BLASTX nr result
ID: Ephedra29_contig00027739
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00027739
(306 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_008338226.1 PREDICTED: pentatricopeptide repeat-containing pr... 61 8e-09
XP_007203614.1 hypothetical protein PRUPE_ppa002292mg [Prunus pe... 60 2e-08
XP_009347240.1 PREDICTED: pentatricopeptide repeat-containing pr... 59 5e-08
XP_002324099.1 hypothetical protein POPTR_0017s12720g [Populus t... 59 7e-08
XP_010278232.1 PREDICTED: pentatricopeptide repeat-containing pr... 58 1e-07
AFG45729.1 hypothetical protein 0_12933_01, partial [Pinus taeda] 55 2e-07
AFG45724.1 hypothetical protein 0_12933_01, partial [Pinus taeda] 55 2e-07
AFG45722.1 hypothetical protein 0_12933_01, partial [Pinus taeda] 55 2e-07
AFG45721.1 hypothetical protein 0_12933_01, partial [Pinus taeda... 55 2e-07
AFG45720.1 hypothetical protein 0_12933_01, partial [Pinus taeda... 55 2e-07
XP_009348084.1 PREDICTED: pentatricopeptide repeat-containing pr... 57 2e-07
EEF40018.1 pentatricopeptide repeat-containing protein, putative... 56 5e-07
XP_015576723.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 5e-07
XP_015576722.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 5e-07
XP_011035853.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 5e-07
XP_006466653.1 PREDICTED: pentatricopeptide repeat-containing pr... 55 9e-07
XP_006425825.1 hypothetical protein CICLE_v10024955mg [Citrus cl... 55 9e-07
AEW07845.1 hypothetical protein 0_12933_01, partial [Pinus radiata] 54 1e-06
XP_016508786.1 PREDICTED: pentatricopeptide repeat-containing pr... 54 3e-06
XP_009800948.1 PREDICTED: pentatricopeptide repeat-containing pr... 54 3e-06
>XP_008338226.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Malus domestica]
Length = 692
Score = 61.2 bits (147), Expect = 8e-09
Identities = 33/65 (50%), Positives = 41/65 (63%)
Frame = -3
Query: 265 NIGKFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
N GKF + I ILC Q L +A+Q+LH D S S Y T+L LCL + AL QGK++HAH
Sbjct: 54 NDGKFKEAIDILCHQRRLSEAVQLLHHIDKPS-ASIYSTLLQLCLHQRALAQGKLVHAHT 112
Query: 85 IMRGF 71
GF
Sbjct: 113 RASGF 117
>XP_007203614.1 hypothetical protein PRUPE_ppa002292mg [Prunus persica] ONH96601.1
hypothetical protein PRUPE_7G139900 [Prunus persica]
Length = 691
Score = 60.1 bits (144), Expect = 2e-08
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = -3
Query: 259 GKFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHMIM 80
GKF + I ILC+Q L +AIQ+L+ D S S Y T+L LCL++ AL QGK++HAH +
Sbjct: 55 GKFKEAIDILCEQKHLAEAIQLLNRIDRPS-ASIYSTLLQLCLQQRALVQGKLVHAHTKV 113
Query: 79 RGFYNSYNGLLPILLNLYRDC 17
GF + L++LY C
Sbjct: 114 SGFVPGL-FICNRLIDLYAKC 133
>XP_009347240.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Pyrus x bretschneideri]
Length = 692
Score = 58.9 bits (141), Expect = 5e-08
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 265 NIGKFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
N GKF + I ILC Q L +A+Q+LH D S S Y T+L LCL + AL GK++HAH
Sbjct: 54 NDGKFKEAIDILCHQSRLSEAVQLLHHIDKPS-ASIYSTLLLLCLHQRALAHGKLVHAHT 112
Query: 85 IMRGF 71
GF
Sbjct: 113 RASGF 117
>XP_002324099.1 hypothetical protein POPTR_0017s12720g [Populus trichocarpa]
EEF04232.1 hypothetical protein POPTR_0017s12720g
[Populus trichocarpa]
Length = 676
Score = 58.5 bits (140), Expect = 7e-08
Identities = 33/85 (38%), Positives = 49/85 (57%)
Frame = -3
Query: 265 NIGKFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
N +F + I ILC+Q L++A+QILH D S S Y T++ C+K L QGK +H H+
Sbjct: 38 NHKRFDEAIHILCQQNRLKEALQILHQIDKPS-ASVYSTLIQSCIKSRLLQQGKKVHQHI 96
Query: 85 IMRGFYNSYNGLLPILLNLYRDCET 11
+ GF +L LL +Y C++
Sbjct: 97 KLSGFVPGL-FILNRLLEMYAKCDS 120
>XP_010278232.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Nelumbo nucifera]
Length = 713
Score = 58.2 bits (139), Expect = 1e-07
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = -3
Query: 256 KFIKQIRILCKQGSLEKAIQILHLQD---SCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
KF + I LC+Q L++AIQIL L D +C + Y +L LCL++ AL G+ +HAH
Sbjct: 74 KFKEAIDTLCQQKRLKEAIQILDLLDRSRTCPTAAIYSALLQLCLQQRALEDGRKVHAHF 133
Query: 85 IMRGFYNSYNGLLPILLNLYRDCET 11
+ GF + LL+LY CE+
Sbjct: 134 KVSGFVPGI-FISNRLLDLYSKCES 157
>AFG45729.1 hypothetical protein 0_12933_01, partial [Pinus taeda]
Length = 147
Score = 55.5 bits (132), Expect = 2e-07
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -3
Query: 241 IRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
I+ LCKQG L+ A+ L PS+Y +L C K+NALP+GK+IHAH+
Sbjct: 12 IKNLCKQGQLKDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHI 63
>AFG45724.1 hypothetical protein 0_12933_01, partial [Pinus taeda]
Length = 147
Score = 55.5 bits (132), Expect = 2e-07
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -3
Query: 241 IRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
I+ LCKQG L+ A+ L PS+Y +L C K+NALP+GK+IHAH+
Sbjct: 12 IKNLCKQGQLKDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHI 63
>AFG45722.1 hypothetical protein 0_12933_01, partial [Pinus taeda]
Length = 147
Score = 55.5 bits (132), Expect = 2e-07
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -3
Query: 241 IRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
I+ LCKQG L+ A+ L PS+Y +L C K+NALP+GK+IHAH+
Sbjct: 12 IKNLCKQGQLKDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHI 63
>AFG45721.1 hypothetical protein 0_12933_01, partial [Pinus taeda] AFG45726.1
hypothetical protein 0_12933_01, partial [Pinus taeda]
AFG45730.1 hypothetical protein 0_12933_01, partial
[Pinus taeda] AFG45731.1 hypothetical protein
0_12933_01, partial [Pinus taeda] AFG45732.1
hypothetical protein 0_12933_01, partial [Pinus taeda]
AFG45734.1 hypothetical protein 0_12933_01, partial
[Pinus taeda] AFG45735.1 hypothetical protein
0_12933_01, partial [Pinus taeda]
Length = 147
Score = 55.5 bits (132), Expect = 2e-07
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -3
Query: 241 IRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
I+ LCKQG L+ A+ L PS+Y +L C K+NALP+GK+IHAH+
Sbjct: 12 IKNLCKQGQLKDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHI 63
>AFG45720.1 hypothetical protein 0_12933_01, partial [Pinus taeda] AFG45723.1
hypothetical protein 0_12933_01, partial [Pinus taeda]
AFG45725.1 hypothetical protein 0_12933_01, partial
[Pinus taeda] AFG45727.1 hypothetical protein
0_12933_01, partial [Pinus taeda] AFG45728.1
hypothetical protein 0_12933_01, partial [Pinus taeda]
AFG45733.1 hypothetical protein 0_12933_01, partial
[Pinus taeda]
Length = 147
Score = 55.5 bits (132), Expect = 2e-07
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -3
Query: 241 IRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
I+ LCKQG L+ A+ L PS+Y +L C K+NALP+GK+IHAH+
Sbjct: 12 IKNLCKQGQLKDAVHALQQTSIPIKPSTYAYLLQSCTKKNALPEGKLIHAHI 63
>XP_009348084.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Pyrus x bretschneideri]
Length = 692
Score = 57.4 bits (137), Expect = 2e-07
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = -3
Query: 265 NIGKFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
N GKF + I ILC Q L +A+Q+LH D S S Y T+L LC + AL QGK++HAH
Sbjct: 54 NDGKFKEAIDILCHQKRLSEAVQLLHHIDKPS-ASIYSTLLLLCHHQRALAQGKLVHAHT 112
Query: 85 IMRGF 71
GF
Sbjct: 113 RASGF 117
>EEF40018.1 pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 56.2 bits (134), Expect = 5e-07
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = -3
Query: 265 NIGKFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
N G+F + I +LC+Q L++AIQ+L+ D S PS Y +++ CLK AL GK +H H+
Sbjct: 48 NEGRFKEAIALLCEQNRLKEAIQVLNQIDRPS-PSIYSSLIQSCLKNRALEVGKKVHDHI 106
Query: 85 IMRGFYNSYNGLLPILLNLYRDC 17
+ GF + LL++Y C
Sbjct: 107 KLSGFIPGL-VISNRLLDMYAKC 128
>XP_015576723.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
isoform X2 [Ricinus communis]
Length = 637
Score = 56.2 bits (134), Expect = 5e-07
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = -3
Query: 265 NIGKFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
N G+F + I +LC+Q L++AIQ+L+ D S PS Y +++ CLK AL GK +H H+
Sbjct: 48 NEGRFKEAIALLCEQNRLKEAIQVLNQIDRPS-PSIYSSLIQSCLKNRALEVGKKVHDHI 106
Query: 85 IMRGFYNSYNGLLPILLNLYRDC 17
+ GF + LL++Y C
Sbjct: 107 KLSGFIPGL-VISNRLLDMYAKC 128
>XP_015576722.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
isoform X1 [Ricinus communis]
Length = 686
Score = 56.2 bits (134), Expect = 5e-07
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = -3
Query: 265 NIGKFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
N G+F + I +LC+Q L++AIQ+L+ D S PS Y +++ CLK AL GK +H H+
Sbjct: 48 NEGRFKEAIALLCEQNRLKEAIQVLNQIDRPS-PSIYSSLIQSCLKNRALEVGKKVHDHI 106
Query: 85 IMRGFYNSYNGLLPILLNLYRDC 17
+ GF + LL++Y C
Sbjct: 107 KLSGFIPGL-VISNRLLDMYAKC 128
>XP_011035853.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Populus euphratica]
Length = 695
Score = 56.2 bits (134), Expect = 5e-07
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = -3
Query: 256 KFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHMIMR 77
+F + I ILC+Q L++A+ ILH D S S Y T++ C+K L QGK +H H+ +
Sbjct: 60 RFDEAIHILCQQNRLKEALHILHQIDKPS-ASVYSTLIQSCIKSRLLQQGKKVHQHIKLS 118
Query: 76 GFYNSYNGLLPILLNLYRDCET 11
GF +L LL +Y C++
Sbjct: 119 GFVPGL-FILNRLLEMYAKCDS 139
>XP_006466653.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Citrus sinensis]
Length = 695
Score = 55.5 bits (132), Expect = 9e-07
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = -3
Query: 256 KFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHMIMR 77
KF + I ILC Q L++A+QILH Q S +PS Y +++ C + AL +GK +H+H+
Sbjct: 60 KFKEAIDILCNQKRLKEALQILH-QISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSS 118
Query: 76 GFYNSYNGLLPILLNLYRDC 17
GF + LL++Y C
Sbjct: 119 GFKPGV-FISNCLLDMYAKC 137
>XP_006425825.1 hypothetical protein CICLE_v10024955mg [Citrus clementina]
ESR39065.1 hypothetical protein CICLE_v10024955mg
[Citrus clementina]
Length = 759
Score = 55.5 bits (132), Expect = 9e-07
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = -3
Query: 256 KFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHMIMR 77
KF + I ILC Q L++A+QILH Q S +PS Y +++ C + AL +GK +H+H+
Sbjct: 124 KFKEAIDILCNQKRLKEALQILH-QISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSS 182
Query: 76 GFYNSYNGLLPILLNLYRDC 17
GF + LL++Y C
Sbjct: 183 GFKPGV-FISNCLLDMYAKC 201
>AEW07845.1 hypothetical protein 0_12933_01, partial [Pinus radiata]
Length = 147
Score = 53.5 bits (127), Expect = 1e-06
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = -3
Query: 241 IRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNALPQGKMIHAHM 86
I+ LC QG L+ A+ L PS+Y +L C K+NALP+GK+IHAH+
Sbjct: 12 IKNLCNQGQLKDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHI 63
>XP_016508786.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Nicotiana tabacum]
Length = 696
Score = 53.9 bits (128), Expect = 3e-06
Identities = 32/95 (33%), Positives = 55/95 (57%)
Frame = -3
Query: 298 KYQVGKKLNYDNIGKFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNA 119
K Q+ K+L +N KF + ++ILC+Q L++AIQ+L ++ + +++ T+L +C + A
Sbjct: 48 KDQLIKRLCKEN--KFNEALQILCEQRRLKEAIQLLERHETRPSATAFSTLLRMCTENGA 105
Query: 118 LPQGKMIHAHMIMRGFYNSYNGLLPILLNLYRDCE 14
L +GK +H M GF L +LN Y C+
Sbjct: 106 LDEGKRVHRSMKCSGFRPGV-VLSNRILNFYCKCD 139
>XP_009800948.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Nicotiana sylvestris]
Length = 696
Score = 53.9 bits (128), Expect = 3e-06
Identities = 32/95 (33%), Positives = 55/95 (57%)
Frame = -3
Query: 298 KYQVGKKLNYDNIGKFIKQIRILCKQGSLEKAIQILHLQDSCSNPSSYKTILNLCLKRNA 119
K Q+ K+L +N KF + ++ILC+Q L++AIQ+L ++ + +++ T+L +C + A
Sbjct: 48 KDQLIKRLCKEN--KFNEALQILCEQRRLKEAIQLLERHETRPSATAFSTLLRMCTENGA 105
Query: 118 LPQGKMIHAHMIMRGFYNSYNGLLPILLNLYRDCE 14
L +GK +H M GF L +LN Y C+
Sbjct: 106 LDEGKRVHRSMKCSGFRPGV-VLSNRILNFYCKCD 139