BLASTX nr result
ID: Ephedra29_contig00027484
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00027484
(330 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KDP25801.1 hypothetical protein JCGZ_22523 [Jatropha curcas] 71 4e-12
XP_012086430.1 PREDICTED: putative pentatricopeptide repeat-cont... 71 5e-12
OAY60538.1 hypothetical protein MANES_01G119900 [Manihot esculenta] 68 4e-11
XP_010684672.1 PREDICTED: pentatricopeptide repeat-containing pr... 67 1e-10
XP_004298606.1 PREDICTED: pentatricopeptide repeat-containing pr... 67 1e-10
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 67 1e-10
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ... 67 1e-10
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 67 1e-10
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 67 1e-10
XP_008229438.2 PREDICTED: LOW QUALITY PROTEIN: putative pentatri... 65 4e-10
XP_006377412.1 pentatricopeptide repeat-containing family protei... 65 5e-10
ACU25576.1 pentatricopeptide repeat-containing protein, partial ... 65 6e-10
EEE51204.1 hypothetical protein OsJ_32019 [Oryza sativa Japonica... 65 7e-10
XP_018837357.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 7e-10
XP_004978079.1 PREDICTED: pentatricopeptide repeat-containing pr... 64 9e-10
XP_008655975.1 PREDICTED: pentatricopeptide repeat-containing pr... 64 9e-10
XP_002884639.1 predicted protein [Arabidopsis lyrata subsp. lyra... 64 9e-10
AFV61035.1 pentatricopeptide repeat-containing protein 11, parti... 64 1e-09
XP_007217406.1 hypothetical protein PRUPE_ppa024153mg [Prunus pe... 64 1e-09
OAY72407.1 Pentatricopeptide repeat-containing protein [Ananas c... 64 1e-09
>KDP25801.1 hypothetical protein JCGZ_22523 [Jatropha curcas]
Length = 393
Score = 70.9 bits (172), Expect = 4e-12
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCKVG EA ++ EV K + PD Y L+ GY E +++ +RKV+++
Sbjct: 176 LCKVGDFEEARKLVDEVHKRRMKPDKITYTILIDGYCKEGDLESALEIRKVMLKEGIELD 235
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
+ AL+ LC+ GK DA K L M +GLK D M+ + +++ +C KG
Sbjct: 236 NVAFTALISGLCKEGKINDAEKTLREMLKAGLKPDDMTYTMVMDGYCKKG 285
>XP_012086430.1 PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Jatropha curcas]
Length = 595
Score = 70.9 bits (172), Expect = 5e-12
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCKVG EA ++ EV K + PD Y L+ GY E +++ +RKV+++
Sbjct: 378 LCKVGDFEEARKLVDEVHKRRMKPDKITYTILIDGYCKEGDLESALEIRKVMLKEGIELD 437
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
+ AL+ LC+ GK DA K L M +GLK D M+ + +++ +C KG
Sbjct: 438 NVAFTALISGLCKEGKINDAEKTLREMLKAGLKPDDMTYTMVMDGYCKKG 487
>OAY60538.1 hypothetical protein MANES_01G119900 [Manihot esculenta]
Length = 598
Score = 68.2 bits (165), Expect = 4e-11
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK+G E ++ E+ K G+TPD Y L+ GY E +++ +RK +
Sbjct: 381 LCKIGDFREVKKLVDEINKRGITPDKVTYTTLIDGYCKEGDLESALEIRKKMFEEGIELD 440
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
+ AL+ LC+ GK DA + L M SGL+ D + + I++ FC KG
Sbjct: 441 NVAFTALISGLCKEGKVIDAERTLREMLKSGLRPDDATYTMIMDGFCKKG 490
Score = 54.3 bits (129), Expect = 3e-06
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Frame = -2
Query: 323 CKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVG------YVTESEVKDEDSLRKVLMRR 162
CK GR AM Q++LK+GL PD+ Y L+ G + ++ DE + R + +
Sbjct: 347 CKSGRIDLAMETYQQMLKKGLKPDLVLYNTLLNGLCKIGDFREVKKLVDEINKRGITPDK 406
Query: 161 RDYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ C+ G E A++ + M G++LD+++ + +I C +G
Sbjct: 407 VTYTTLIDGYCKEGDLESALEIRKKMFEEGIELDNVAFTALISGLCKEG 455
>XP_010684672.1 PREDICTED: pentatricopeptide repeat-containing protein At4g20090
[Beta vulgaris subsp. vulgaris] XP_010684673.1
PREDICTED: pentatricopeptide repeat-containing protein
At4g20090 [Beta vulgaris subsp. vulgaris] XP_019106417.1
PREDICTED: pentatricopeptide repeat-containing protein
At4g20090 [Beta vulgaris subsp. vulgaris] KMT05899.1
hypothetical protein BVRB_7g165570 [Beta vulgaris subsp.
vulgaris]
Length = 653
Score = 67.0 bits (162), Expect = 1e-10
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTES----------EVKDEDSLRK 177
LC+VGR +A +L E++ +GLTP+ Y L+ GY E++ +S+
Sbjct: 401 LCRVGRPNDAKEVLLEMVHKGLTPNAFTYSSLIKGYFRTGNSQEALRAWKEIEGSNSIHN 460
Query: 176 VLMRRRDYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKGMPKE 3
V+ Y L+ LCE GK +DA+ M GL+ D+++ S +I FC G+P++
Sbjct: 461 VVC----YSVLINGLCEEGKLKDAMAVWSQMLGRGLEPDTIAYSSLIHGFCKAGLPEQ 514
>XP_004298606.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial [Fragaria vesca subsp. vesca]
Length = 746
Score = 67.0 bits (162), Expect = 1e-10
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVK------DEDSLRKVLMR 165
LCK G+ +EA IL+E+L G+ PD Y L+ G+ V DE +RKV+
Sbjct: 331 LCKTGKLSEAEMILREMLVLGVLPDYVIYTTLIDGFCKSGNVPAAWRLFDEMRVRKVIPD 390
Query: 164 RRDYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKGMPKE 3
Y A++ C+ GK DA K M GL+ D ++ + +I+ +C G KE
Sbjct: 391 FITYTAIIHGFCQTGKMMDADKLFHEMVSKGLEPDEVTYTSLIDGYCKAGQMKE 444
>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
Length = 460
Score = 66.6 bits (161), Expect = 1e-10
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 306 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 365
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFC 24
Y L+ LC+AGK ++A+K E M G+K D ++ R++ES+C
Sbjct: 366 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYC 412
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 61 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 120
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 121 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 170
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 96 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 155
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 156 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAG 205
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 191 VVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAG 240
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 236 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 295
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 296 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 345
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 271 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 330
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 331 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 380
Score = 61.6 bits (148), Expect = 8e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 166 LCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 225
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 226 VVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 275
Score = 61.6 bits (148), Expect = 8e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 201 LCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 260
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 261 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 310
Score = 53.9 bits (128), Expect = 4e-06
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = -2
Query: 329 ALCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR--- 159
AL + GR A+ + E+ ++G+ P V Y L+ G ++ + L + ++ +
Sbjct: 25 ALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 84
Query: 158 ---DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 85 DVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 135
>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
Length = 460
Score = 66.6 bits (161), Expect = 1e-10
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 306 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 365
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFC 24
Y L+ LC+AGK ++A+K E M G+K D ++ R++ES+C
Sbjct: 366 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYC 412
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 61 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 120
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 121 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 170
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 96 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 155
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 156 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 205
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 271 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 330
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 331 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 380
Score = 59.7 bits (143), Expect = 4e-08
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K ++ + +I+ C G
Sbjct: 191 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAG 240
Score = 59.7 bits (143), Expect = 4e-08
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ P V Y L+ G ++ + L + ++ +
Sbjct: 201 LCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPS 260
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 261 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 310
Score = 59.7 bits (143), Expect = 4e-08
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ P V Y L+ G ++ + L + ++ +
Sbjct: 236 LCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 295
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 296 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 345
Score = 53.9 bits (128), Expect = 4e-06
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = -2
Query: 329 ALCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR--- 159
AL + GR A+ + E+ ++G+ P V Y L+ G ++ + L + ++ +
Sbjct: 25 ALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 84
Query: 158 ---DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 85 DVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 135
>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U10 In Complex With Its Target Rna U10
Length = 460
Score = 66.6 bits (161), Expect = 1e-10
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 306 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 365
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFC 24
Y L+ LC+AGK ++A+K E M G+K D ++ R++ES+C
Sbjct: 366 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYC 412
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 61 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 120
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 121 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 170
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 96 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 155
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 156 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 205
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 191 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 240
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 166 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 225
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 226 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 275
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 201 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 260
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 261 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 310
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 236 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 295
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 296 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 345
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 271 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 330
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 331 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 380
Score = 53.9 bits (128), Expect = 4e-06
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = -2
Query: 329 ALCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR--- 159
AL + GR A+ + E+ ++G+ P V Y L+ G ++ + L + ++ +
Sbjct: 25 ALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 84
Query: 158 ---DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 85 DVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 135
>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
Length = 460
Score = 66.6 bits (161), Expect = 1e-10
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 306 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 365
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFC 24
Y L+ LC+AGK ++A+K E M G+K D ++ R++ES+C
Sbjct: 366 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYC 412
Score = 63.2 bits (152), Expect = 2e-09
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 96 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 155
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ S +I+ C G
Sbjct: 156 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAG 205
Score = 62.0 bits (149), Expect = 6e-09
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 271 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 330
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 331 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 380
Score = 61.2 bits (147), Expect = 1e-08
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ PDV Y L+ G ++ + L + ++ +
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K + ++ S +I+ C G
Sbjct: 191 VVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAG 240
Score = 60.1 bits (144), Expect = 3e-08
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ P+V Y L+ G ++ + L + ++ +
Sbjct: 236 LCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 295
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 296 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 345
Score = 59.7 bits (143), Expect = 4e-08
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G+ EA+ + +E++++G+ P+V Y L+ G ++ + L + ++ +
Sbjct: 201 LCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPN 260
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 261 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 310
Score = 53.9 bits (128), Expect = 4e-06
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = -2
Query: 329 ALCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR--- 159
AL + GR A+ + E+ ++G+ P V Y L+ G ++ + L + ++ +
Sbjct: 25 ALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 84
Query: 158 ---DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y L+ LC+AGK ++A+K E M G+K D ++ + +I+ C G
Sbjct: 85 DVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 135
>XP_008229438.2 PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680 [Prunus mume]
Length = 592
Score = 65.5 bits (158), Expect = 4e-10
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCKVG E +++E+ EGL PD Y L+ G E +++ +RK ++++
Sbjct: 375 LCKVGDLKETRKLVEEMNIEGLKPDTITYTTLIDGCCKEGDLQSALEIRKGMIKQGIELD 434
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
+ AL+ LC GK DA + L M SG+K D + + II+ FC KG
Sbjct: 435 NVAFTALISGLCREGKTLDAERTLREMLNSGMKPDDATYTMIIDGFCKKG 484
>XP_006377412.1 pentatricopeptide repeat-containing family protein [Populus
trichocarpa] ERP55209.1 pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 478
Score = 65.1 bits (157), Expect = 5e-10
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRRD--- 156
LC+ G EAMG+ ++ K+ + P+V Y L+ G + L ++++R+R
Sbjct: 236 LCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPN 295
Query: 155 ---YYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCN 21
Y L+ LC+ GK +AV+ L+ MK+ GLK D+ +II FCN
Sbjct: 296 MVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCN 343
>ACU25576.1 pentatricopeptide repeat-containing protein, partial [Junellia
spathulata]
Length = 418
Score = 64.7 bits (156), Expect = 6e-10
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G +A ++ E+ +GL PD Y L+ G E +++ RK++++
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLD 345
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y AL+ LC+ G+ DA K L M GLKL+ + + II FC KG
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKG 395
>EEE51204.1 hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 64.7 bits (156), Expect = 7e-10
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMR---RRD 156
LCK GRS EA I + K GL PD++ YR L+ G+ E V + + L +++R + D
Sbjct: 289 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPD 348
Query: 155 ---YYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFC 24
Y L+ C AGK ++A K L M G+K D ++ +I +C
Sbjct: 349 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 395
>XP_018837357.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial [Juglans regia] XP_018837358.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g05670,
mitochondrial [Juglans regia] XP_018837359.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g05670,
mitochondrial [Juglans regia] XP_018837360.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g05670,
mitochondrial [Juglans regia]
Length = 751
Score = 64.7 bits (156), Expect = 7e-10
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVK------DEDSLRKVLMR 165
LCK G+ EA + +E++K+G+ PD Y LV G+ V+ DE RK++
Sbjct: 336 LCKTGKLVEAEEVFREMIKQGIVPDNVVYTTLVSGFCKLGNVRTAYRLFDEMRTRKIIPD 395
Query: 164 RRDYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKGMPKE 3
Y A++ C GK +AVK M G + D ++ + +I+ +C G KE
Sbjct: 396 SITYTAIIHGFCLTGKIMEAVKLFREMISRGFEPDEVTYTTLIDGYCKAGEMKE 449
Score = 55.1 bits (131), Expect = 2e-06
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Frame = -2
Query: 323 CKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR----- 159
C G+ EA+ + +E++ G PD Y L+ GY E+K+ L +++R
Sbjct: 407 CLTGKIMEAVKLFREMISRGFEPDEVTYTTLIDGYCKAGEMKEAFDLHNQMVQRGLTPNI 466
Query: 158 -DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y AL LC+ G+ + A + L M GL+L+ + + II C G
Sbjct: 467 VTYTALADGLCKRGELDTANELLHEMSGKGLQLNIYTYNSIINGLCKAG 515
Score = 54.7 bits (130), Expect = 2e-06
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Frame = -2
Query: 323 CKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYV------TESEVKDEDSLRKVLMRR 162
CK G EA + ++++ GLTP++ Y L G T +E+ E S + + +
Sbjct: 442 CKAGEMKEAFDLHNQMVQRGLTPNIVTYTALADGLCKRGELDTANELLHEMSGKGLQLNI 501
Query: 161 RDYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y +++ LC+AG AV ++ M+V+G D+ + + +++++C G
Sbjct: 502 YTYNSIINGLCKAGNLAQAVNLMKEMEVAGFHPDTFTFTTLMDTYCKMG 550
>XP_004978079.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Setaria italica]
Length = 524
Score = 64.3 bits (155), Expect = 9e-10
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRR----- 162
LC +GR EA GI+ ++ KEG+ PD+ Y L+ GY + ++KD +R +M +
Sbjct: 404 LCLLGRLDEARGIIDKMTKEGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMNKGFNPT 463
Query: 161 -RDYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIE 33
Y AL+Q LC+ G+ +DA ++ M G+ D + +IE
Sbjct: 464 LLTYNALIQGLCKNGQGDDAENLMKEMVEKGITPDDSTYISLIE 507
>XP_008655975.1 PREDICTED: pentatricopeptide repeat-containing protein At5g40400
[Zea mays] AQK91807.1 Pentatricopeptide
repeat-containing protein [Zea mays]
Length = 573
Score = 64.3 bits (155), Expect = 9e-10
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Frame = -2
Query: 329 ALCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR--- 159
ALC+ + A G L+E+ ++G PDV Y L+ GY + ++D L V+ RR
Sbjct: 217 ALCRGEDAERAYGFLEELEEQGFEPDVVTYNTLLAGYCRKGRLQDALHLFDVMPHRRVPP 276
Query: 158 ---DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKGMPKE 3
+ L+ LC+A + +DA + + M GL+ D+++ S +I +CN+G KE
Sbjct: 277 DLVSHTILMDGLCKAWRLKDARRMFDRMVHGGLRPDAVAYSVLITGYCNEGQLKE 331
>XP_002884639.1 predicted protein [Arabidopsis lyrata subsp. lyrata] EFH60898.1
predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 64.3 bits (155), Expect = 9e-10
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRR----- 162
LC+ G+ EA G+ ++++K+G+ P V Y L+ GY + V L V+ +R
Sbjct: 346 LCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Query: 161 -RDYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
R + L++ LC GKP AV L+ M +GL D +S + +I+ C +G
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
>AFV61035.1 pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 63.9 bits (154), Expect = 1e-09
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCK G +A G++ E+ +GL PD Y L+ G E ++ RK +++
Sbjct: 274 LCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLD 333
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y A++ LC+ G+P DA K L M GLK D+ + + II FC KG
Sbjct: 334 DVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 383
Score = 55.8 bits (133), Expect = 8e-07
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Frame = -2
Query: 323 CKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVK------DEDSLRKVLMRR 162
CK GR AM I +++L + L PD+ Y L+ G + ++ DE S++ + +
Sbjct: 240 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDK 299
Query: 161 RDYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKGMP 9
Y L+ C+ G + A +H + M ++LD ++ + II C +G P
Sbjct: 300 FTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRP 350
>XP_007217406.1 hypothetical protein PRUPE_ppa024153mg [Prunus persica] ONI17539.1
hypothetical protein PRUPE_3G166000 [Prunus persica]
Length = 605
Score = 63.9 bits (154), Expect = 1e-09
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LCKVG EA +++E+ GL PD Y L+ G E ++ +RK ++++
Sbjct: 388 LCKVGDLKEARKLVEEMNIAGLKPDTITYTTLIDGCCKEGNLQSALEIRKGMIKQGIELD 447
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
+ AL+ LC GK DA + L M SG+K D + + II+ FC KG
Sbjct: 448 NVAFTALISGLCREGKTLDAERTLREMLNSGMKPDDATYTMIIDGFCKKG 497
>OAY72407.1 Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 738
Score = 63.9 bits (154), Expect = 1e-09
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Frame = -2
Query: 326 LCKVGRSAEAMGILQEVLKEGLTPDVSFYRELVVGYVTESEVKDEDSLRKVLMRRR---- 159
LC+ G E + E++KEGL PD Y LV GY E +V L + ++
Sbjct: 277 LCRKGLVRETHKVFDEMVKEGLAPDAVTYNTLVNGYCREGDVHQALVLHAEMAQKGVNPN 336
Query: 158 --DYYALVQDLCEAGKPEDAVKHLEHMKVSGLKLDSMSSSRIIESFCNKG 15
Y +L+ +C+AG E A++ M+ GL+L+ ++ + +I+ FC KG
Sbjct: 337 VVTYTSLISAMCKAGNLERAMEFATQMRGRGLRLNEITFTTLIDGFCKKG 386