BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025823
         (213 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EZY42791.1 hypothetical protein V052_02628, partial [Staphylococ...    50   1e-06
ENW76859.1 hypothetical protein F911_00700, partial [Acinetobact...    48   4e-06
JAN94735.1 daphnid bacterial-ribosomal-RNA-like, possible HGT [D...    49   6e-06
CDW93820.1 hypothetical protein THICB2_410075 [Thiomonas sp. CB2]      39   1e-05

>EZY42791.1 hypothetical protein V052_02628, partial [Staphylococcus aureus
           MSSA-93] EZY42792.1 hypothetical protein V052_02627,
           partial [Staphylococcus aureus MSSA-93]
          Length = 74

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 24/38 (63%), Positives = 26/38 (68%)
 Frame = +2

Query: 11  ANLLAV*AFPHRFPLSHDFGTLADGLGCFPLHDGR*HP 124
           AN+L V A PH FPL+  FGTLA GLGCFP   G  HP
Sbjct: 1   ANILVVWATPHPFPLNIYFGTLAGGLGCFPFEHGPYHP 38


>ENW76859.1 hypothetical protein F911_00700, partial [Acinetobacter baumannii
           ATCC 19606 = CIP 70.34 = JCM 6841]
          Length = 27

 Score = 48.1 bits (113), Expect = 4e-06
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +2

Query: 35  FPHRFPLSHDFGTLADGLGCFPLHDGR 115
           FPHRFPL++DFG LA GL CFPL  GR
Sbjct: 1   FPHRFPLNYDFGALAGGLDCFPLDYGR 27


>JAN94735.1 daphnid bacterial-ribosomal-RNA-like, possible HGT [Daphnia magna]
          Length = 100

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 27/39 (69%), Positives = 28/39 (71%)
 Frame = +1

Query: 70  DLS*RSGLFPSSRRTLAPAVCLPCSALVGIRSLHRFGKS 186
           DLS RSGLFPS  RTLAP    P  AL+GIRSL  FGKS
Sbjct: 61  DLSWRSGLFPSCVRTLAPGALSPKLALIGIRSLPWFGKS 99


>CDW93820.1 hypothetical protein THICB2_410075 [Thiomonas sp. CB2]
          Length = 59

 Score = 38.5 bits (88), Expect(2) = 1e-05
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -3

Query: 61 MAKWETMWEGLDS*EVGLEA 2
          +AKWET WEG+DS EVGLEA
Sbjct: 37 IAKWETKWEGIDSQEVGLEA 56



 Score = 38.1 bits (87), Expect(2) = 1e-05
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = -2

Query: 137 GRHTAGANVRREEGNNPDRQLRS 69
           G    GANVR +EGNNPDRQLRS
Sbjct: 12  GDSAPGANVRTQEGNNPDRQLRS 34