BLASTX nr result

ID: Ephedra29_contig00027105 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00027105
         (358 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008445872.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   9e-09
XP_004143696.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   2e-08
XP_010525822.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   4e-08
XP_010525817.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   4e-08
XP_017978951.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   1e-07
XP_018499512.1 PREDICTED: putative pentatricopeptide repeat-cont...    59   1e-07
XP_002321748.2 pentatricopeptide repeat-containing family protei...    59   1e-07
XP_011040265.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   2e-07
XP_011040263.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   2e-07
XP_010520854.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   2e-07
XP_019058137.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide...    58   3e-07
XP_018732863.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   4e-07
KVI08472.1 Pentatricopeptide repeat-containing protein [Cynara c...    57   5e-07
KCW48513.1 hypothetical protein EUGRSUZ_K02196 [Eucalyptus grandis]    57   7e-07
XP_006836820.1 PREDICTED: putative pentatricopeptide repeat-cont...    57   7e-07
XP_010036852.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   7e-07
XP_006828912.1 PREDICTED: putative pentatricopeptide repeat-cont...    56   9e-07
XP_010527630.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   1e-06
XP_019056241.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   1e-06
EEE67792.1 hypothetical protein OsJ_25528 [Oryza sativa Japonica...    55   2e-06

>XP_008445872.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial [Cucumis melo] XP_008445873.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial [Cucumis melo] XP_008445874.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial [Cucumis melo] XP_008445875.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial [Cucumis melo]
          Length = 1033

 Score = 62.0 bits (149), Expect = 9e-09
 Identities = 29/68 (42%), Positives = 47/68 (69%)
 Frame = +2

Query: 14  RDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVEE 193
           +DL+ N +TYS ++ G+C  GNL +A + F+EM  KG  PD  I+ +L+DG  K+GN+E+
Sbjct: 726 KDLVPNVVTYSTIVDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK 785

Query: 194 SNMIQNEA 217
           +  + +EA
Sbjct: 786 ALSLFHEA 793


>XP_004143696.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial [Cucumis sativus] XP_011654904.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial [Cucumis sativus] KGN50452.1
           hypothetical protein Csa_5G175760 [Cucumis sativus]
          Length = 1032

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 29/69 (42%), Positives = 48/69 (69%)
 Frame = +2

Query: 11  KRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVE 190
           ++DL+ + +TYS +I G+C  GNL +A + F+EM  KG  PD  I+ +L+DG  K+GN+E
Sbjct: 724 EKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 783

Query: 191 ESNMIQNEA 217
           ++  + +EA
Sbjct: 784 KALSLFHEA 792


>XP_010525822.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like isoform X3 [Tarenaya hassleriana]
          Length = 492

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +2

Query: 5   VIKRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGN 184
           + +R ++ N+I Y+ LI G C  GNL  A   F EM+++G HPD   H +L+DGL K G 
Sbjct: 285 MFQRGVVANNIIYNSLIQGSCQAGNLDAAQTLFFEMQRRGPHPDLITHKILLDGLCKNGK 344

Query: 185 VEESNMIQNE 214
           +EE+  + N+
Sbjct: 345 LEEAMELCNK 354


>XP_010525817.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like isoform X1 [Tarenaya hassleriana]
           XP_010525818.1 PREDICTED: pentatricopeptide
           repeat-containing protein At3g22470, mitochondrial-like
           isoform X1 [Tarenaya hassleriana] XP_010525820.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial-like isoform X1 [Tarenaya
           hassleriana]
          Length = 637

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +2

Query: 5   VIKRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGN 184
           + +R ++ N+I Y+ LI G C  GNL  A   F EM+++G HPD   H +L+DGL K G 
Sbjct: 430 MFQRGVVANNIIYNSLIQGSCQAGNLDAAQTLFFEMQRRGPHPDLITHKILLDGLCKNGK 489

Query: 185 VEESNMIQNE 214
           +EE+  + N+
Sbjct: 490 LEEAMELCNK 499


>XP_017978951.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19890
           [Theobroma cacao]
          Length = 692

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 29/75 (38%), Positives = 47/75 (62%)
 Frame = +2

Query: 11  KRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVE 190
           ++ L+ N  TY+ LI GHC VGN  +A  + + M K+G+ P+ C +  ++DGL K+G VE
Sbjct: 377 EQGLVPNTNTYTTLIDGHCKVGNFERAYEFMDVMDKEGFAPNICTYNAIIDGLCKKGRVE 436

Query: 191 ESNMIQNEACLQ*LQ 235
           E++ +  +  L  LQ
Sbjct: 437 EAHELLRDGLLHGLQ 451


>XP_018499512.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290 [Pyrus x bretschneideri]
          Length = 893

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 25/62 (40%), Positives = 43/62 (69%)
 Frame = +2

Query: 11  KRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVE 190
           ++ L+ N +TY+ +I G+C +GN  +A +++NEM ++G  P    +  L++GL KQGN+E
Sbjct: 805 RKKLVPNAVTYNIMIGGYCRIGNTVEAFKFWNEMIRQGIAPSVITYSALINGLYKQGNLE 864

Query: 191 ES 196
           ES
Sbjct: 865 ES 866


>XP_002321748.2 pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] EEF05875.2 pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 1026

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 27/61 (44%), Positives = 41/61 (67%)
 Frame = +2

Query: 14  RDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVEE 193
           + L  N +TY+ +I G+C  GNL++A R F+EM  KG  PD  ++  L+DG RK+GN E+
Sbjct: 705 KGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEK 764

Query: 194 S 196
           +
Sbjct: 765 A 765


>XP_011040265.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial isoform X2 [Populus euphratica]
          Length = 803

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = +2

Query: 14  RDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVEE 193
           + L  N +TY+ +I G+C  GNL+ A R F+EM  KG  PD  ++  L+DG RK+GN E+
Sbjct: 482 KGLAHNAVTYATIIDGYCKSGNLSNAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEK 541

Query: 194 S 196
           +
Sbjct: 542 A 542


>XP_011040263.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial isoform X1 [Populus euphratica]
           XP_011040264.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g61990, mitochondrial
           isoform X1 [Populus euphratica]
          Length = 1041

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = +2

Query: 14  RDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVEE 193
           + L  N +TY+ +I G+C  GNL+ A R F+EM  KG  PD  ++  L+DG RK+GN E+
Sbjct: 720 KGLAHNAVTYATIIDGYCKSGNLSNAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEK 779

Query: 194 S 196
           +
Sbjct: 780 A 780


>XP_010520854.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like isoform X2 [Tarenaya hassleriana]
          Length = 638

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 27/62 (43%), Positives = 39/62 (62%)
 Frame = +2

Query: 11  KRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVE 190
           +R +  N+I Y+ LI G C  GN+  A   F EM+++G HPD   H +L+DGL K G +E
Sbjct: 433 QRGVTANNIIYNSLIQGFCQAGNIDAAQTLFFEMQRRGPHPDLITHTILLDGLCKNGKLE 492

Query: 191 ES 196
           E+
Sbjct: 493 EA 494


>XP_019058137.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At5g14770, mitochondrial-like [Tarenaya
            hassleriana]
          Length = 1300

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = +2

Query: 11   KRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVE 190
            ++ L+ N+I Y+ LI G C  GN+  A   F EM+++G HPD   H +L+DGL K G +E
Sbjct: 1098 RKGLVANNIIYNSLIRGSCQAGNIDAAQTLFFEMQRRGPHPDLGTHKILLDGLCKNGKLE 1157

Query: 191  ES 196
            E+
Sbjct: 1158 EA 1159


>XP_018732863.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Eucalyptus grandis]
          Length = 223

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 27/67 (40%), Positives = 40/67 (59%)
 Frame = +2

Query: 14  RDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVEE 193
           R L  N +TY  +I GHC  GNL++A   F+EM      PD  ++  L+DG  K+GNVE+
Sbjct: 129 RGLAPNRVTYPTIIDGHCKSGNLSEAFHLFDEMLSMAVQPDSFVYSALIDGCFKKGNVEK 188

Query: 194 SNMIQNE 214
           +  + N+
Sbjct: 189 ALSLFND 195


>KVI08472.1 Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 703

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 26/62 (41%), Positives = 42/62 (67%)
 Frame = +2

Query: 11  KRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVE 190
           ++ L+ N  TY+ LI+GHC  GNL++A    +EM K+G  P+ C H  ++DGL ++G V+
Sbjct: 388 EQGLVPNEDTYTTLISGHCKSGNLSRAYELMDEMSKEGSPPNMCSHNAIIDGLFRKGRVQ 447

Query: 191 ES 196
           E+
Sbjct: 448 EA 449


>KCW48513.1 hypothetical protein EUGRSUZ_K02196 [Eucalyptus grandis]
          Length = 914

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = +2

Query: 14  RDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVEE 193
           R L  N +TY+ +I G+C  GNL +A   F+EM   G  PD  ++  L+DG  K+GNVE+
Sbjct: 594 RGLAPNRVTYATIIDGYCKSGNLGEAFHLFDEMLSVGVQPDSFVYSALIDGCFKEGNVEK 653

Query: 194 SNMIQNE 214
           +  + N+
Sbjct: 654 ALSLFND 660


>XP_006836820.1 PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g74580 [Amborella trichopoda] ERM99673.1 hypothetical
            protein AMTR_s00099p00041040 [Amborella trichopoda]
          Length = 942

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 28/72 (38%), Positives = 44/72 (61%)
 Frame = +2

Query: 2    SVIKRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQG 181
            S I R LM + + Y  LI G+C  G LA+A   +N M   G  PD  I+ +L++GL ++G
Sbjct: 870  SSIDRGLMPDFVAYGILIQGYCDAGRLAEALLLYNSMMIDGVIPDRFIYKILIEGLHREG 929

Query: 182  NVEESNMIQNEA 217
             +EE+N + ++A
Sbjct: 930  RIEEANELIHKA 941


>XP_010036852.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial [Eucalyptus grandis] XP_010036853.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial [Eucalyptus grandis]
           XP_010036854.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g61990, mitochondrial
           [Eucalyptus grandis] XP_010036855.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial [Eucalyptus grandis] XP_010036856.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial [Eucalyptus grandis]
           XP_010036857.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g61990, mitochondrial
           [Eucalyptus grandis]
          Length = 1026

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = +2

Query: 14  RDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVEE 193
           R L  N +TY+ +I G+C  GNL +A   F+EM   G  PD  ++  L+DG  K+GNVE+
Sbjct: 706 RGLAPNRVTYATIIDGYCKSGNLGEAFHLFDEMLSVGVQPDSFVYSALIDGCFKEGNVEK 765

Query: 194 SNMIQNE 214
           +  + N+
Sbjct: 766 ALSLFND 772


>XP_006828912.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Amborella trichopoda] ERM96328.1 hypothetical
           protein AMTR_s00001p00203780 [Amborella trichopoda]
          Length = 583

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 27/70 (38%), Positives = 43/70 (61%)
 Frame = +2

Query: 5   VIKRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGN 184
           ++K+ L  + +TY+ LI GHC VG L +A   F E+RK G  PD   +  L+DG  K+G+
Sbjct: 347 MMKKGLKPDLVTYNSLIYGHCKVGELKEARELFFEIRKMGLRPDKITYTTLIDGFCKEGD 406

Query: 185 VEESNMIQNE 214
           ++ +  I+ E
Sbjct: 407 IKAAMEIRRE 416


>XP_010527630.1 PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Tarenaya hassleriana]
          Length = 419

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = +2

Query: 11  KRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVE 190
           +R L+ + ITY+ LI G   VGNL  A ++F EM+ KG  PD   + +L+DGL K G  +
Sbjct: 213 RRGLVADAITYNILIQGFYRVGNLGAAQKFFMEMQYKGHRPDLVTYIILLDGLCKNGKTD 272

Query: 191 ESNMIQNE 214
           ++  + N+
Sbjct: 273 KALCLYNK 280


>XP_019056241.1 PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Tarenaya hassleriana]
          Length = 545

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = +2

Query: 11  KRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGNVE 190
           +R L+ + ITY+ LI G   VGNL  A ++F EM+ KG  PD   + +L+DGL K G  +
Sbjct: 327 RRGLVADAITYNILIQGFYRVGNLGAAQKFFMEMQYKGHRPDLVTYIILLDGLCKNGKTD 386

Query: 191 ESNMIQNE 214
           ++  + N+
Sbjct: 387 KALCLYNK 394


>EEE67792.1 hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 24/70 (34%), Positives = 43/70 (61%)
 Frame = +2

Query: 5   VIKRDLMCNHITYSYLIAGHCTVGNLAQATRYFNEMRKKGWHPDPCIHFMLMDGLRKQGN 184
           +I++ +  NH++Y+ LI+ HC  G++ +A R F EM   G  P    + ++MDG  K+G+
Sbjct: 303 MIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGS 362

Query: 185 VEESNMIQNE 214
           + E+   +NE
Sbjct: 363 IREAERFKNE 372


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