BLASTX nr result
ID: Ephedra29_contig00026142
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00026142
(300 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_019058608.1 PREDICTED: DNA topoisomerase 3-alpha isoform X3 [... 80 3e-15
XP_010546323.1 PREDICTED: DNA topoisomerase 3-alpha isoform X2 [... 80 3e-15
XP_010546322.1 PREDICTED: DNA topoisomerase 3-alpha isoform X1 [... 80 3e-15
XP_017216906.1 PREDICTED: DNA topoisomerase 3-alpha [Daucus caro... 78 9e-15
XP_013701142.1 PREDICTED: DNA topoisomerase 3-alpha-like [Brassi... 75 1e-13
XP_009130424.1 PREDICTED: DNA topoisomerase 3-alpha [Brassica rapa] 75 1e-13
CDY31345.1 BnaA02g33960D [Brassica napus] 75 1e-13
XP_010025764.1 PREDICTED: DNA topoisomerase 3-alpha isoform X2 [... 74 2e-13
XP_010025763.1 PREDICTED: DNA topoisomerase 3-alpha isoform X1 [... 74 2e-13
XP_002864876.1 hypothetical protein ARALYDRAFT_496584 [Arabidops... 73 5e-13
KYP47464.1 DNA topoisomerase 3-alpha, partial [Cajanus cajan] 72 1e-12
XP_013616695.1 PREDICTED: DNA topoisomerase 3-alpha [Brassica ol... 72 1e-12
CDY39837.1 BnaC02g42810D [Brassica napus] 72 1e-12
OAO94111.1 TOP3A [Arabidopsis thaliana] 72 1e-12
NP_201197.1 topoisomerase 3alpha [Arabidopsis thaliana] Q9LVP1.1... 72 1e-12
XP_011629125.1 PREDICTED: DNA topoisomerase 3-alpha [Amborella t... 72 1e-12
ERM96738.1 hypothetical protein AMTR_s00202p00033660 [Amborella ... 72 1e-12
XP_018434910.1 PREDICTED: DNA topoisomerase 3-alpha [Raphanus sa... 72 2e-12
XP_010484154.1 PREDICTED: DNA topoisomerase 3-alpha-like [Cameli... 71 2e-12
XP_012857604.1 PREDICTED: DNA topoisomerase 3-alpha [Erythranthe... 71 2e-12
>XP_019058608.1 PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Tarenaya
hassleriana]
Length = 732
Score = 79.7 bits (195), Expect = 3e-15
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQST-TTAPTRNQATGR 225
A+V C TC L+TANTE NRGRKF+SC +GC+FF WEDSI +T ++A ++TGR
Sbjct: 626 ASVSCSTCGTPCVLRTANTEANRGRKFFSCPSQGCSFFSWEDSISNTASSASNSGRSTGR 685
Query: 226 GRCTGNSRGGRQS 264
GR G RGGR+S
Sbjct: 686 GR--GRGRGGRES 696
>XP_010546323.1 PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Tarenaya
hassleriana]
Length = 906
Score = 79.7 bits (195), Expect = 3e-15
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQST-TTAPTRNQATGR 225
A+V C TC L+TANTE NRGRKF+SC +GC+FF WEDSI +T ++A ++TGR
Sbjct: 800 ASVSCSTCGTPCVLRTANTEANRGRKFFSCPSQGCSFFSWEDSISNTASSASNSGRSTGR 859
Query: 226 GRCTGNSRGGRQS 264
GR G RGGR+S
Sbjct: 860 GR--GRGRGGRES 870
>XP_010546322.1 PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Tarenaya
hassleriana]
Length = 930
Score = 79.7 bits (195), Expect = 3e-15
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQST-TTAPTRNQATGR 225
A+V C TC L+TANTE NRGRKF+SC +GC+FF WEDSI +T ++A ++TGR
Sbjct: 824 ASVSCSTCGTPCVLRTANTEANRGRKFFSCPSQGCSFFSWEDSISNTASSASNSGRSTGR 883
Query: 226 GRCTGNSRGGRQS 264
GR G RGGR+S
Sbjct: 884 GR--GRGRGGRES 894
>XP_017216906.1 PREDICTED: DNA topoisomerase 3-alpha [Daucus carota subsp. sativus]
Length = 951
Score = 78.2 bits (191), Expect = 9e-15
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Frame = +1
Query: 58 NVVCETCQNTLELQTANTENNRGRKFYSCRGCNFFKWEDSIQSTTTAPT---RNQATGRG 228
++ C +C N L+TANTE+NRG+KFYSC+GCNFF WED + + AP+ NQA+ +
Sbjct: 841 SIPCGSCGNPCALRTANTESNRGKKFYSCQGCNFFIWED-VHNERNAPSSNYSNQASAQS 899
Query: 229 RCTGNSRGGR---QSNRAGNRTDSRNE 300
R G RGGR +N GN + E
Sbjct: 900 RRGGRGRGGRSGGSTNGGGNFVSATGE 926
>XP_013701142.1 PREDICTED: DNA topoisomerase 3-alpha-like [Brassica napus]
Length = 921
Score = 74.7 bits (182), Expect = 1e-13
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +1
Query: 61 VVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQS-TTTAPTRNQATGRGR 231
V C TC ++TANTE NRGRKFYSC +GCNFF WEDSI + T A T + + G GR
Sbjct: 805 VSCTTCGTPCAIRTANTEANRGRKFYSCPSQGCNFFTWEDSISNGTGNATTGSNSGGSGR 864
Query: 232 CTGNSRGGRQSNRAGNR 282
RGG + NR G +
Sbjct: 865 ---RGRGGGRGNRGGGQ 878
>XP_009130424.1 PREDICTED: DNA topoisomerase 3-alpha [Brassica rapa]
Length = 921
Score = 74.7 bits (182), Expect = 1e-13
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +1
Query: 61 VVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQS-TTTAPTRNQATGRGR 231
V C TC ++TANTE NRGRKFYSC +GCNFF WEDSI + T A T + + G GR
Sbjct: 805 VSCTTCGTPCAIRTANTEANRGRKFYSCPSQGCNFFTWEDSISNGTGNATTGSNSGGSGR 864
Query: 232 CTGNSRGGRQSNRAGNR 282
RGG + NR G +
Sbjct: 865 ---RGRGGGRGNRGGGQ 878
>CDY31345.1 BnaA02g33960D [Brassica napus]
Length = 921
Score = 74.7 bits (182), Expect = 1e-13
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +1
Query: 61 VVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQS-TTTAPTRNQATGRGR 231
V C TC ++TANTE NRGRKFYSC +GCNFF WEDSI + T A T + + G GR
Sbjct: 805 VSCTTCGTPCAIRTANTEANRGRKFYSCPSQGCNFFTWEDSISNGTGNATTGSNSGGSGR 864
Query: 232 CTGNSRGGRQSNRAGNR 282
RGG + NR G +
Sbjct: 865 ---RGRGGGRGNRGGGQ 878
>XP_010025764.1 PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Eucalyptus grandis]
KCW62501.1 hypothetical protein EUGRSUZ_H05141
[Eucalyptus grandis]
Length = 914
Score = 74.3 bits (181), Expect = 2e-13
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +1
Query: 58 NVVCETCQNTLELQTANTENNRGRKFYSCR--GCNFFKWEDSIQSTTTAPTRNQATGRGR 231
+V C+TC + ++TANT NN+GRKFYSC+ GCNFF WEDS+Q+ N R
Sbjct: 801 SVSCDTCGASCPMRTANTANNKGRKFYSCQSEGCNFFVWEDSLQNGGGRHGANGGASNSR 860
Query: 232 CTGNSRGGR-QSNRAGN 279
NS GGR + R GN
Sbjct: 861 ARSNSLGGRGRGGRGGN 877
>XP_010025763.1 PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Eucalyptus grandis]
KCW62500.1 hypothetical protein EUGRSUZ_H05141
[Eucalyptus grandis]
Length = 915
Score = 74.3 bits (181), Expect = 2e-13
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +1
Query: 58 NVVCETCQNTLELQTANTENNRGRKFYSCR--GCNFFKWEDSIQSTTTAPTRNQATGRGR 231
+V C+TC + ++TANT NN+GRKFYSC+ GCNFF WEDS+Q+ N R
Sbjct: 802 SVSCDTCGASCPMRTANTANNKGRKFYSCQSEGCNFFVWEDSLQNGGGRHGANGGASNSR 861
Query: 232 CTGNSRGGR-QSNRAGN 279
NS GGR + R GN
Sbjct: 862 ARSNSLGGRGRGGRGGN 878
>XP_002864876.1 hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
lyrata] EFH41135.1 hypothetical protein ARALYDRAFT_496584
[Arabidopsis lyrata subsp. lyrata]
Length = 923
Score = 73.2 bits (178), Expect = 5e-13
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSI-QSTTTAPTRNQATGR 225
+ V C TC L+TANTE NRGR+F+SC +GC+FF WEDSI S+ A T + + G
Sbjct: 802 STVSCNTCGTQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDSINNSSGNATTGSNSGGS 861
Query: 226 GRCTGNSRGGRQSNRAGNRTDS 291
GR G RGGR G R +S
Sbjct: 862 GR-RGRGRGGRGGQSGGGRRNS 882
>KYP47464.1 DNA topoisomerase 3-alpha, partial [Cajanus cajan]
Length = 887
Score = 72.4 bits (176), Expect = 1e-12
Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSCRGCNFFKWEDSIQSTTTAPTRNQATGRG-- 228
A+V C +C L+TANT NNRGRKFYSC+ CNFF WEDS+ T R+ +GRG
Sbjct: 768 ASVSCSSCGTPCVLRTANTANNRGRKFYSCQECNFFVWEDSLNDGTGG--RSVTSGRGSN 825
Query: 229 ---RCTGNSRGGRQSNRAGNRTDS 291
GGR S G R+ S
Sbjct: 826 SIPASNPRGNGGRGSRGRGGRSGS 849
>XP_013616695.1 PREDICTED: DNA topoisomerase 3-alpha [Brassica oleracea var.
oleracea]
Length = 921
Score = 72.4 bits (176), Expect = 1e-12
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +1
Query: 61 VVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQS-TTTAPTRNQATGRGR 231
V C TC ++TANTE NRGRKFYSC +GCNFF WEDSI + T A + + G GR
Sbjct: 805 VSCTTCGTPCAIRTANTEANRGRKFYSCPSQGCNFFTWEDSISNGTGNATIGSNSGGSGR 864
Query: 232 CTGNSRGGRQSNRAGNR 282
RGG + NR G +
Sbjct: 865 ---RGRGGGRGNRGGGQ 878
>CDY39837.1 BnaC02g42810D [Brassica napus]
Length = 924
Score = 72.4 bits (176), Expect = 1e-12
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +1
Query: 61 VVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQS-TTTAPTRNQATGRGR 231
V C TC ++TANTE NRGRKFYSC +GCNFF WEDSI + T A + + G GR
Sbjct: 808 VSCTTCGTPCAIRTANTEANRGRKFYSCPSQGCNFFTWEDSISNGTGNATIGSNSGGSGR 867
Query: 232 CTGNSRGGRQSNRAGNR 282
RGG + NR G +
Sbjct: 868 ---RGRGGGRGNRGGGQ 881
>OAO94111.1 TOP3A [Arabidopsis thaliana]
Length = 926
Score = 72.4 bits (176), Expect = 1e-12
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQSTT---TAPTRNQAT 219
+ V C TC + L+TANTE NRGR+F+SC +GC+FF WEDSI +++ T + + +
Sbjct: 802 STVSCNTCGSQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDSINNSSGNATTGSNSGGS 861
Query: 220 GRGRCTGNSRGGRQSNRAGNRTDS 291
GR G RGGR +G R S
Sbjct: 862 GRRGSRGRGRGGRGGQSSGGRRGS 885
>NP_201197.1 topoisomerase 3alpha [Arabidopsis thaliana] Q9LVP1.1 RecName:
Full=DNA topoisomerase 3-alpha BAA96895.1 DNA
topoisomerase III [Arabidopsis thaliana] ACA50279.1
topoisomerase 3 alpha [Arabidopsis thaliana] AED97816.1
topoisomerase 3alpha [Arabidopsis thaliana]
Length = 926
Score = 72.4 bits (176), Expect = 1e-12
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQSTT---TAPTRNQAT 219
+ V C TC + L+TANTE NRGR+F+SC +GC+FF WEDSI +++ T + + +
Sbjct: 802 STVSCNTCGSQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDSINNSSGNATTGSNSGGS 861
Query: 220 GRGRCTGNSRGGRQSNRAGNRTDS 291
GR G RGGR +G R S
Sbjct: 862 GRRGSRGRGRGGRGGQSSGGRRGS 885
>XP_011629125.1 PREDICTED: DNA topoisomerase 3-alpha [Amborella trichopoda]
Length = 907
Score = 72.0 bits (175), Expect = 1e-12
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQSTTTAPTR---NQAT 219
A+V+CE+CQ ++TANTENNRGR+FY C + CNFF WED+I S +R N+++
Sbjct: 795 ADVLCESCQMPCTVRTANTENNRGRRFYKCDRQECNFFIWEDAIGSGNRGASRVNGNRSS 854
Query: 220 GRGRCTGNSRGGRQSNRAGNRT 285
RG G R GR+ R+G T
Sbjct: 855 VRGGQAGRGR-GRRGARSGAAT 875
>ERM96738.1 hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
Length = 988
Score = 72.0 bits (175), Expect = 1e-12
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQSTTTAPTR---NQAT 219
A+V+CE+CQ ++TANTENNRGR+FY C + CNFF WED+I S +R N+++
Sbjct: 876 ADVLCESCQMPCTVRTANTENNRGRRFYKCDRQECNFFIWEDAIGSGNRGASRVNGNRSS 935
Query: 220 GRGRCTGNSRGGRQSNRAGNRT 285
RG G R GR+ R+G T
Sbjct: 936 VRGGQAGRGR-GRRGARSGAAT 956
>XP_018434910.1 PREDICTED: DNA topoisomerase 3-alpha [Raphanus sativus]
Length = 927
Score = 71.6 bits (174), Expect = 2e-12
Identities = 44/86 (51%), Positives = 50/86 (58%), Gaps = 11/86 (12%)
Frame = +1
Query: 61 VVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQSTTTAPTRNQATG---- 222
V C TC ++TANTE NRGRKF+SC +GCNFF WEDSI + T T +G
Sbjct: 805 VSCTTCGTPCPIRTANTEANRGRKFFSCPTQGCNFFTWEDSISNGTGNATTGSNSGGSGR 864
Query: 223 RGRCTG---NSRGGRQS--NRAGNRT 285
RGR G SRGG QS RAG T
Sbjct: 865 RGRGRGRGRESRGGGQSGGGRAGGGT 890
>XP_010484154.1 PREDICTED: DNA topoisomerase 3-alpha-like [Camelina sativa]
Length = 920
Score = 71.2 bits (173), Expect = 2e-12
Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSI-QSTTTAPTRNQATGR 225
+ V C TC L+TA+TE NRGRKF+SC +GC+FF WEDSI S+ A T + ++G
Sbjct: 802 STVSCNTCGAPCVLRTASTEANRGRKFFSCQTQGCSFFAWEDSISNSSGNATTWSNSSGS 861
Query: 226 GR--CTGNSRGGRQSNRAGNRTDS 291
GR G RGGR G R S
Sbjct: 862 GRRGSRGRGRGGRGGQSGGGRRGS 885
>XP_012857604.1 PREDICTED: DNA topoisomerase 3-alpha [Erythranthe guttata] EYU20574.1
hypothetical protein MIMGU_mgv1a000984mg [Erythranthe
guttata]
Length = 923
Score = 71.2 bits (173), Expect = 2e-12
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Frame = +1
Query: 55 ANVVCETCQNTLELQTANTENNRGRKFYSC--RGCNFFKWEDSIQSTTTAPTRNQATGRG 228
+++ C +C + L+TANTE N+GRKFYSC +GC+FF WED+I S TA GR
Sbjct: 811 SSIPCTSCGASCNLRTANTEANKGRKFYSCQAQGCSFFVWEDNINSGGTA--ARGGGGRS 868
Query: 229 RCTGNSRGGR-QSNRAGNRTD 288
T + RGGR + +R G RT+
Sbjct: 869 ASTTSRRGGRGRGSRGGGRTN 889