BLASTX nr result
ID: Ephedra29_contig00026304
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00026304
(339 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011623466.1 PREDICTED: uncharacterized protein LOC18434520 [A... 91 2e-19
ABR17577.1 unknown [Picea sitchensis] 90 5e-19
XP_006401381.1 hypothetical protein EUTSA_v10013799mg [Eutrema s... 89 2e-18
XP_009380138.1 PREDICTED: uncharacterized protein LOC103968599 [... 88 3e-18
JAU38524.1 Cold shock protein 1 [Noccaea caerulescens] 88 3e-18
JAU77130.1 Cold shock protein 1 [Noccaea caerulescens] 88 4e-18
JAU03642.1 Cold shock protein 1 [Noccaea caerulescens] 88 4e-18
XP_010535814.1 PREDICTED: DNA topoisomerase 3-alpha [Tarenaya ha... 87 4e-18
XP_018452565.1 PREDICTED: DNA-binding protein HEXBP-like [Raphan... 88 4e-18
XP_009417060.1 PREDICTED: DNA-binding protein HEXBP-like isoform... 87 4e-18
JAU82338.1 Cold shock protein 1 [Noccaea caerulescens] 87 9e-18
XP_002264670.1 PREDICTED: cold shock protein 1 [Vitis vinifera] ... 86 1e-17
XP_018463196.1 PREDICTED: DNA-binding protein HEXBP-like [Raphan... 87 1e-17
OAP02671.1 hypothetical protein AXX17_AT3G35970 [Arabidopsis tha... 86 2e-17
JAT49308.1 Cellular nucleic acid-binding protein [Anthurium amni... 86 2e-17
NP_189872.1 zinc knuckle (CCHC-type) family protein [Arabidopsis... 86 2e-17
XP_013607174.1 PREDICTED: DNA-binding protein HEXBP [Brassica ol... 84 6e-17
ALN96984.1 cold shock domain-containing protein 3 [Populus tomen... 84 8e-17
XP_006292441.1 hypothetical protein CARUB_v10018659mg [Capsella ... 84 8e-17
XP_011468606.1 PREDICTED: cold shock domain-containing protein 3... 84 8e-17
>XP_011623466.1 PREDICTED: uncharacterized protein LOC18434520 [Amborella
trichopoda]
Length = 424
Score = 91.3 bits (225), Expect = 2e-19
Identities = 44/112 (39%), Positives = 61/112 (54%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
G C V ISKS++NPGR YY C + + CGF +WCD + S P+
Sbjct: 98 GPCPVSISKSRQNPGRKYYTCPMYQR---CGFFQWCD------------VPSLPQSG--- 139
Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKWL 339
M P+C C+ G C++ TSK ++ G +F+ CPIKKGQG+C + WL
Sbjct: 140 ----SMLKFPICGCRAGECKLFTSKTDKNPGRQFFVCPIKKGQGACNFFLWL 187
>ABR17577.1 unknown [Picea sitchensis]
Length = 374
Score = 90.1 bits (222), Expect = 5e-19
Identities = 43/111 (38%), Positives = 62/111 (55%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
G C V +S +++NPGR +Y C LR C F +WCD +G+ A G S D
Sbjct: 145 GPCLVLMSSTEKNPGRKFYKCPLREDGGRCNFFEWCDAAQGSSGAYG---GQARAFSADI 201
Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
+E +E + C C G C +LT+K E G +F+ CP+K+G+GSC + KW
Sbjct: 202 SEGSEPSMQ--CPCGAGLCPVLTAKTERNSGRQFFRCPLKEGEGSCRFFKW 250
>XP_006401381.1 hypothetical protein EUTSA_v10013799mg [Eutrema salsugineum]
ESQ42834.1 hypothetical protein EUTSA_v10013799mg
[Eutrema salsugineum]
Length = 384
Score = 88.6 bits (218), Expect = 2e-18
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCD--EDKGTFSAAKDSLGSTPKHSM 177
GVC + S +++NPGR +Y C R + CGF +WCD + GT S G+T +
Sbjct: 108 GVCLILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTQPGTHHSYGNTNESKF 167
Query: 178 DENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
+++ C C G C++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 168 PDHQ---------CPCGAGLCRVLTAKTGENIGRQFYRCPV--FEGSCGFFKW 209
>XP_009380138.1 PREDICTED: uncharacterized protein LOC103968599 [Musa acuminata
subsp. malaccensis]
Length = 373
Score = 87.8 bits (216), Expect = 3e-18
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 18/130 (13%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDE-----------------DKGTF 132
G C V +S++ +NPGR +Y C +E CGF WCDE G
Sbjct: 90 GPCVVLMSRTAKNPGRHFYSCPSMFEEK-CGFFLWCDEADCNQQRGFGSLVKPNRQHGLS 148
Query: 133 SAAKDSLG-STPKHSMDENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKG 309
S K G +P +N + E + PMCAC G C++LT + G K++AC IKKG
Sbjct: 149 SPVKQQCGVKSPNKPYQQNGVAE-SSYPMCACGAGKCRLLTMENGVNAGRKYFACTIKKG 207
Query: 310 QGSCGYMKWL 339
QG+C + +WL
Sbjct: 208 QGACNHFQWL 217
>JAU38524.1 Cold shock protein 1 [Noccaea caerulescens]
Length = 386
Score = 87.8 bits (216), Expect = 3e-18
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTP-KHSMD 180
G+C + S +++NPGR +Y C R + CGF +WCD AA S G+ P HS
Sbjct: 108 GICLILTSNTQKNPGRKFYRCPTREENGGCGFFQWCD-------AAVQSSGTQPGTHSYG 160
Query: 181 ENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
++ + C C G C++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 161 NTNESKFPDH-QCPCDAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 209
>JAU77130.1 Cold shock protein 1 [Noccaea caerulescens]
Length = 387
Score = 87.8 bits (216), Expect = 4e-18
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTP-KHSMD 180
G+C + S +++NPGR +Y C R + CGF +WCD AA S G+ P HS
Sbjct: 108 GICLILTSNTQKNPGRKFYRCPTREENGGCGFFQWCD-------AAVQSSGTQPGTHSYG 160
Query: 181 ENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
++ + C C G C++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 161 NTNESKFPDH-QCPCDAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 209
>JAU03642.1 Cold shock protein 1 [Noccaea caerulescens]
Length = 390
Score = 87.8 bits (216), Expect = 4e-18
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTP-KHSMD 180
G+C + S +++NPGR +Y C R + CGF +WCD AA S G+ P HS
Sbjct: 111 GICLILTSNTQKNPGRKFYRCPTREENGGCGFFQWCD-------AAVQSSGTQPGTHSYG 163
Query: 181 ENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
++ + C C G C++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 164 NTNESKFPDH-QCPCDAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 212
>XP_010535814.1 PREDICTED: DNA topoisomerase 3-alpha [Tarenaya hassleriana]
XP_010535815.1 PREDICTED: DNA topoisomerase 3-alpha
[Tarenaya hassleriana]
Length = 329
Score = 87.0 bits (214), Expect = 4e-18
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDK------GTFSAAKDSLGSTP 165
G+C + S +++NPGR +Y C +R + CGF +WCDED+ GT S A + P
Sbjct: 125 GICLILTSNTQKNPGRKFYKCPVREENGGCGFFQWCDEDRSSGTHAGTHSYANSNDSKFP 184
Query: 166 KHSMDENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
H C C G C+ILT+K + +G +FY CP + SCG+ KW
Sbjct: 185 DH--------------QCPCGSGSCRILTAKTGQNIGRQFYRCP--AFEASCGFFKW 225
>XP_018452565.1 PREDICTED: DNA-binding protein HEXBP-like [Raphanus sativus]
Length = 417
Score = 87.8 bits (216), Expect = 4e-18
Identities = 42/111 (37%), Positives = 67/111 (60%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
GVCS+ S +++NPGR +Y C R + CGF +WCD + S A+ S G++ +E
Sbjct: 106 GVCSILTSNTQKNPGRKFYKCPNREEHGGCGFFQWCDAVQS--SGAQHSYGNS-----NE 158
Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
++ +++ C C G C++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 159 SKFPDLQ----CPCGAGLCRVLTAKTGENIGRQFYRCPV--FEGSCGFFKW 203
>XP_009417060.1 PREDICTED: DNA-binding protein HEXBP-like isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 336
Score = 87.0 bits (214), Expect = 4e-18
Identities = 37/112 (33%), Positives = 58/112 (51%)
Frame = +1
Query: 1 AGVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMD 180
+G C V S + +NPGR +Y C L+ C F +WCD + S+++ L P S+
Sbjct: 144 SGTCLVRTSNTAKNPGRKFYTCPLKLDNGGCNFFEWCDNQSSSLSSSRKPLNHQPSLSVP 203
Query: 181 ENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
+ C C G C +L +K + +G ++Y CP+ +G GSCG+ KW
Sbjct: 204 GLQ---------CPCGAGSCLVLVTKAGKNVGQQYYRCPLDEGTGSCGFFKW 246
>JAU82338.1 Cold shock protein 1 [Noccaea caerulescens]
Length = 384
Score = 86.7 bits (213), Expect = 9e-18
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCD---EDKGTFSAAKDSLGSTPKHS 174
G+C + S +++NPGR +Y C R + CGF +WCD + GT S + P H
Sbjct: 109 GICLILTSNTQKNPGRKFYRCPTREENGGCGFFQWCDAAVQSSGTHSYGNTNESKFPDH- 167
Query: 175 MDENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
C C G C++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 168 -------------QCPCDAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 206
>XP_002264670.1 PREDICTED: cold shock protein 1 [Vitis vinifera] CBI24577.3 unnamed
protein product, partial [Vitis vinifera]
Length = 296
Score = 85.5 bits (210), Expect = 1e-17
Identities = 42/111 (37%), Positives = 56/111 (50%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
G C + S +++NPGR +Y C LR + CGF +WCD G + D+ G+
Sbjct: 100 GTCLILTSNTQKNPGRKFYKCPLREENGGCGFFQWCDNSSG---ISNDAFGAI------N 150
Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
LN C C G C ILT+K G +FY CP +G GSCG+ KW
Sbjct: 151 PGLNSSFPDLKCPCGAGSCLILTAKTGNNAGQQFYRCPANQG-GSCGFFKW 200
>XP_018463196.1 PREDICTED: DNA-binding protein HEXBP-like [Raphanus sativus]
Length = 417
Score = 86.7 bits (213), Expect = 1e-17
Identities = 41/111 (36%), Positives = 67/111 (60%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
G+CS+ S +++NPGR +Y C R + CGF +WCD + S + S G +++E
Sbjct: 106 GLCSILTSNTQKNPGRKFYKCPNREEHGGCGFFQWCDAVQS--SGTQHSYG-----NINE 158
Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
++L +++ C C G C++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 159 SKLPDLQ----CPCGAGLCRVLTAKTGENIGRQFYRCPV--FEGSCGFFKW 203
>OAP02671.1 hypothetical protein AXX17_AT3G35970 [Arabidopsis thaliana]
Length = 365
Score = 85.9 bits (211), Expect = 2e-17
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCD--EDKGTFSAAKDSLGSTPKHSM 177
G+C + S + +NPGR +Y C R + CGF +WCD + GT + +S G+
Sbjct: 94 GICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTSTTTSNSYGNGNDTKF 153
Query: 178 DENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
+++ C C G C++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 154 PDHQ---------CPCGAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 195
>JAT49308.1 Cellular nucleic acid-binding protein [Anthurium amnicola]
Length = 367
Score = 85.9 bits (211), Expect = 2e-17
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKD-SLGSTPKHSMD 180
G C V S + NPGR +Y C ++ + C F +WCD F A++ S S+P +
Sbjct: 157 GDCPVLTSNTARNPGRKFYRCPVKEENGGCKFFEWCDNPASGFPASRSFSNCSSPVPELP 216
Query: 181 ENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
C C G C +LT+K E+ +G +FY CP+ +G GSCG+ KW
Sbjct: 217 ------------CPCGAGSCLVLTAKTEKNIGQQFYRCPLDQGGGSCGFFKW 256
>NP_189872.1 zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
CAB86673.1 putative protein [Arabidopsis thaliana]
AAL38752.1 unknown protein [Arabidopsis thaliana]
AAM91719.1 unknown protein [Arabidopsis thaliana]
AEE77756.1 zinc knuckle (CCHC-type) family protein
[Arabidopsis thaliana]
Length = 372
Score = 85.9 bits (211), Expect = 2e-17
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCD--EDKGTFSAAKDSLGSTPKHSM 177
G+C + S + +NPGR +Y C R + CGF +WCD + GT + +S G+
Sbjct: 101 GICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTSTTTSNSYGNGNDTKF 160
Query: 178 DENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
+++ C C G C++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 161 PDHQ---------CPCGAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 202
>XP_013607174.1 PREDICTED: DNA-binding protein HEXBP [Brassica oleracea var.
oleracea]
Length = 377
Score = 84.3 bits (207), Expect = 6e-17
Identities = 43/111 (38%), Positives = 61/111 (54%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
GVCS+ S +++NPGR +Y C R + CGF +WCD A S G+ P +
Sbjct: 104 GVCSILTSNTQKNPGRKFYKCPNREENGGCGFFQWCD--------AVHSSGTQPGSYGNT 155
Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
NE N + C C G ++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 156 NESNFPDLQ--CPCGAGMSRVLTAKTGENIGRQFYRCPV--FEGSCGFFKW 202
>ALN96984.1 cold shock domain-containing protein 3 [Populus tomentosa]
Length = 325
Score = 83.6 bits (205), Expect = 8e-17
Identities = 41/111 (36%), Positives = 59/111 (53%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
GVC+VF + ++ N GR +Y C R + CGF +WCDE S A+++ G
Sbjct: 126 GVCNVFTANTERNRGRDFYKCPQRQESGGCGFFQWCDE-----SPAENNGGGFGGGGSHG 180
Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
+ N + C C G C ILTS++ + G +FY CP + QG CG+ KW
Sbjct: 181 SVSNSVFPELQCTCGAGSCLILTSRKGDNNGKQFYKCP--ENQGGCGFFKW 229
>XP_006292441.1 hypothetical protein CARUB_v10018659mg [Capsella rubella]
EOA25339.1 hypothetical protein CARUB_v10018659mg
[Capsella rubella]
Length = 433
Score = 84.3 bits (207), Expect = 8e-17
Identities = 42/111 (37%), Positives = 62/111 (55%)
Frame = +1
Query: 4 GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
G+C V S +++NPGR +Y C R + CGF +WCD A S G++ HS
Sbjct: 100 GLCLVLTSNTQKNPGRKFYKCPNREENGGCGFFQWCD--------AVQSSGTS--HSYGN 149
Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
N ++ + C C G C++LT+K E +G +FY CP+ +GSCG+ KW
Sbjct: 150 NNDSKFPDH-QCPCGAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 197
>XP_011468606.1 PREDICTED: cold shock domain-containing protein 3-like [Fragaria
vesca subsp. vesca]
Length = 438
Score = 84.3 bits (207), Expect = 8e-17
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 AGVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMD 180
+G C+V + +++N GR +Y C LR + CGF +WCD G + A G S
Sbjct: 240 SGTCAVLTANTEKNRGRKFYKCPLRQENGGCGFFEWCDNASGANAMAGAGSGG---FSRT 296
Query: 181 ENELNEMKNRPM-CACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
+N ++ P+ C C G C+ILT+K +G +FY CP +G SCG+ KW
Sbjct: 297 QNYASDSTFTPLECPCGGGQCRILTAKTGNNIGSQFYRCPGNEG-SSCGFFKW 348