BLASTX nr result
ID: Ephedra29_contig00026146
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00026146
(540 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU30399.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Noccae... 108 2e-24
ABI96971.1 putative gag-pol polyprotein [Triticum monococcum sub... 107 7e-24
AAQ56338.1 putative gag-pol polyprotein [Oryza sativa Japonica G... 107 1e-23
CAE02465.2 OSJNBa0042D13.18 [Oryza sativa Japonica Group] 107 1e-23
AAM94350.1 gag-pol polyprotein [Zea mays] 106 2e-23
AAX95495.1 Retrotransposon gag protein, putative [Oryza sativa J... 106 2e-23
AAX96717.1 retrotransposon protein, putative, Ty3-gypsy sub-clas... 106 2e-23
AAK94516.1 gag-pol polyprotein [Hordeum vulgare] 105 4e-23
AAK51582.1 Putative retroelement [Oryza sativa Japonica Group] A... 105 4e-23
ABA98082.1 retrotransposon protein, putative, Ty3-gypsy subclass... 105 5e-23
BAH80072.1 putative unclassified retrotransposon protein [Oryza ... 105 5e-23
AAX96647.1 retrotransposon protein, putative, Ty3-gypsy sub-clas... 105 6e-23
AAX96591.1 retrotransposon protein, putative, Ty3-gypsy sub-clas... 105 6e-23
KYP46493.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 100 6e-23
CAH66606.1 H0211A12.9 [Oryza sativa Indica Group] 104 8e-23
CAE02411.2 OSJNBa0024J22.19 [Oryza sativa Japonica Group] 104 8e-23
KYP36067.1 Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan] 99 1e-22
KYP31425.1 Retrotransposable element Tf2 [Cajanus cajan] 99 2e-22
AAK94517.1 gag-pol polyprotein [Hordeum vulgare] 103 2e-22
XP_013652081.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 102 4e-22
>JAU30399.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Noccaea
caerulescens]
Length = 469
Score = 108 bits (270), Expect = 2e-24
Identities = 61/160 (38%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPK-------MPDKIGCCFDDNKDAIE 169
+ W+ L HVE A N++KH T SPF + +G+ P+ +P + C FD + A +
Sbjct: 235 KSWEECLPHVEFAYNHAKHSATLFSPFEIVYGFNPQSPLDLIPLPLSVKCSFDGKEKAEQ 294
Query: 170 XXXXXXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLA 349
KE +E Q + A+KG K+ F GD + IHLRK+RFP KL
Sbjct: 295 VRKIHAKA----KENIEKKTRQYEKQANKGRKELIFEEGDLVWIHLRKDRFPEERKSKLM 350
Query: 350 KCRIGPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPY 469
GP +VK I NNAY++DL + IS +FNV DL+PY
Sbjct: 351 PRVDGPFEVVKKINNNAYQIDLQGKYNISPSFNVSDLIPY 390
>ABI96971.1 putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 107 bits (268), Expect = 7e-24
Identities = 61/161 (37%), Positives = 85/161 (52%), Gaps = 3/161 (1%)
Frame = +2
Query: 8 RRQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMP-DKIGCCFDD--NKDAIEXXX 178
++ W+ L H+E A N S H T PF + +G+ P+ P D + + N DA E
Sbjct: 1429 KKMWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSE 1488
Query: 179 XXXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCR 358
KE +E N + K DKG K F GD + +HLRK+RFP L KL
Sbjct: 1489 LILKIHELTKENIERMNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRA 1548
Query: 359 IGPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP +++ I +NAY+++LPA F +S TFN+ DL PY G E
Sbjct: 1549 DGPFKVLEKINDNAYKLELPADFGVSPTFNIADLKPYLGEE 1589
>AAQ56338.1 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 107 bits (266), Expect = 1e-23
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E ACN S H T PF + + P+ P + K DA +
Sbjct: 1365 KMWEECLPHIEFACNRSLHSTTKMCPFQIVYSLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1424
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 1425 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRAD 1484
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F +S TFNV DL PY G E
Sbjct: 1485 GPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 1524
>CAE02465.2 OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 107 bits (266), Expect = 1e-23
Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E A N S H T PF + +G P+ P + K DA +
Sbjct: 1335 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1394
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 1395 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRAD 1454
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F++S TFNV DL PY G E
Sbjct: 1455 GPFKVLAKINENAYKIDLPADFRVSSTFNVADLKPYLGEE 1494
>AAM94350.1 gag-pol polyprotein [Zea mays]
Length = 1618
Score = 106 bits (265), Expect = 2e-23
Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W++ L H+E A N S H T PF + +G P+ P + K DA
Sbjct: 1389 KMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAEL 1448
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K +DKG K+ F GD + +HLRKERFP L KL
Sbjct: 1449 MLKLHETTKENIERMNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRAD 1508
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPEAQ 487
GP +++ I +NAY +DLPA F +S TFN+ DL PY G E +
Sbjct: 1509 GPFKVLEKINDNAYRLDLPADFGVSPTFNIADLKPYLGEEVE 1550
>AAX95495.1 Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 106 bits (265), Expect = 2e-23
Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E A N S H T PF + +G P+ P + K DA +
Sbjct: 1496 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1555
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 1556 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDMVWLHLRKERFPDLRKSKLMPRAD 1615
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F++S TFNV DL PY G E
Sbjct: 1616 GPFKVLAKINENAYKIDLPADFRVSPTFNVADLKPYLGEE 1655
>AAX96717.1 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] ABA93040.2 retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1748
Score = 106 bits (265), Expect = 2e-23
Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E A N S H T PF + +G P+ P + K DA +
Sbjct: 1505 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1564
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 1565 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDMVWLHLRKERFPDLRKSKLMPRAD 1624
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F++S TFNV DL PY G E
Sbjct: 1625 GPFKVLAKINENAYKIDLPADFRVSPTFNVADLKPYLGEE 1664
>AAK94516.1 gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 105 bits (262), Expect = 4e-23
Identities = 61/158 (38%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Frame = +2
Query: 17 WDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDK---IGCCFDDNKDAIEXXXXXX 187
W+ L H+E A N S H T PF + +G+ P+ P I N DA E
Sbjct: 1447 WEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELIL 1506
Query: 188 XXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRIGP 367
KE +E N + K DKG K F GD + +HLRK+RFP L KL GP
Sbjct: 1507 KMHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGP 1566
Query: 368 VCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
+++ I +NAY ++LPA F +S TFN+ DL PY G E
Sbjct: 1567 FKVLEKINDNAYRLELPADFGVSPTFNIADLKPYLGEE 1604
>AAK51582.1 Putative retroelement [Oryza sativa Japonica Group] AAP52850.1
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 2447
Score = 105 bits (262), Expect = 4e-23
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E A N S H T PF + +G P+ P + K DA +
Sbjct: 1386 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1445
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 1446 MLKLHETTKENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMPRAD 1505
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F +S TFNV DL PY G E
Sbjct: 1506 GPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 1545
>ABA98082.1 retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 105 bits (261), Expect = 5e-23
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E A N S H T PF + +G P+ P + K DA +
Sbjct: 574 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 633
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 634 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRAD 693
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F +S TFNV DL PY G E
Sbjct: 694 GPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 733
>BAH80072.1 putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 105 bits (261), Expect = 5e-23
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E A N S H T PF + +G P+ P + K DA +
Sbjct: 605 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 664
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 665 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRAD 724
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F +S TFNV DL PY G E
Sbjct: 725 GPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 764
>AAX96647.1 retrotransposon protein, putative, Ty3-gypsy sub-class, partial
[Oryza sativa Japonica Group]
Length = 1238
Score = 105 bits (261), Expect = 6e-23
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E A N S H T PF + +G P+ P + K DA +
Sbjct: 1032 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1091
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 1092 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRAD 1151
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F +S TFNV DL PY G E
Sbjct: 1152 GPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 1191
>AAX96591.1 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] ABA93201.1 retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1297
Score = 105 bits (261), Expect = 6e-23
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E A N S H T PF + +G P+ P + K DA +
Sbjct: 1054 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1113
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 1114 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRAD 1173
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F +S TFNV DL PY G E
Sbjct: 1174 GPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 1213
>KYP46493.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 231
Score = 100 bits (249), Expect = 6e-23
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKI----GCCFDDNKDAIEXXX 178
+ WD L H+E A N HK T SPF V +G+ P P + G +K+ +
Sbjct: 11 KSWDEYLPHIEFAYNRVVHKTTKISPFEVVYGFNPLTPLDLIPLPGSSHYFHKEGVSRAE 70
Query: 179 XXXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCR 358
K ++ N +T KG K F D + +HLRKE+FP KL
Sbjct: 71 FVKKLHEKVKTHIQQQNERTTLERSKGKKDLIFEEADWVWLHLRKEKFPSQRKSKLNPRG 130
Query: 359 IGPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPEAQ 487
GP +++ I NNAY +DLP+ + +S TFN+ DL+P+ G +A+
Sbjct: 131 DGPFQVLQRINNNAYRLDLPSDYGVSNTFNISDLIPFAGYDAE 173
>CAH66606.1 H0211A12.9 [Oryza sativa Indica Group]
Length = 1667
Score = 104 bits (260), Expect = 8e-23
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E A N S H T PF + +G P+ P + K DA +
Sbjct: 1124 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1183
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 1184 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRAD 1243
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F +S TFNV DL PY G E
Sbjct: 1244 GPFKVLAKINENAYKIDLPADFGVSLTFNVADLKPYLGEE 1283
>CAE02411.2 OSJNBa0024J22.19 [Oryza sativa Japonica Group]
Length = 1667
Score = 104 bits (260), Expect = 8e-23
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNK---DAIEXXXX 181
+ W+ L H+E A N S H T PF + +G P+ P + K DA +
Sbjct: 1124 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1183
Query: 182 XXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
KE +E N + K DKG ++ F GD + +HLRKERFP L KL
Sbjct: 1184 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRAD 1243
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
GP ++ I NAY++DLPA F +S TFNV DL PY G E
Sbjct: 1244 GPFKVLAKINENAYKIDLPADFGVSLTFNVADLKPYLGEE 1283
>KYP36067.1 Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
Length = 199
Score = 99.0 bits (245), Expect = 1e-22
Identities = 55/159 (34%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDN----KDAIEXXX 178
+ WD L H+E + N HK T SPF V +G+ P P + D + K+ +
Sbjct: 11 KSWDEYLPHIEFSYNRVVHKTTKISPFEVVYGFNPLTPLDLIPLPDSSHYFHKEGVSRAE 70
Query: 179 XXXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCR 358
K ++ N++T KG K F GD +HLRKERFP KL
Sbjct: 71 FVRKLHEKVKTHIQQQNDRTALERSKGKKDLIFEEGDWAWLHLRKERFPSQRKSKLNPRG 130
Query: 359 IGPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEG 475
GP +++ I NNAY +DLP+ + +S TFN+ DL+P+ G
Sbjct: 131 DGPFQVLQIINNNAYRLDLPSDYGVSNTFNISDLIPFVG 169
>KYP31425.1 Retrotransposable element Tf2 [Cajanus cajan]
Length = 234
Score = 99.4 bits (246), Expect = 2e-22
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Frame = +2
Query: 8 RRQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDD----NKDAIEXX 175
+ WD+ L+HVE A N HK T SPF + +G+ P P + D +K+
Sbjct: 10 KNSWDDYLSHVEFAYNRVVHKTTKISPFEIVYGFNPLTPFDLLPLPDVASFIHKEGTSRA 69
Query: 176 XXXXXXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKC 355
K ++ N + Y +KG K+ F GD + +HLRK+RFP KL+
Sbjct: 70 EFVKNLHERVKNHIQSQNEKYTKYNNKGKKEFVFNEGDWVWLHLRKDRFPSKRKSKLSPR 129
Query: 356 RIGPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPEAQHFQALD 505
GP ++KCI NNAY +DLP+ + +S +FN+ DL + G Q +LD
Sbjct: 130 GDGPFQVLKCINNNAYVLDLPSKYGVSPSFNIYDLSLFTGFVDQEEDSLD 179
>AAK94517.1 gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 103 bits (257), Expect = 2e-22
Identities = 60/158 (37%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Frame = +2
Query: 17 WDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDK---IGCCFDDNKDAIEXXXXXX 187
W+ L H+E A N S H T PF + +G+ P+ P I N DA E
Sbjct: 1444 WEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELIL 1503
Query: 188 XXXXXXKECLELYNNQTKAYADKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRIGP 367
KE +E N + K DKG K F GD + +HLRK+RFP L KL GP
Sbjct: 1504 KMHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGP 1563
Query: 368 VCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPYEGPE 481
+++ I +NAY ++LP F +S TFN+ DL PY G E
Sbjct: 1564 FKVLEKINDNAYRLELPXDFGVSPTFNIADLKPYLGEE 1601
>XP_013652081.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC106356911
[Brassica napus]
Length = 1244
Score = 102 bits (255), Expect = 4e-22
Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Frame = +2
Query: 11 RQWDNILAHVELACNNSKHKGTGHSPFFVAFGYYPKMPDKIGCCFDDNKDAIEXXXXXXX 190
R W+ L HVE A N++KH T SPF + +G+ P P + + +++
Sbjct: 988 RTWEECLPHVEFAYNHAKHSATKFSPFEIVYGFNPLTPLDLMPLPLSERVSLDGQKKAEL 1047
Query: 191 XXXXXKECLELYNNQTKAYA---DKGCKKRFFVVGDAILIHLRKERFPGLGTGKLAKCRI 361
++ N+TK YA +KG K+ F GD + IHLRK+RFP KL
Sbjct: 1048 VKQIHEKARINIENKTKLYAKYANKGIKEMIFEEGDLVWIHLRKDRFPNERKSKLMPRLD 1107
Query: 362 GPVCIVKCIGNNAYEVDLPASFKISKTFNVEDLVPY 469
GP +++ I NNAY++DL + +S +FNV DLVPY
Sbjct: 1108 GPFKVIRKINNNAYQLDLQGKYNVSSSFNVTDLVPY 1143