BLASTX nr result

ID: Ephedra29_contig00026203 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00026203
         (333 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CCP29686.1 HD transcription factor [Gnetum gnemon]                     64   6e-10
CAT02929.1 putative wuschel homeobox protein WOX2, partial [Gnet...    58   4e-09
ADE77607.1 unknown [Picea sitchensis]                                  53   2e-06

>CCP29686.1 HD transcription factor [Gnetum gnemon]
          Length = 214

 Score = 63.5 bits (153), Expect = 6e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +1

Query: 244 VRWNPTKEQLRILENVYNGGNRSPRTEQIQ 333
           VRWNPTKEQLR LENVYNGGN+SPRTEQIQ
Sbjct: 39  VRWNPTKEQLRTLENVYNGGNKSPRTEQIQ 68


>CAT02929.1 putative wuschel homeobox protein WOX2, partial [Gnetum gnemon]
          Length = 50

 Score = 57.8 bits (138), Expect = 4e-09
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 253 NPTKEQLRILENVYNGGNRSPRTEQIQ 333
           NPTKEQLRILENVYNGGN+SPRTEQIQ
Sbjct: 2   NPTKEQLRILENVYNGGNKSPRTEQIQ 28


>ADE77607.1 unknown [Picea sitchensis]
          Length = 159

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 21/29 (72%), Positives = 27/29 (93%)
 Frame = +1

Query: 247 RWNPTKEQLRILENVYNGGNRSPRTEQIQ 333
           RW+PT+EQLRILE +YNGGN++P+ EQIQ
Sbjct: 11  RWSPTREQLRILETIYNGGNQTPKPEQIQ 39


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