BLASTX nr result

ID: Ephedra29_contig00026209 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00026209
         (323 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_018727687.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   5e-06

>XP_018727687.1 PREDICTED: pentatricopeptide repeat-containing protein At4g16470
           [Eucalyptus grandis]
          Length = 466

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
 Frame = +3

Query: 96  GSATEALKALMKNG-RADAETCAVALRE---TPSISHGKTIHAKIILCGLAPNAFLGNNL 263
           G  TEA++ L   G + DAET A+ ++E   + +  +G+ +HA++++ G  P+A++   L
Sbjct: 59  GRLTEAVRLLCNTGVQVDAETYALLVQECIYSKAYENGRIVHAQMVVVGYVPDAYMKTKL 118

Query: 264 LLMYTKHGTLGDANKAF 314
           L++YTK G L  AN  F
Sbjct: 119 LILYTKLGDLNTANILF 135


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