BLASTX nr result

ID: Ephedra29_contig00027083 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00027083
         (524 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001762579.1 predicted protein [Physcomitrella patens] EDQ7270...   114   3e-26
GAQ79974.1 hypothetical protein KFL_000430160 [Klebsormidium fla...    74   5e-12

>XP_001762579.1 predicted protein [Physcomitrella patens] EDQ72702.1 predicted
            protein [Physcomitrella patens]
          Length = 1922

 Score =  114 bits (285), Expect = 3e-26
 Identities = 75/178 (42%), Positives = 99/178 (55%), Gaps = 9/178 (5%)
 Frame = +3

Query: 18   YVQNFCPLLREMRSLLSVVKKEEKLQRSQIY-------RNNTIRKITPVQSTKQGQAFHI 176
            Y+Q+ CPLL E+R +L   KK    QR   +       R  T+RKITPVQ     Q   I
Sbjct: 1045 YIQHCCPLLMELRGVLVEGKKRRLRQREPNWPESPGFARTRTVRKITPVQRPGPSQTLDI 1104

Query: 177  SNVVAEPSIMNV--AVEKENDELKLKLQNIFLDQRPHLQRLVDFLVDTVAVNAAHAATLK 350
            S+  A    +      E ++D+LKLKLQ  FL+QRP L+R+VDF+VDT A NAA AA LK
Sbjct: 1105 SSNSANGERITTEHGFESQDDQLKLKLQRTFLEQRPQLRRVVDFVVDTAAGNAARAAVLK 1164

Query: 351  YVPELLEEAKGKLEIAILERVPTLSGILKVEDFEAKLSDSNFEAAVEHIICTSIEKAL 524
             VP  L+ A+ KL++ +  +    S         +K   S  EAAVEHII T+I + L
Sbjct: 1165 LVPPALQSAQEKLQMVLRGKGADSSPASSPSWSNSK--GSQVEAAVEHIITTTIHQLL 1220


>GAQ79974.1 hypothetical protein KFL_000430160 [Klebsormidium flaccidum]
          Length = 1319

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 13/157 (8%)
 Frame = +3

Query: 18   YVQNFCPLLREMRSLLSVVKKEEKLQRSQI----------YRNNTIRKITPVQSTKQGQA 167
            Y+QN CPLL ++ + L     E + + SQI           R+  IRKITP    +  Q 
Sbjct: 1065 YIQNCCPLLDDLAATLL----EARQRTSQIDGPDAAKPGDRRSRPIRKITPTPPPQAAQP 1120

Query: 168  FHI-SNVVAEPSIMNVAVEK--ENDELKLKLQNIFLDQRPHLQRLVDFLVDTVAVNAAHA 338
              + ++V+A     +  + +  + D L+ KL+ +F +Q+P L+RLVDF+VDTVA N+A A
Sbjct: 1121 GGLPADVLAALPAEDAELVRPPQRDPLRTKLEGVFFEQQPQLRRLVDFVVDTVAANSALA 1180

Query: 339  ATLKYVPELLEEAKGKLEIAILERVPTLSGILKVEDF 449
            A L   P+++  A+ +L           +G+ +VE F
Sbjct: 1181 AQLATCPDVISAARAQLAERAERAASDGAGVGRVEMF 1217


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