BLASTX nr result

ID: Ephedra29_contig00026304 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00026304
         (339 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011623466.1 PREDICTED: uncharacterized protein LOC18434520 [A...    91   2e-19
ABR17577.1 unknown [Picea sitchensis]                                  90   5e-19
XP_006401381.1 hypothetical protein EUTSA_v10013799mg [Eutrema s...    89   2e-18
XP_009380138.1 PREDICTED: uncharacterized protein LOC103968599 [...    88   3e-18
JAU38524.1 Cold shock protein 1 [Noccaea caerulescens]                 88   3e-18
JAU77130.1 Cold shock protein 1 [Noccaea caerulescens]                 88   4e-18
JAU03642.1 Cold shock protein 1 [Noccaea caerulescens]                 88   4e-18
XP_010535814.1 PREDICTED: DNA topoisomerase 3-alpha [Tarenaya ha...    87   4e-18
XP_018452565.1 PREDICTED: DNA-binding protein HEXBP-like [Raphan...    88   4e-18
XP_009417060.1 PREDICTED: DNA-binding protein HEXBP-like isoform...    87   4e-18
JAU82338.1 Cold shock protein 1 [Noccaea caerulescens]                 87   9e-18
XP_002264670.1 PREDICTED: cold shock protein 1 [Vitis vinifera] ...    86   1e-17
XP_018463196.1 PREDICTED: DNA-binding protein HEXBP-like [Raphan...    87   1e-17
OAP02671.1 hypothetical protein AXX17_AT3G35970 [Arabidopsis tha...    86   2e-17
JAT49308.1 Cellular nucleic acid-binding protein [Anthurium amni...    86   2e-17
NP_189872.1 zinc knuckle (CCHC-type) family protein [Arabidopsis...    86   2e-17
XP_013607174.1 PREDICTED: DNA-binding protein HEXBP [Brassica ol...    84   6e-17
ALN96984.1 cold shock domain-containing protein 3 [Populus tomen...    84   8e-17
XP_006292441.1 hypothetical protein CARUB_v10018659mg [Capsella ...    84   8e-17
XP_011468606.1 PREDICTED: cold shock domain-containing protein 3...    84   8e-17

>XP_011623466.1 PREDICTED: uncharacterized protein LOC18434520 [Amborella
           trichopoda]
          Length = 424

 Score = 91.3 bits (225), Expect = 2e-19
 Identities = 44/112 (39%), Positives = 61/112 (54%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
           G C V ISKS++NPGR YY C +  +   CGF +WCD            + S P+     
Sbjct: 98  GPCPVSISKSRQNPGRKYYTCPMYQR---CGFFQWCD------------VPSLPQSG--- 139

Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKWL 339
                M   P+C C+ G C++ TSK ++  G +F+ CPIKKGQG+C +  WL
Sbjct: 140 ----SMLKFPICGCRAGECKLFTSKTDKNPGRQFFVCPIKKGQGACNFFLWL 187


>ABR17577.1 unknown [Picea sitchensis]
          Length = 374

 Score = 90.1 bits (222), Expect = 5e-19
 Identities = 43/111 (38%), Positives = 62/111 (55%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
           G C V +S +++NPGR +Y C LR     C F +WCD  +G+  A     G     S D 
Sbjct: 145 GPCLVLMSSTEKNPGRKFYKCPLREDGGRCNFFEWCDAAQGSSGAYG---GQARAFSADI 201

Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
           +E +E   +  C C  G C +LT+K E   G +F+ CP+K+G+GSC + KW
Sbjct: 202 SEGSEPSMQ--CPCGAGLCPVLTAKTERNSGRQFFRCPLKEGEGSCRFFKW 250


>XP_006401381.1 hypothetical protein EUTSA_v10013799mg [Eutrema salsugineum]
           ESQ42834.1 hypothetical protein EUTSA_v10013799mg
           [Eutrema salsugineum]
          Length = 384

 Score = 88.6 bits (218), Expect = 2e-18
 Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCD--EDKGTFSAAKDSLGSTPKHSM 177
           GVC +  S +++NPGR +Y C  R +   CGF +WCD  +  GT      S G+T +   
Sbjct: 108 GVCLILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTQPGTHHSYGNTNESKF 167

Query: 178 DENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
            +++         C C  G C++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 168 PDHQ---------CPCGAGLCRVLTAKTGENIGRQFYRCPV--FEGSCGFFKW 209


>XP_009380138.1 PREDICTED: uncharacterized protein LOC103968599 [Musa acuminata
           subsp. malaccensis]
          Length = 373

 Score = 87.8 bits (216), Expect = 3e-18
 Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 18/130 (13%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDE-----------------DKGTF 132
           G C V +S++ +NPGR +Y C    +E  CGF  WCDE                   G  
Sbjct: 90  GPCVVLMSRTAKNPGRHFYSCPSMFEEK-CGFFLWCDEADCNQQRGFGSLVKPNRQHGLS 148

Query: 133 SAAKDSLG-STPKHSMDENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKG 309
           S  K   G  +P     +N + E  + PMCAC  G C++LT +     G K++AC IKKG
Sbjct: 149 SPVKQQCGVKSPNKPYQQNGVAE-SSYPMCACGAGKCRLLTMENGVNAGRKYFACTIKKG 207

Query: 310 QGSCGYMKWL 339
           QG+C + +WL
Sbjct: 208 QGACNHFQWL 217


>JAU38524.1 Cold shock protein 1 [Noccaea caerulescens]
          Length = 386

 Score = 87.8 bits (216), Expect = 3e-18
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTP-KHSMD 180
           G+C +  S +++NPGR +Y C  R +   CGF +WCD       AA  S G+ P  HS  
Sbjct: 108 GICLILTSNTQKNPGRKFYRCPTREENGGCGFFQWCD-------AAVQSSGTQPGTHSYG 160

Query: 181 ENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
               ++  +   C C  G C++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 161 NTNESKFPDH-QCPCDAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 209


>JAU77130.1 Cold shock protein 1 [Noccaea caerulescens]
          Length = 387

 Score = 87.8 bits (216), Expect = 4e-18
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTP-KHSMD 180
           G+C +  S +++NPGR +Y C  R +   CGF +WCD       AA  S G+ P  HS  
Sbjct: 108 GICLILTSNTQKNPGRKFYRCPTREENGGCGFFQWCD-------AAVQSSGTQPGTHSYG 160

Query: 181 ENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
               ++  +   C C  G C++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 161 NTNESKFPDH-QCPCDAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 209


>JAU03642.1 Cold shock protein 1 [Noccaea caerulescens]
          Length = 390

 Score = 87.8 bits (216), Expect = 4e-18
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTP-KHSMD 180
           G+C +  S +++NPGR +Y C  R +   CGF +WCD       AA  S G+ P  HS  
Sbjct: 111 GICLILTSNTQKNPGRKFYRCPTREENGGCGFFQWCD-------AAVQSSGTQPGTHSYG 163

Query: 181 ENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
               ++  +   C C  G C++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 164 NTNESKFPDH-QCPCDAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 212


>XP_010535814.1 PREDICTED: DNA topoisomerase 3-alpha [Tarenaya hassleriana]
           XP_010535815.1 PREDICTED: DNA topoisomerase 3-alpha
           [Tarenaya hassleriana]
          Length = 329

 Score = 87.0 bits (214), Expect = 4e-18
 Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDK------GTFSAAKDSLGSTP 165
           G+C +  S +++NPGR +Y C +R +   CGF +WCDED+      GT S A  +    P
Sbjct: 125 GICLILTSNTQKNPGRKFYKCPVREENGGCGFFQWCDEDRSSGTHAGTHSYANSNDSKFP 184

Query: 166 KHSMDENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
            H               C C  G C+ILT+K  + +G +FY CP    + SCG+ KW
Sbjct: 185 DH--------------QCPCGSGSCRILTAKTGQNIGRQFYRCP--AFEASCGFFKW 225


>XP_018452565.1 PREDICTED: DNA-binding protein HEXBP-like [Raphanus sativus]
          Length = 417

 Score = 87.8 bits (216), Expect = 4e-18
 Identities = 42/111 (37%), Positives = 67/111 (60%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
           GVCS+  S +++NPGR +Y C  R +   CGF +WCD  +   S A+ S G++     +E
Sbjct: 106 GVCSILTSNTQKNPGRKFYKCPNREEHGGCGFFQWCDAVQS--SGAQHSYGNS-----NE 158

Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
           ++  +++    C C  G C++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 159 SKFPDLQ----CPCGAGLCRVLTAKTGENIGRQFYRCPV--FEGSCGFFKW 203


>XP_009417060.1 PREDICTED: DNA-binding protein HEXBP-like isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 336

 Score = 87.0 bits (214), Expect = 4e-18
 Identities = 37/112 (33%), Positives = 58/112 (51%)
 Frame = +1

Query: 1   AGVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMD 180
           +G C V  S + +NPGR +Y C L+     C F +WCD    + S+++  L   P  S+ 
Sbjct: 144 SGTCLVRTSNTAKNPGRKFYTCPLKLDNGGCNFFEWCDNQSSSLSSSRKPLNHQPSLSVP 203

Query: 181 ENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
             +         C C  G C +L +K  + +G ++Y CP+ +G GSCG+ KW
Sbjct: 204 GLQ---------CPCGAGSCLVLVTKAGKNVGQQYYRCPLDEGTGSCGFFKW 246


>JAU82338.1 Cold shock protein 1 [Noccaea caerulescens]
          Length = 384

 Score = 86.7 bits (213), Expect = 9e-18
 Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCD---EDKGTFSAAKDSLGSTPKHS 174
           G+C +  S +++NPGR +Y C  R +   CGF +WCD   +  GT S    +    P H 
Sbjct: 109 GICLILTSNTQKNPGRKFYRCPTREENGGCGFFQWCDAAVQSSGTHSYGNTNESKFPDH- 167

Query: 175 MDENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
                         C C  G C++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 168 -------------QCPCDAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 206


>XP_002264670.1 PREDICTED: cold shock protein 1 [Vitis vinifera] CBI24577.3 unnamed
           protein product, partial [Vitis vinifera]
          Length = 296

 Score = 85.5 bits (210), Expect = 1e-17
 Identities = 42/111 (37%), Positives = 56/111 (50%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
           G C +  S +++NPGR +Y C LR +   CGF +WCD   G    + D+ G+        
Sbjct: 100 GTCLILTSNTQKNPGRKFYKCPLREENGGCGFFQWCDNSSG---ISNDAFGAI------N 150

Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
             LN       C C  G C ILT+K     G +FY CP  +G GSCG+ KW
Sbjct: 151 PGLNSSFPDLKCPCGAGSCLILTAKTGNNAGQQFYRCPANQG-GSCGFFKW 200


>XP_018463196.1 PREDICTED: DNA-binding protein HEXBP-like [Raphanus sativus]
          Length = 417

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 41/111 (36%), Positives = 67/111 (60%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
           G+CS+  S +++NPGR +Y C  R +   CGF +WCD  +   S  + S G     +++E
Sbjct: 106 GLCSILTSNTQKNPGRKFYKCPNREEHGGCGFFQWCDAVQS--SGTQHSYG-----NINE 158

Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
           ++L +++    C C  G C++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 159 SKLPDLQ----CPCGAGLCRVLTAKTGENIGRQFYRCPV--FEGSCGFFKW 203


>OAP02671.1 hypothetical protein AXX17_AT3G35970 [Arabidopsis thaliana]
          Length = 365

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCD--EDKGTFSAAKDSLGSTPKHSM 177
           G+C +  S + +NPGR +Y C  R +   CGF +WCD  +  GT +   +S G+      
Sbjct: 94  GICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTSTTTSNSYGNGNDTKF 153

Query: 178 DENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
            +++         C C  G C++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 154 PDHQ---------CPCGAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 195


>JAT49308.1 Cellular nucleic acid-binding protein [Anthurium amnicola]
          Length = 367

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKD-SLGSTPKHSMD 180
           G C V  S +  NPGR +Y C ++ +   C F +WCD     F A++  S  S+P   + 
Sbjct: 157 GDCPVLTSNTARNPGRKFYRCPVKEENGGCKFFEWCDNPASGFPASRSFSNCSSPVPELP 216

Query: 181 ENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
                       C C  G C +LT+K E+ +G +FY CP+ +G GSCG+ KW
Sbjct: 217 ------------CPCGAGSCLVLTAKTEKNIGQQFYRCPLDQGGGSCGFFKW 256


>NP_189872.1 zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
           CAB86673.1 putative protein [Arabidopsis thaliana]
           AAL38752.1 unknown protein [Arabidopsis thaliana]
           AAM91719.1 unknown protein [Arabidopsis thaliana]
           AEE77756.1 zinc knuckle (CCHC-type) family protein
           [Arabidopsis thaliana]
          Length = 372

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCD--EDKGTFSAAKDSLGSTPKHSM 177
           G+C +  S + +NPGR +Y C  R +   CGF +WCD  +  GT +   +S G+      
Sbjct: 101 GICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTSTTTSNSYGNGNDTKF 160

Query: 178 DENELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
            +++         C C  G C++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 161 PDHQ---------CPCGAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 202


>XP_013607174.1 PREDICTED: DNA-binding protein HEXBP [Brassica oleracea var.
           oleracea]
          Length = 377

 Score = 84.3 bits (207), Expect = 6e-17
 Identities = 43/111 (38%), Positives = 61/111 (54%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
           GVCS+  S +++NPGR +Y C  R +   CGF +WCD        A  S G+ P    + 
Sbjct: 104 GVCSILTSNTQKNPGRKFYKCPNREENGGCGFFQWCD--------AVHSSGTQPGSYGNT 155

Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
           NE N    +  C C  G  ++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 156 NESNFPDLQ--CPCGAGMSRVLTAKTGENIGRQFYRCPV--FEGSCGFFKW 202


>ALN96984.1 cold shock domain-containing protein 3 [Populus tomentosa]
          Length = 325

 Score = 83.6 bits (205), Expect = 8e-17
 Identities = 41/111 (36%), Positives = 59/111 (53%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
           GVC+VF + ++ N GR +Y C  R +   CGF +WCDE     S A+++ G         
Sbjct: 126 GVCNVFTANTERNRGRDFYKCPQRQESGGCGFFQWCDE-----SPAENNGGGFGGGGSHG 180

Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
           +  N +     C C  G C ILTS++ +  G +FY CP  + QG CG+ KW
Sbjct: 181 SVSNSVFPELQCTCGAGSCLILTSRKGDNNGKQFYKCP--ENQGGCGFFKW 229


>XP_006292441.1 hypothetical protein CARUB_v10018659mg [Capsella rubella]
           EOA25339.1 hypothetical protein CARUB_v10018659mg
           [Capsella rubella]
          Length = 433

 Score = 84.3 bits (207), Expect = 8e-17
 Identities = 42/111 (37%), Positives = 62/111 (55%)
 Frame = +1

Query: 4   GVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMDE 183
           G+C V  S +++NPGR +Y C  R +   CGF +WCD        A  S G++  HS   
Sbjct: 100 GLCLVLTSNTQKNPGRKFYKCPNREENGGCGFFQWCD--------AVQSSGTS--HSYGN 149

Query: 184 NELNEMKNRPMCACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
           N  ++  +   C C  G C++LT+K  E +G +FY CP+   +GSCG+ KW
Sbjct: 150 NNDSKFPDH-QCPCGAGLCRVLTAKTGENVGRQFYRCPV--FEGSCGFFKW 197


>XP_011468606.1 PREDICTED: cold shock domain-containing protein 3-like [Fragaria
           vesca subsp. vesca]
          Length = 438

 Score = 84.3 bits (207), Expect = 8e-17
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   AGVCSVFISKSKENPGRLYYCCNLRHQENDCGFLKWCDEDKGTFSAAKDSLGSTPKHSMD 180
           +G C+V  + +++N GR +Y C LR +   CGF +WCD   G  + A    G     S  
Sbjct: 240 SGTCAVLTANTEKNRGRKFYKCPLRQENGGCGFFEWCDNASGANAMAGAGSGG---FSRT 296

Query: 181 ENELNEMKNRPM-CACKVGPCQILTSKEEETMGCKFYACPIKKGQGSCGYMKW 336
           +N  ++    P+ C C  G C+ILT+K    +G +FY CP  +G  SCG+ KW
Sbjct: 297 QNYASDSTFTPLECPCGGGQCRILTAKTGNNIGSQFYRCPGNEG-SSCGFFKW 348


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