BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00026210
         (261 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHN36100.1 Pentatricopeptide repeat-containing protein [Glycine ...    69   7e-12
XP_003516564.2 PREDICTED: pentatricopeptide repeat-containing pr...    69   7e-12
XP_016899654.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide...    69   1e-11
XP_004293074.2 PREDICTED: pentatricopeptide repeat-containing pr...    68   2e-11
KYP66781.1 Pentatricopeptide repeat-containing protein At5g66520...    67   3e-11
GAV88472.1 PPR domain-containing protein/PPR_2 domain-containing...    67   3e-11
XP_008391107.2 PREDICTED: pentatricopeptide repeat-containing pr...    66   8e-11
XP_009124194.1 PREDICTED: pentatricopeptide repeat-containing pr...    66   8e-11
XP_009124193.1 PREDICTED: pentatricopeptide repeat-containing pr...    66   8e-11
XP_015939149.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide...    66   1e-10
XP_019225240.1 PREDICTED: pentatricopeptide repeat-containing pr...    65   2e-10
KVI11791.1 hypothetical protein Ccrd_009794 [Cynara cardunculus ...    65   2e-10
OIV94805.1 hypothetical protein TanjilG_22002 [Lupinus angustifo...    65   2e-10
XP_019421060.1 PREDICTED: pentatricopeptide repeat-containing pr...    65   2e-10
KVI06441.1 Pentatricopeptide repeat-containing protein [Cynara c...    65   2e-10
XP_015900607.1 PREDICTED: pentatricopeptide repeat-containing pr...    65   3e-10
XP_008443284.2 PREDICTED: pentatricopeptide repeat-containing pr...    65   3e-10
XP_009350618.2 PREDICTED: pentatricopeptide repeat-containing pr...    65   3e-10
XP_009343748.1 PREDICTED: pentatricopeptide repeat-containing pr...    65   3e-10
JAU51561.1 Pentatricopeptide repeat-containing protein, mitochon...    60   4e-10

>KHN36100.1 Pentatricopeptide repeat-containing protein [Glycine soja]
           KRH76769.1 hypothetical protein GLYMA_01G173200 [Glycine
           max]
          Length = 516

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 33/82 (40%), Positives = 49/82 (59%)
 Frame = +3

Query: 9   AYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKH 188
           A+ LF + P  D+   N+M+ G+   GNLD AY++FQ + +K+V  W  +I GFV    H
Sbjct: 164 AHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMH 223

Query: 189 LEALGLFREMKCSGVKAQVKTL 254
            EAL L ++M  +G+K    TL
Sbjct: 224 KEALSLLQQMLVAGIKPDSITL 245


>XP_003516564.2 PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 580

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 33/82 (40%), Positives = 49/82 (59%)
 Frame = +3

Query: 9   AYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKH 188
           A+ LF + P  D+   N+M+ G+   GNLD AY++FQ + +K+V  W  +I GFV    H
Sbjct: 228 AHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMH 287

Query: 189 LEALGLFREMKCSGVKAQVKTL 254
            EAL L ++M  +G+K    TL
Sbjct: 288 KEALSLLQQMLVAGIKPDSITL 309


>XP_016899654.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like, partial [Cucumis
           melo]
          Length = 555

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 30/75 (40%), Positives = 50/75 (66%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           D A+ LF + P+ ++   N M++GF  NG L+RA ++F ++ +KDV  W A+ISG+V   
Sbjct: 285 DEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDLFYKMPNKDVVTWTAVISGYVQDG 344

Query: 183 KHLEALGLFREMKCS 227
           +  EAL +F+EM+ +
Sbjct: 345 RSEEALKVFKEMQAA 359


>XP_004293074.2 PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Fragaria vesca subsp. vesca]
          Length = 678

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 31/85 (36%), Positives = 51/85 (60%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           ++A  +F + P+ D+   N M+ G+  +G  + A EVF  ++ KDV  W  +ISG+V++ 
Sbjct: 223 ELAQGIFNEIPERDMVSCNAMIDGYVKSGKCELAEEVFMTMQHKDVVTWTTMISGYVFND 282

Query: 183 KHLEALGLFREMKCSGVKAQVKTLL 257
           +  EALGLFREM   G++     L+
Sbjct: 283 RPKEALGLFREMLSQGIRPDAPALV 307


>KYP66781.1 Pentatricopeptide repeat-containing protein At5g66520 family
           [Cajanus cajan]
          Length = 515

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 33/82 (40%), Positives = 48/82 (58%)
 Frame = +3

Query: 9   AYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKH 188
           A+ LF + P  DV   N M+ G+   GN+D+AY++FQ +  K+V  W  +I GFV    H
Sbjct: 162 AHVLFNQLPSRDVVSWNTMIDGYTTFGNVDKAYKIFQAMPVKNVISWTTMIVGFVREGMH 221

Query: 189 LEALGLFREMKCSGVKAQVKTL 254
            EAL L ++M  +G+K    TL
Sbjct: 222 KEALSLLQKMLVAGIKPDSITL 243


>GAV88472.1 PPR domain-containing protein/PPR_2 domain-containing protein/PPR_3
           domain-containing protein/DYW_deaminase
           domain-containing protein [Cephalotus follicularis]
          Length = 690

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 30/68 (44%), Positives = 47/68 (69%)
 Frame = +3

Query: 18  LFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKHLEA 197
           LF + PD D+   NV++SG+   G LD+A ++F E+ ++D   W A+ISG+V H KH +A
Sbjct: 141 LFDEMPDRDLCSWNVLISGYAKAGLLDKARKLFDEMTERDTFSWTAMISGYVRHDKHRDA 200

Query: 198 LGLFREMK 221
           LG++R M+
Sbjct: 201 LGVYRVMQ 208


>XP_008391107.2 PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Malus domestica]
          Length = 650

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 30/85 (35%), Positives = 52/85 (61%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           D+A+ LF K P+ D+   N M+ G+  +G  + A +VF+ +  KDV  W +++S +V++ 
Sbjct: 195 DLAHELFNKMPERDLVSCNAMIDGYGKSGKCELAEQVFRSMNKKDVVTWTSMVSAYVFNH 254

Query: 183 KHLEALGLFREMKCSGVKAQVKTLL 257
           +  EALGLFRE+   G++     L+
Sbjct: 255 RPKEALGLFREILNVGIRPDAPALV 279


>XP_009124194.1 PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial isoform X2 [Brassica rapa]
          Length = 651

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +3

Query: 42  DVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKHLEALGLFREMK 221
           D  LG+ +V  +C  G+++RA++VF+ + +KDV LW  +ISG  +H    +AL LF EM+
Sbjct: 399 DAFLGSALVDMYCKCGSIERAFKVFKTVAEKDVTLWTTMISGTAFHGNGKQALELFEEMQ 458

Query: 222 CSGVKAQVKTLL 257
             GVK    TLL
Sbjct: 459 EEGVKPNKVTLL 470


>XP_009124193.1 PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial isoform X1 [Brassica rapa] CDY50754.1
           BnaAnng10610D [Brassica napus]
          Length = 651

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +3

Query: 42  DVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKHLEALGLFREMK 221
           D  LG+ +V  +C  G+++RA++VF+ + +KDV LW  +ISG  +H    +AL LF EM+
Sbjct: 399 DAFLGSALVDMYCKCGSIERAFKVFKTVAEKDVTLWTTMISGTAFHGNGKQALELFEEMQ 458

Query: 222 CSGVKAQVKTLL 257
             GVK    TLL
Sbjct: 459 EEGVKPNKVTLL 470


>XP_015939149.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g46460, mitochondrial [Arachis duranensis]
          Length = 657

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 34/80 (42%), Positives = 45/80 (56%)
 Frame = +3

Query: 18  LFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKHLEA 197
           LF   P+ DV   N MV G+C NG ++ A  +F  +  KDV  W ++I G   + K  EA
Sbjct: 151 LFWAMPNRDVAAWNAMVHGYCSNGRVEDAMRLFYRMPLKDVISWTSMIGGLDQNGKSDEA 210

Query: 198 LGLFREMKCSGVKAQVKTLL 257
           L LF +M CSGVK    TL+
Sbjct: 211 LVLFEKMVCSGVKPSANTLV 230


>XP_019225240.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Nicotiana attenuata] OIT32789.1
           pentatricopeptide repeat-containing protein [Nicotiana
           attenuata]
          Length = 639

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 30/80 (37%), Positives = 52/80 (65%)
 Frame = +3

Query: 18  LFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKHLEA 197
           LF K P  DV   N+M++     G++D A+E+F ++ ++++  W A+I+GFV+  K  EA
Sbjct: 192 LFDKMPQRDVVSWNIMITQLAKKGDIDEAFELFSQMPERNLRSWTAMITGFVHCGKAKEA 251

Query: 198 LGLFREMKCSGVKAQVKTLL 257
           + LF+EM+ SG+ A   T++
Sbjct: 252 VRLFKEMEESGLSANEVTVV 271


>KVI11791.1 hypothetical protein Ccrd_009794 [Cynara cardunculus var. scolymus]
          Length = 782

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 30/69 (43%), Positives = 45/69 (65%)
 Frame = +3

Query: 51  LGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKHLEALGLFREMKCSG 230
           +GN +++ +C  GN+D+AY +F+EI DKD+  W  II+G+  H    EAL +F  MK SG
Sbjct: 447 VGNALLAMYCKCGNIDQAYIIFEEIADKDIVSWNTIIAGYARHGFGKEALRIFESMKRSG 506

Query: 231 VKAQVKTLL 257
           VK    T++
Sbjct: 507 VKPDEVTMV 515



 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 30/79 (37%), Positives = 45/79 (56%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           D+A  LF   P  +V   N M++GF  +  +D A ++F ++  +D   W AII+G+ +  
Sbjct: 330 DVAKELFDAMPCKNVSSWNTMITGFAQSSLIDLARDLFDKMPRRDCISWGAIIAGYAHLG 389

Query: 183 KHLEALGLFREMKCSGVKA 239
            + EAL LF EMK  G KA
Sbjct: 390 HNEEALRLFVEMKRDGEKA 408


>OIV94805.1 hypothetical protein TanjilG_22002 [Lupinus angustifolius]
          Length = 525

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 33/84 (39%), Positives = 47/84 (55%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           + A+ LF + P  DV   N M+ G+   GN+D AY+ FQ +  K+V  W  +I GFV   
Sbjct: 163 ESAHALFNRLPTRDVVSWNSMIDGYMKFGNIDMAYKTFQAMPVKNVITWTTMIVGFVRKG 222

Query: 183 KHLEALGLFREMKCSGVKAQVKTL 254
            H EAL L ++M  +G+K    TL
Sbjct: 223 IHKEALSLLQQMMAAGIKPDRITL 246


>XP_019421060.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Lupinus angustifolius]
          Length = 528

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 33/84 (39%), Positives = 47/84 (55%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           + A+ LF + P  DV   N M+ G+   GN+D AY+ FQ +  K+V  W  +I GFV   
Sbjct: 166 ESAHALFNRLPTRDVVSWNSMIDGYMKFGNIDMAYKTFQAMPVKNVITWTTMIVGFVRKG 225

Query: 183 KHLEALGLFREMKCSGVKAQVKTL 254
            H EAL L ++M  +G+K    TL
Sbjct: 226 IHKEALSLLQQMMAAGIKPDRITL 249


>KVI06441.1 Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 541

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 32/71 (45%), Positives = 47/71 (66%)
 Frame = +3

Query: 39  HDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKHLEALGLFREM 218
           H + L N +V+ +   G LD+AYEVFQEI +KDV  W A+ISGF  + +  EA+ +FREM
Sbjct: 208 HALNLCNSLVAMYSKCGQLDKAYEVFQEIPNKDVVSWTAMISGFASNGRGREAISVFREM 267

Query: 219 KCSGVKAQVKT 251
           + +G+    +T
Sbjct: 268 ERTGIPPDEQT 278


>XP_015900607.1 PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Ziziphus jujuba] XP_015869673.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g35030, mitochondrial-like [Ziziphus jujuba]
           XP_015869679.1 PREDICTED: pentatricopeptide
           repeat-containing protein At2g35030, mitochondrial-like
           [Ziziphus jujuba] XP_015872496.1 PREDICTED:
           pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Ziziphus jujuba]
          Length = 647

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 28/76 (36%), Positives = 48/76 (63%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           D A+ LF + P+ D+   N M++GF  NG+L RA+E+F E+  K+   W  +I+G++   
Sbjct: 268 DEAFELFERMPERDMPSWNTMITGFIQNGDLKRAWELFNEMPQKNAISWTTMITGYIQDG 327

Query: 183 KHLEALGLFREMKCSG 230
           ++ EAL +F +M  +G
Sbjct: 328 QNEEALKIFSKMVAAG 343



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 25/72 (34%), Positives = 41/72 (56%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           D A  LF + P  +V   N M++G+  N  LD A+E+F+ + ++D+  W  +I+GF+ + 
Sbjct: 237 DEARELFDRIPVRNVVSWNAMITGYAQNMRLDEAFELFERMPERDMPSWNTMITGFIQNG 296

Query: 183 KHLEALGLFREM 218
               A  LF EM
Sbjct: 297 DLKRAWELFNEM 308


>XP_008443284.2 PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial [Cucumis melo]
          Length = 649

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 29/75 (38%), Positives = 48/75 (64%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           D A+ LF + P+ ++   N M++GF  NG L+RA ++F ++ +K+V  W A+ISG V   
Sbjct: 270 DEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDLFYKMSNKNVVTWTAVISGHVQDG 329

Query: 183 KHLEALGLFREMKCS 227
           +  EAL +F EM+ +
Sbjct: 330 RSEEALKIFSEMQAA 344


>XP_009350618.2 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 650

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 28/72 (38%), Positives = 48/72 (66%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           D+A+ LF K P+ D+   N M+ G+  +G  + A +VF+ + +KDV  W +++S +V++ 
Sbjct: 195 DLAHELFNKMPERDLVSCNAMIDGYGKSGKCELAEQVFRSMNEKDVVTWTSMVSAYVFNH 254

Query: 183 KHLEALGLFREM 218
           +  EALGLFRE+
Sbjct: 255 RPKEALGLFREI 266


>XP_009343748.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 650

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 28/72 (38%), Positives = 48/72 (66%)
 Frame = +3

Query: 3   DMAYFLFRKFPDHDVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHA 182
           D+A+ LF K P+ D+   N M+ G+  +G  + A +VF+ + +KDV  W +++S +V++ 
Sbjct: 195 DLAHELFNKMPERDLVSCNAMIDGYGKSGKCELAEQVFRSMNEKDVVTWTSMVSAYVFNH 254

Query: 183 KHLEALGLFREM 218
           +  EALGLFRE+
Sbjct: 255 RPKEALGLFREI 266


>JAU51561.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial
           [Noccaea caerulescens]
          Length = 78

 Score = 60.1 bits (144), Expect = 4e-10
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = +3

Query: 42  DVKLGNVMVSGFCHNGNLDRAYEVFQEIRDKDVDLWVAIISGFVYHAKHLEALGLFREMK 221
           D  LG+ ++  +C  G ++RA+ VF+ + +KDV LW  +I+GF +H    +AL LF EM+
Sbjct: 11  DAFLGSALIDMYCKCGIIERAFMVFKTVSEKDVTLWTTMITGFAFHGNGKQALQLFEEMQ 70

Query: 222 CSGV 233
             GV
Sbjct: 71  EEGV 74