BLASTX nr result

ID: Ephedra29_contig00027899 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00027899
         (368 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008386462.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   2e-07
XP_009367606.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   2e-07

>XP_008386462.1 PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial [Malus domestica] XP_008350052.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g03100, mitochondrial-like [Malus domestica]
          Length = 782

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +2

Query: 32  YSQYYHSILTCHFKSGELDSAAGVILEMINRAKAAQKSFEEGTSVKDCTDKG 187
           Y Q+Y+ +LTCH K G+LDSA+ ++LEM+ +AKAA+ S    T V D   KG
Sbjct: 322 YRQFYNCLLTCHLKFGDLDSASNMVLEMLRKAKAARNSLAVATLVFDAAGKG 373


>XP_009367606.1 PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial [Pyrus x bretschneideri]
          Length = 785

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +2

Query: 32  YSQYYHSILTCHFKSGELDSAAGVILEMINRAKAAQKSFEEGTSVKDCTDKG 187
           Y Q+Y+ +LTCH K G+LDSA+ ++LEM+ +AKAA+ S    T V D   KG
Sbjct: 322 YRQFYNCLLTCHLKFGDLDSASNMVLEMLRKAKAARSSLAVATLVFDAAGKG 373


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