BLASTX nr result

ID: Ephedra29_contig00025855 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025855
         (341 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABY60374.1 At1g04410-like protein, partial [Arabidopsis lyrata]        50   7e-06
AAA18556.2 putative. similar to cytoplasmic malate dehydrogenase...    50   9e-06

>ABY60374.1 At1g04410-like protein, partial [Arabidopsis lyrata]
          Length = 78

 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
 Frame = +1

Query: 235 YALVPMIP*GIMLDADQPVMLQMLDMP---DDLNGVKM 339
           YALVPMI  GIML ADQPV+L MLD+P   + LNGVKM
Sbjct: 5   YALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKM 42


>AAA18556.2 putative. similar to cytoplasmic malate dehydrogenases, partial
           [Zea mays]
          Length = 70

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 26/38 (68%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
 Frame = +1

Query: 235 YALVPMIP*GIMLDADQPVMLQMLDMP---DDLNGVKM 339
           YALVPMI  G+ML ADQPV+L MLD+P   + LNGVKM
Sbjct: 16  YALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKM 53


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