
Sbjct: 290 NVVAWNAMISGHAKRSHHKEAIEFFLEMRKCGIKSSRSTLASVLSAIASLAALDYGLLVH 349

Query: 127 CSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
              +K+G +  +YV +SLI+MY +   LD A+QVFD MSE++
Sbjct: 350 GEAIKQGLDSSIYVGSSLISMYGKCEMLDAAKQVFDVMSEKN 391


>XP_012072804.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27610
           [Jatropha curcas] KDP37589.1 hypothetical protein
           JCGZ_07935 [Jatropha curcas]
          Length = 879

 Score = 81.3 bits (199), Expect = 7e-16
 Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDN---VELGQQV 131
           RN  SW +LL GY Q G + +A + F  MQ      +   F +VLG   +    E G +V
Sbjct: 169 RNVVSWTSLLTGYAQNGLNVEALKCFFRMQAEGIKPNPFTFATVLGALADKAMAEKGIKV 228

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  +VK GFE++ +VCNSLI MY + G + +AR +F+ M++RD
Sbjct: 229 HTMVVKNGFEENRFVCNSLINMYSKSGMVGEARAIFESMADRD 271



 Score = 57.8 bits (138), Expect = 1e-07
 Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNV-ELG--QQV 131
           R+  +W +++ GY   G +++AF  F  +++A   +  + F SV+    N+ ELG  +Q+
Sbjct: 270 RDIITWHSMVTGYVTNGLYSEAFETFYHLRLAGLKLTSMLFASVIKSCANIKELGFARQL 329

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSE 8
           HC ++K GF+    V  +L+  Y +   +DDA ++F  M E
Sbjct: 330 HCQVLKGGFDFDHNVRTALMVAYSKSKEMDDAFKIFSAMHE 370



 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
 Frame = -1

Query: 289 SWKALLVGYEQQGAHTDAFRVFGEMQMANEVID--HVAFVSVLGV----SDNVELGQQVH 128
           +W A++ GY Q G    A ++F  +QMA E ++     F SV+      +  VE G+  H
Sbjct: 473 AWSAMIAGYAQIGDTEGAVKIF--IQMAKEGVEPNEYTFSSVINACAVPTAAVEQGKPFH 530

Query: 127 CSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
              +K  F D L V ++L+ MY +RG ++ A +VF     RD
Sbjct: 531 AWSIKSRFNDALCVSSALVTMYAKRGDIESASEVFKRQEVRD 572


>XP_015872304.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27610
           [Ziziphus jujuba]
          Length = 731

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDN---VELGQQV 131
           RN GSW +LL GY Q G +  A  +F +M +     +     ++LG   +   V  G QV
Sbjct: 21  RNVGSWTSLLTGYAQNGLNDKALSIFSQMHVEGVKPNPFTLAAILGALADYGMVGKGVQV 80

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
           H  I K GFE +L+VCNSLI MY + G + +AR VFD M  R+
Sbjct: 81  HAIIAKSGFESNLFVCNSLINMYSKSGIVREARVVFDSMENRN 123



 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
 Frame = -1

Query: 301 RNTGSWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGVSDNV-ELG--QQV 131
           RN  +W  ++ GY   G   +AF++F  M++A E +  + F +++ +  N+ ELG  +Q+
Sbjct: 122 RNAVTWNGMIAGYVTNGMDLEAFKLFYWMRLAGEKLTQMIFATLIKLCANIKELGFARQL 181

Query: 130 HCSIVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVF 23
           HC ++K GF     +  +L+  Y +   +DDA ++F
Sbjct: 182 HCRVLKCGFAFDHNIKTALMVAYNKCSEMDDAFKMF 217



 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
 Frame = -1

Query: 289 SWKALLVGYEQQGAHTDAFRVFGEMQMANEVIDHVAFVSVLGV----SDNVELGQQVHCS 122
           +W A+L GY Q G      ++F ++     + +   F SV+      +   E G+Q H  
Sbjct: 325 AWSAMLAGYAQIGETEGCVKLFAQLAKEGFIPNEFTFSSVIHACAAPTAAFEQGKQFHAL 384

Query: 121 IVKRGFEDHLYVCNSLIAMYFRRGTLDDARQVFDYMSERD 2
            +K    + L V ++LI MY +RG +  A +VF    ERD
Sbjct: 385 SIKSRLHNALCVSSALITMYAKRGNIKSANEVFKRQDERD 424