BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00027941
         (208 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EYU39396.1 hypothetical protein MIMGU_mgv1a026743mg, partial [Er...    71   7e-13
XP_012835082.1 PREDICTED: pentatricopeptide repeat-containing pr...    71   7e-13
XP_011621300.1 PREDICTED: pentatricopeptide repeat-containing pr...    70   1e-12
XP_012485584.1 PREDICTED: putative pentatricopeptide repeat-cont...    70   1e-12
XP_012485583.1 PREDICTED: putative pentatricopeptide repeat-cont...    70   1e-12
CDY23638.1 BnaC05g39560D [Brassica napus]                              68   1e-12
CDX97514.1 BnaA05g25650D [Brassica napus]                              70   2e-12
XP_012571369.1 PREDICTED: pentatricopeptide repeat-containing pr...    70   2e-12
KCW59311.1 hypothetical protein EUGRSUZ_H01992 [Eucalyptus grandis]    70   2e-12
XP_010070499.1 PREDICTED: pentatricopeptide repeat-containing pr...    70   2e-12
XP_016671506.1 PREDICTED: putative pentatricopeptide repeat-cont...    69   3e-12
XP_007203614.1 hypothetical protein PRUPE_ppa002292mg [Prunus pe...    69   5e-12
EOX98930.1 Pentatricopeptide repeat (PPR) superfamily protein [T...    69   6e-12
XP_011629214.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   6e-12
XP_006855406.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   6e-12
XP_013585368.1 PREDICTED: putative pentatricopeptide repeat-cont...    68   9e-12
KJB36078.1 hypothetical protein B456_006G139600 [Gossypium raimo...    68   9e-12
XP_012485585.1 PREDICTED: putative pentatricopeptide repeat-cont...    68   9e-12
XP_011085507.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   1e-11
XP_010278232.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   1e-11

>EYU39396.1 hypothetical protein MIMGU_mgv1a026743mg, partial [Erythranthe
           guttata]
          Length = 670

 Score = 71.2 bits (173), Expect = 7e-13
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV 181
           K +HSHI  SG  P  ++ N +L LY KC+ + DARK+FDE+   +VCSW T+IS YA++
Sbjct: 84  KRVHSHIKGSGFAPGVFISNKILDLYCKCESISDARKLFDEMGDRDVCSWNTLISGYAKM 143


>XP_012835082.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
           [Erythranthe guttata]
          Length = 683

 Score = 71.2 bits (173), Expect = 7e-13
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV 181
           K +HSHI  SG  P  ++ N +L LY KC+ + DARK+FDE+   +VCSW T+IS YA++
Sbjct: 97  KRVHSHIKGSGFAPGVFISNKILDLYCKCESISDARKLFDEMGDRDVCSWNTLISGYAKM 156


>XP_011621300.1 PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Amborella trichopoda]
          Length = 582

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 32/64 (50%), Positives = 46/64 (71%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV 181
           KL+H+HI   G IP+T+L N +L++Y+K    K+ARKVFD++ H NV SWTT+ISAY   
Sbjct: 33  KLIHAHISSPGFIPNTFLLNNILNMYSKFGLSKEARKVFDKMLHRNVVSWTTMISAYTNT 92

Query: 182 NPSQ 193
             ++
Sbjct: 93  GSNE 96


>XP_012485584.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial isoform X2 [Gossypium
           raimondii]
          Length = 602

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 32/68 (47%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   MHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYA-RVN 184
           +H+H+I++ ++P  YL+N L+ LY+KC R+++AR V DE+   NV SWT +ISAY+ R  
Sbjct: 92  VHAHMIKTRYLPPVYLRNRLIILYSKCDRLREARNVLDEMPEKNVVSWTAMISAYSQRGF 151

Query: 185 PSQSLDLF 208
            +++LDLF
Sbjct: 152 ATEALDLF 159


>XP_012485583.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial isoform X1 [Gossypium
           raimondii] KJB36077.1 hypothetical protein
           B456_006G139500 [Gossypium raimondii]
          Length = 646

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 32/68 (47%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   MHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYA-RVN 184
           +H+H+I++ ++P  YL+N L+ LY+KC R+++AR V DE+   NV SWT +ISAY+ R  
Sbjct: 92  VHAHMIKTRYLPPVYLRNRLIILYSKCDRLREARNVLDEMPEKNVVSWTAMISAYSQRGF 151

Query: 185 PSQSLDLF 208
            +++LDLF
Sbjct: 152 ATEALDLF 159


>CDY23638.1 BnaC05g39560D [Brassica napus]
          Length = 182

 Score = 68.2 bits (165), Expect = 1e-12
 Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   MHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV-N 184
           +H+H+I++ + P TYL+N LL  Y KC R+ DA KV DE+   NV SWT +IS Y++  +
Sbjct: 70  VHTHMIKTSYFPPTYLRNRLLIFYGKCDRLADAHKVLDEMPDKNVVSWTAMISRYSQTGH 129

Query: 185 PSQSLDLF 208
            S++L LF
Sbjct: 130 SSEALTLF 137


>CDX97514.1 BnaA05g25650D [Brassica napus]
          Length = 626

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   MHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV-N 184
           +H+H+I++ + P TYLQN LL LY KC R++DA KV DE+   NV SWT +IS Y++  +
Sbjct: 73  VHAHMIKTLYFPSTYLQNRLLILYGKCDRLQDAHKVLDEMPEKNVVSWTAMISRYSQTGH 132

Query: 185 PSQSLDLF 208
            S++L +F
Sbjct: 133 SSEALTVF 140


>XP_012571369.1 PREDICTED: pentatricopeptide repeat-containing protein At4g08210
           [Cicer arietinum] XP_012571370.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g08210
           [Cicer arietinum] XP_012571371.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g08210
           [Cicer arietinum] XP_012571372.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g08210
           [Cicer arietinum]
          Length = 689

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 30/70 (42%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV 181
           K +HS+II+SGH  + ++ N ++S+Y KC    DAR +FDE+ H N+ SWTT++SA+   
Sbjct: 23  KSLHSYIIKSGHFNNLFILNNMISVYAKCSSFYDARNLFDEMPHRNIISWTTMVSAFTNS 82

Query: 182 N-PSQSLDLF 208
             P ++L+L+
Sbjct: 83  GMPHEALNLY 92



 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 27/59 (45%), Positives = 35/59 (59%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYAR 178
           KL+H  I QS    DT L N LL +Y KC  +K A++VF EI   N  SW T+I  +A+
Sbjct: 125 KLVHYRIFQSKLDIDTVLMNALLDMYVKCGSLKAAQQVFYEIKCKNATSWNTLILGHAK 183


>KCW59311.1 hypothetical protein EUGRSUZ_H01992 [Eucalyptus grandis]
          Length = 628

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 28/59 (47%), Positives = 42/59 (71%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYAR 178
           K++H+H+ ++G  P   + N L+ +YTKC  + DARK FDE+ H ++CSW T+IS YAR
Sbjct: 42  KMVHAHMGRAGFTPGVVISNRLIDMYTKCDSLVDARKTFDEMPHRDLCSWNTMISGYAR 100



 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 20/59 (33%), Positives = 41/59 (69%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYAR 178
           K +H ++++SG  P ++ ++ L+ +Y KC  ++ A +VF E+ HP++ SWT++I  +A+
Sbjct: 276 KQVHGYMMRSGFDPSSFAESALVHMYAKCGNMESAERVFREMPHPDLVSWTSLIVGFAQ 334


>XP_010070499.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
           [Eucalyptus grandis]
          Length = 722

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 28/59 (47%), Positives = 42/59 (71%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYAR 178
           K++H+H+ ++G  P   + N L+ +YTKC  + DARK FDE+ H ++CSW T+IS YAR
Sbjct: 136 KMVHAHMGRAGFTPGVVISNRLIDMYTKCDSLVDARKTFDEMPHRDLCSWNTMISGYAR 194



 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 20/59 (33%), Positives = 41/59 (69%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYAR 178
           K +H ++++SG  P ++ ++ L+ +Y KC  ++ A +VF E+ HP++ SWT++I  +A+
Sbjct: 370 KQVHGYMMRSGFDPSSFAESALVHMYAKCGNMESAERVFREMPHPDLVSWTSLIVGFAQ 428


>XP_016671506.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial [Gossypium hirsutum]
          Length = 646

 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 31/68 (45%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   MHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYA-RVN 184
           +H+H+I++ ++P  YL+N L+  Y+KC R+++AR V DE+   NV SWT +ISAY+ R  
Sbjct: 92  VHAHMIKTRYLPSVYLRNRLIIFYSKCDRLREARNVLDEMPEKNVVSWTAMISAYSQRGF 151

Query: 185 PSQSLDLF 208
            +++LDLF
Sbjct: 152 ATEALDLF 159


>XP_007203614.1 hypothetical protein PRUPE_ppa002292mg [Prunus persica] ONH96601.1
           hypothetical protein PRUPE_7G139900 [Prunus persica]
          Length = 691

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 30/60 (50%), Positives = 43/60 (71%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV 181
           KL+H+H   SG +P  ++ N L+ LY KC  + DA+KVFDE+S  ++CSW T+IS YA+V
Sbjct: 105 KLVHAHTKVSGFVPGLFICNRLIDLYAKCGSLVDAQKVFDEMSERDLCSWNTMISGYAKV 164


>EOX98930.1 Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 642

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 30/63 (47%), Positives = 43/63 (68%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV 181
           KL+H H+  +GH P T+L NIL+S+Y K   ++ AR +FD++   NV +WTT+ISAYA  
Sbjct: 93  KLVHKHVFSNGHQPKTFLVNILISMYVKFNLLEQARALFDQMPERNVVTWTTMISAYANA 152

Query: 182 NPS 190
             S
Sbjct: 153 KLS 155


>XP_011629214.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Amborella trichopoda]
          Length = 715

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV 181
           K++H H+ + G   D Y+QN  +++Y  C  ++ ARKVFD++   NV SWTT+I++YA++
Sbjct: 161 KMLHCHVFKLGFQEDIYVQNAQINMYANCDGLESARKVFDKMIDKNVVSWTTMIASYAKM 220

Query: 182 NPS-QSLDLF 208
           + S ++LDLF
Sbjct: 221 DMSEEALDLF 230


>XP_006855406.1 PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Amborella trichopoda] ERN16873.1 hypothetical protein
           AMTR_s00057p00151990 [Amborella trichopoda]
          Length = 866

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 27/58 (46%), Positives = 43/58 (74%)
 Frame = +2

Query: 5   LMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYAR 178
           ++H+H+ Q+G +PD ++QN L+++Y KC  +  A KVFDE+ H +V SW+T+I  YAR
Sbjct: 105 MVHTHMAQTGFVPDIFIQNNLINMYVKCGSIHGAIKVFDEMPHSDVISWSTMIMGYAR 162


>XP_013585368.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial [Brassica oleracea var.
           oleracea] XP_013737791.1 PREDICTED: putative
           pentatricopeptide repeat-containing protein At3g13770,
           mitochondrial [Brassica napus]
          Length = 623

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   MHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV-N 184
           +H+H+I++ + P TYL+N LL  Y KC R+ DA KV DE+   NV SWT +IS Y++  +
Sbjct: 70  VHTHMIKTSYFPPTYLRNRLLIFYGKCDRLADAHKVLDEMPDKNVVSWTAMISRYSQTGH 129

Query: 185 PSQSLDLF 208
            S++L LF
Sbjct: 130 SSEALTLF 137


>KJB36078.1 hypothetical protein B456_006G139600 [Gossypium raimondii]
          Length = 624

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 31/68 (45%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   MHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYA-RVN 184
           +H+H+I++ ++P  YL+N L+ LY+KC R+++AR V DE+   +V SWT +ISAY+ R  
Sbjct: 92  VHAHMIKTRYLPPVYLRNRLIILYSKCDRLREARNVLDEMLEKDVVSWTAMISAYSQRGF 151

Query: 185 PSQSLDLF 208
            +++LDLF
Sbjct: 152 ATEALDLF 159


>XP_012485585.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial [Gossypium raimondii]
          Length = 646

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 31/68 (45%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   MHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYA-RVN 184
           +H+H+I++ ++P  YL+N L+ LY+KC R+++AR V DE+   +V SWT +ISAY+ R  
Sbjct: 92  VHAHMIKTRYLPPVYLRNRLIILYSKCDRLREARNVLDEMLEKDVVSWTAMISAYSQRGF 151

Query: 185 PSQSLDLF 208
            +++LDLF
Sbjct: 152 ATEALDLF 159


>XP_011085507.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
           [Sesamum indicum]
          Length = 697

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYARV 181
           K +H+HI +SG +P  ++ N +L LY KC+ + DA+ VFDE+   ++CSW  +IS YA++
Sbjct: 111 KRVHAHIKRSGFVPGIFISNKILDLYCKCESISDAQTVFDEMGEKDLCSWNILISGYAKM 170

Query: 182 N-PSQSLDLF 208
              S++ +LF
Sbjct: 171 GWVSEARNLF 180



 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   MHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYAR-VN 184
           +H H+ ++G  P ++  + L+ +Y KC  V+ A KVF  +  P++ SWT++I+ YA+   
Sbjct: 347 VHGHMTRTGFDPYSFAASALVHMYAKCGSVETAHKVFKWLPRPDLVSWTSLINGYAQNGQ 406

Query: 185 PSQSLDLF 208
           P ++L LF
Sbjct: 407 PHEALQLF 414


>XP_010278232.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
           [Nelumbo nucifera]
          Length = 713

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 27/57 (47%), Positives = 42/57 (73%)
 Frame = +2

Query: 8   MHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYAR 178
           +H+H   SG +P  ++ N LL LY+KC+ + DARK+FDE++  ++CSW T+IS YA+
Sbjct: 129 VHAHFKVSGFVPGIFISNRLLDLYSKCESLADARKLFDEMTERDLCSWNTMISGYAK 185



 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 20/59 (33%), Positives = 40/59 (67%)
 Frame = +2

Query: 2   KLMHSHIIQSGHIPDTYLQNILLSLYTKCQRVKDARKVFDEISHPNVCSWTTIISAYAR 178
           K +H+++ + G  P ++  + L+ +Y+KC  +  AR+VF+ +  P++ SWT++IS YA+
Sbjct: 361 KQVHAYMTRIGFDPFSFAASALVHMYSKCGNIDSARRVFEGMPQPDLVSWTSMISGYAQ 419