BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025725
         (287 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011093215.1 PREDICTED: pentatricopeptide repeat-containing pr...    80   2e-15
XP_019191471.1 PREDICTED: pentatricopeptide repeat-containing pr...    79   3e-15
XP_004145716.1 PREDICTED: pentatricopeptide repeat-containing pr...    79   5e-15
EYU34517.1 hypothetical protein MIMGU_mgv1a005767mg [Erythranthe...    77   1e-14
XP_012835655.1 PREDICTED: pentatricopeptide repeat-containing pr...    77   1e-14
XP_008450076.1 PREDICTED: pentatricopeptide repeat-containing pr...    77   1e-14
XP_012840884.1 PREDICTED: pentatricopeptide repeat-containing pr...    77   1e-14
XP_002317747.2 hypothetical protein POPTR_0012s01390g, partial [...    77   2e-14
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...    77   2e-14
CDP11808.1 unnamed protein product [Coffea canephora]                  77   3e-14
GAV85472.1 PPR domain-containing protein/PPR_1 domain-containing...    76   3e-14
KZV40946.1 pentatricopeptide repeat-containing protein [Dorcocer...    76   5e-14
OMP08635.1 ATPase, F1 complex, OSCP/delta subunit [Corchorus oli...    76   5e-14
XP_015886742.1 PREDICTED: pentatricopeptide repeat-containing pr...    74   6e-14
XP_011001914.1 PREDICTED: pentatricopeptide repeat-containing pr...    75   6e-14
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ...    75   8e-14
ERM98263.1 hypothetical protein AMTR_s00221p00020810 [Amborella ...    75   9e-14
XP_010260249.1 PREDICTED: pentatricopeptide repeat-containing pr...    75   9e-14
XP_011620454.1 PREDICTED: pentatricopeptide repeat-containing pr...    75   9e-14
XP_002523294.1 PREDICTED: pentatricopeptide repeat-containing pr...    75   1e-13

>XP_011093215.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Sesamum indicum]
          Length = 539

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 38/95 (40%), Positives = 60/95 (63%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A K+   M + GVE  D+TY+++IE LC + +  EA+ +  +++DK  +   SS LCC V
Sbjct: 284 ATKVMDEMEENGVEPNDVTYSVMIEALCKEKKSGEAVNMVSDMLDKKYI--PSSALCCRV 341

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G+VEEA +LW+ LL K C P + +  TL
Sbjct: 342 IDALCREGKVEEACELWKTLLLKNCTPDNTILSTL 376



 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 29/86 (33%), Positives = 47/86 (54%)
 Frame = +3

Query: 30  DKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVVLGGMCKVGR 209
           D+G     LTY  LI G+CD     EA  L+ +++++      +S    +++ G CK G 
Sbjct: 397 DRGSIPSVLTYNTLIAGMCDSGELCEAGRLWDDMVERG--CPPNSFTYNMLIKGFCKAGH 454

Query: 210 VEEAVKLWEELLDKGCLPHSDVYETL 287
            +E V++ EE+LD+GC P+   Y  L
Sbjct: 455 AKEGVRVLEEMLDRGCSPNEFTYSVL 480


>XP_019191471.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Ipomoea nil] XP_019191472.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial-like [Ipomoea nil]
           XP_019191473.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g16420, mitochondrial-like
           [Ipomoea nil] XP_019191474.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Ipomoea nil] XP_019191475.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial-like [Ipomoea nil]
           XP_019191476.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g16420, mitochondrial-like
           [Ipomoea nil]
          Length = 499

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 37/95 (38%), Positives = 60/95 (63%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+   M + GV+  D+TYA++IE LC+  +  EA+ L  ++++  N +  S  LCC V
Sbjct: 303 AVKVMDEMEENGVKPNDVTYAVMIEALCEGKKSGEAVSLLNDMLE--NRYVPSETLCCRV 360

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  MC+ G+V+EA  LW++LL K C P + +  TL
Sbjct: 361 IDAMCEAGKVQEACDLWKKLLIKNCTPDTTISSTL 395


>XP_004145716.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Cucumis sativus] KGN58196.1 hypothetical
           protein Csa_3G589540 [Cucumis sativus]
          Length = 535

 Score = 78.6 bits (192), Expect = 5e-15
 Identities = 38/95 (40%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+   M + GVE  D+TY ++I G C + +  EAL L  ++++K  +   +S LCC V
Sbjct: 281 AVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYI--PNSALCCKV 338

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C  GRV+EA K+WE+LL K C P + +  TL
Sbjct: 339 IDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTL 373



 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 49/86 (56%)
 Frame = +3

Query: 21  NMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVVLGGMCK 200
           N  ++G     LTY  LI G+C+     EA  L+ ++++K  V  E +    +++ G  K
Sbjct: 391 NEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYN--MLIKGFLK 448

Query: 201 VGRVEEAVKLWEELLDKGCLPHSDVY 278
           VG+ +E +K+ EE+LDKGCL +   Y
Sbjct: 449 VGKAKEVIKVVEEMLDKGCLLNESTY 474


>EYU34517.1 hypothetical protein MIMGU_mgv1a005767mg [Erythranthe guttata]
          Length = 471

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 38/95 (40%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A K+   M + GVE  D+TY+++IE LC +N+  EAL +  ++++K  V   SS LCC V
Sbjct: 293 ATKVMDEMEENGVEPNDVTYSVMIEALCKENKSGEALNMISDMLEKKYV--PSSGLCCRV 350

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G+V++A  LW  LL K C P + +  TL
Sbjct: 351 IDALCREGKVDKACDLWTILLIKNCTPDNAILSTL 385


>XP_012835655.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Erythranthe guttata]
          Length = 521

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 38/95 (40%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A K+   M + GVE  D+TY+++IE LC +N+  EAL +  ++++K  V   SS LCC V
Sbjct: 291 ATKVMDEMEENGVEPNDVTYSVMIEALCKENKSGEALNMISDMLEKKYV--PSSGLCCRV 348

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G+V++A  LW  LL K C P + +  TL
Sbjct: 349 IDALCREGKVDKACDLWTILLIKNCTPDNAILSTL 383



 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 47/86 (54%)
 Frame = +3

Query: 30  DKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVVLGGMCKVGR 209
           D+G     LTY  LI G+CDK    EA  L+  ++++      +S    +++ G CK G 
Sbjct: 404 DRGSIPSVLTYNTLIAGMCDKGELCEAGRLWDCMVERG--CPPNSFTYNLLIKGFCKKGY 461

Query: 210 VEEAVKLWEELLDKGCLPHSDVYETL 287
            +E +++ EE+LDKGC P+   Y  L
Sbjct: 462 AKEGIRVLEEMLDKGCPPNESTYSIL 487


>XP_008450076.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Cucumis melo] XP_008450077.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Cucumis melo]
          Length = 535

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 38/95 (40%), Positives = 58/95 (61%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+   M + GVE  D+TY ++I   C + +  EAL L  ++++K  +   +S LCC V
Sbjct: 281 AVKVMDEMEENGVEPNDVTYGVIILAYCKEEKSGEALNLLNDMLEKKYI--PNSALCCKV 338

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C  GRV+EA KLWE+LL K C P + +  TL
Sbjct: 339 IDVLCSEGRVKEACKLWEKLLKKNCTPDNAITSTL 373



 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 29/78 (37%), Positives = 46/78 (58%)
 Frame = +3

Query: 54  LTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVVLGGMCKVGRVEEAVKLW 233
           LTY  LI G+C+     EA  L+ ++++K  V  E +    +++ G  K+G+ EE +K+ 
Sbjct: 402 LTYNTLIGGMCEIGELCEAARLWDDMLEKGCVPNEFTYN--MLIKGFLKIGKAEEVIKVV 459

Query: 234 EELLDKGCLPHSDVYETL 287
           EE+LDKGCL +   Y  L
Sbjct: 460 EEMLDKGCLLNESTYSLL 477


>XP_012840884.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Erythranthe guttata]
          Length = 562

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 38/95 (40%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A K+   M + GVE  D+TY+++IE LC +N+  EAL +  ++++K  V   SS LCC V
Sbjct: 293 ATKVMDEMEENGVEPNDVTYSVMIEALCKENKSGEALNMISDMLEKKYV--PSSGLCCRV 350

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G+V++A  LW  LL K C P + +  TL
Sbjct: 351 IDALCREGKVDKACDLWTILLIKNCTPDNAILSTL 385



 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 30/86 (34%), Positives = 46/86 (53%)
 Frame = +3

Query: 30  DKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVVLGGMCKVGR 209
           D+G     LTY  LI G+CDK    EA  L+  ++++      +S    +++ G CK G 
Sbjct: 406 DRGSIPSVLTYNTLIAGMCDKGELCEAGRLWDCMVERG--CPPNSFTYNLLIKGFCKKGY 463

Query: 210 VEEAVKLWEELLDKGCLPHSDVYETL 287
             E +++ EE+LDKGC P+   Y  L
Sbjct: 464 TNEGIRVLEEMLDKGCPPNESTYSIL 489


>XP_002317747.2 hypothetical protein POPTR_0012s01390g, partial [Populus
           trichocarpa] EEE95967.2 hypothetical protein
           POPTR_0012s01390g, partial [Populus trichocarpa]
          Length = 515

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 37/95 (38%), Positives = 58/95 (61%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+  NM   GVE  ++TY ++I+  C + +  EA  L  +++DK   F  SS LCC V
Sbjct: 276 AIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDK--KFLPSSTLCCKV 333

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G+VE A  LW+ +L+K CLP + +  TL
Sbjct: 334 IDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTL 368



 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = +3

Query: 54  LTYALLIEGLCDKNRFDEALELFYELIDKW---NVFQESSRLCCVVLGGMCKVGRVEEAV 224
           +TY  LI G+C++   +EA  L+ ++++K    N F  +     +++ G  K G V+E V
Sbjct: 397 MTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYN-----MLIKGFMKAGVVKEGV 451

Query: 225 KLWEELLDKGCLPHSDVYETL 287
           ++ EE+LD GCLP+   Y  L
Sbjct: 452 RILEEMLDNGCLPNKSTYTLL 472


>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
          Length = 460

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 40/98 (40%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKW---NVFQESSRLC 173
           ALK+ + M +KG++   +TY+ LI+GLC   + DEAL+LF E+++K    NV   S+   
Sbjct: 175 ALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYST--- 231

Query: 174 CVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
             ++ G+CK G+++EA+KL+EE+++KG  P+   Y TL
Sbjct: 232 --LIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTL 267



 Score = 75.1 bits (183), Expect = 8e-14
 Identities = 39/98 (39%), Positives = 65/98 (66%), Gaps = 3/98 (3%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKW---NVFQESSRLC 173
           ALK+ + M +KG++   +TY+ LI+GLC   + DEAL+LF E+++K    NV   ++   
Sbjct: 210 ALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNT--- 266

Query: 174 CVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
             ++ G+CK G+++EA+KL+EE+++KG  P    Y TL
Sbjct: 267 --LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 302



 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 37/95 (38%), Positives = 62/95 (65%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           ALK+ + M +KG++   +TY  LI+GLC   + DEAL+LF E+++K    +        +
Sbjct: 140 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYSTL 197

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           + G+CK G+++EA+KL+EE+++KG  P+   Y TL
Sbjct: 198 IDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTL 232



 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 37/95 (38%), Positives = 61/95 (64%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           ALK+ + M +KG++   +TY  LI+GLC   + DEAL+LF E+++K    +        +
Sbjct: 70  ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYNTL 127

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           + G+CK G+++EA+KL+EE+++KG  P    Y TL
Sbjct: 128 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 162



 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 37/95 (38%), Positives = 61/95 (64%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           ALK+ + M +KG++   +TY  LI+GLC   + DEAL+LF E+++K    +        +
Sbjct: 280 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYNTL 337

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           + G+CK G+++EA+KL+EE+++KG  P    Y TL
Sbjct: 338 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 372



 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 36/95 (37%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           AL++   +R +GV    +TY  LI+GLC   + DEAL+LF E+++K    +        +
Sbjct: 35  ALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYNTL 92

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           + G+CK G+++EA+KL+EE+++KG  P    Y TL
Sbjct: 93  IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 127



 Score = 69.7 bits (169), Expect = 7e-12
 Identities = 35/92 (38%), Positives = 59/92 (64%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           ALK+ + M +KG++   +TY  LI+GLC   + DEAL+LF E+++K    +        +
Sbjct: 315 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYNTL 372

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVY 278
           + G+CK G+++EA+KL+EE+++KG  P    Y
Sbjct: 373 IDGLCKAGKLDEALKLFEEMVEKGIKPDELTY 404


>CDP11808.1 unnamed protein product [Coffea canephora]
          Length = 546

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 37/95 (38%), Positives = 60/95 (63%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+  +M + GVE  D+TY ++IE  C + +  EA+ L  +++DK NV   SS LCC +
Sbjct: 319 AIKVMDDMEENGVEPNDVTYGVMIEAFCKEKKSGEAVNLLNDMLDKRNV--PSSALCCKL 376

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C  G+VEEA +LW++L+ K   P + +  TL
Sbjct: 377 IDVLCVEGKVEEASELWKKLMIKNVTPDNAILSTL 411



 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = +3

Query: 30  DKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKW---NVFQESSRLCCVVLGGMCK 200
           +KG    +LTY  LI G+C++    EA  L+ ++++K    N F  +     +++ G C 
Sbjct: 432 EKGSVPSELTYNTLIAGMCERGELSEAARLWDDMVEKRLSPNAFTYN-----MLIKGFCN 486

Query: 201 VGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           VG   E +++ EE+L++GC P+   Y  L
Sbjct: 487 VGNASEGIRVLEEMLERGCSPNESTYSIL 515


>GAV85472.1 PPR domain-containing protein/PPR_1 domain-containing protein/PPR_2
           domain-containing protein [Cephalotus follicularis]
          Length = 536

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 34/95 (35%), Positives = 60/95 (63%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+  +M D GVE  ++TY ++IE  C + +  EA  L  +++++   +  SS LCC V
Sbjct: 282 AIKVMDDMEDNGVEPNEITYGVMIEAFCREKKSGEACNLLDDMLER--KYLPSSALCCKV 339

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G+V++A +LW+ LL K C+P + +  TL
Sbjct: 340 IDVLCEEGKVDDACELWKRLLHKNCMPDNAIVSTL 374



 Score = 52.4 bits (124), Expect = 8e-06
 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
 Frame = +3

Query: 30  DKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKW---NVFQESSRLCCVVLGGMCK 200
           D+G     LTY  LI G+C+     EA  L+ ++++K    N F  +     +++ G C 
Sbjct: 395 DRGSIPSLLTYNTLISGMCENGELSEAGRLWDDMVEKRCAPNAFTYN-----MLIKGFCN 449

Query: 201 VGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +G  +E +++ +E+L+K CLP+   Y  L
Sbjct: 450 IGNAKEGIRILKEMLEKKCLPNRSTYSIL 478


>KZV40946.1 pentatricopeptide repeat-containing protein [Dorcoceras
           hygrometricum]
          Length = 516

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 37/95 (38%), Positives = 57/95 (60%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A K+   M + GVE  D+TY ++IE LC + +   A+ +  E++DK  +   SS LCC +
Sbjct: 290 ATKVMDEMEENGVEPNDVTYGVMIEALCKEKKSGVAVNIVSEMLDKRYI--PSSALCCRL 347

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G+VEEA +LW  LL K C P + +  TL
Sbjct: 348 IDVLCEEGKVEEACELWRTLLTKNCTPDNTISSTL 382


>OMP08635.1 ATPase, F1 complex, OSCP/delta subunit [Corchorus olitorius]
          Length = 817

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 35/95 (36%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+   M + GV+  ++TY ++IE  C + +  EAL LF +++D+  +   SS LCC V
Sbjct: 534 AVKVMDEMEENGVDPNEVTYGVMIEAFCKEKKSGEALNLFDDMLDRKYI--PSSSLCCKV 591

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G+VEE   LW+++L   CLP + +  TL
Sbjct: 592 IDVLCEEGKVEEGCYLWKKMLKNDCLPDNAILSTL 626


>XP_015886742.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Ziziphus jujuba] XP_015886743.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial-like [Ziziphus jujuba]
           XP_015886744.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g16420, mitochondrial-like
           [Ziziphus jujuba] XP_015886745.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Ziziphus jujuba] XP_015886746.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial-like [Ziziphus jujuba]
           XP_015886747.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g16420, mitochondrial-like
           [Ziziphus jujuba] XP_015886748.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Ziziphus jujuba]
          Length = 267

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 35/95 (36%), Positives = 58/95 (61%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+   M + G++  D+TY ++IE  C +++  EAL L  +++ K  +   SS LCC V
Sbjct: 13  AIKVMDEMDENGIDPNDVTYGVMIEAYCKESKSGEALNLLDDMLGKKYI--PSSALCCKV 70

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C  G+VE+A +LW+ LL K C P + +  TL
Sbjct: 71  IDVLCSQGKVEDACELWKRLLKKNCTPDNAITSTL 105



 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = +3

Query: 30  DKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKW---NVFQESSRLCCVVLGGMCK 200
           +KG     LTY  LI G+C+K    EA  L+ ++++K    NVF  +     +++ G C 
Sbjct: 126 EKGSIPSVLTYNTLIAGMCEKGELCEAGRLWDDMVEKGCAPNVFTYN-----MLMKGFCN 180

Query: 201 VGRVEEAVKLWEELLDKGCLPHSDVYETL 287
            G+ EE +++ EE++ KGC P+   Y  L
Sbjct: 181 FGKAEEGIRILEEMIGKGCFPNKTTYNML 209


>XP_011001914.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Populus euphratica] XP_011001915.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial [Populus euphratica]
           XP_011001916.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g16420, mitochondrial
           [Populus euphratica]
          Length = 545

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 37/95 (38%), Positives = 57/95 (60%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K   NM   GVE  ++TY ++I+  C + +  EA  L  +++DK   F  SS LCC V
Sbjct: 291 AIKAMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDK--KFLPSSTLCCKV 348

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G+VE A  LW+ +L+K CLP + +  TL
Sbjct: 349 IDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTL 383



 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 27/78 (34%), Positives = 47/78 (60%)
 Frame = +3

Query: 54  LTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVVLGGMCKVGRVEEAVKLW 233
           +TY  LI G+C++   +EA  L+ ++++K    + S+    +++ G  K G V+E V++ 
Sbjct: 412 MTYNTLIAGMCERGELNEAGRLWDDMVEKR--CRPSAFTYNMLIKGFMKAGNVKEGVRIL 469

Query: 234 EELLDKGCLPHSDVYETL 287
           EE+LD GCLP+   Y  L
Sbjct: 470 EEMLDDGCLPNKSTYNLL 487


>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
          Length = 460

 Score = 75.1 bits (183), Expect = 8e-14
 Identities = 38/95 (40%), Positives = 62/95 (65%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           ALK+ + M +KG++   +TY  LI+GLC   + DEAL+LF E+++K    + S      +
Sbjct: 210 ALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPSVVTYNTL 267

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           + G+CK G+++EA+KL+EE+++KG  P    Y TL
Sbjct: 268 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 302



 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 37/95 (38%), Positives = 61/95 (64%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           ALK+ + M +KG++   +TY  LI+GLC   + DEAL+LF E+++K    +        +
Sbjct: 70  ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYNTL 127

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           + G+CK G+++EA+KL+EE+++KG  P    Y TL
Sbjct: 128 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 162



 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 37/95 (38%), Positives = 61/95 (64%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           ALK+ + M +KG++   +TY  LI+GLC   + DEAL+LF E+++K    +        +
Sbjct: 140 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYNTL 197

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           + G+CK G+++EA+KL+EE+++KG  P    Y TL
Sbjct: 198 IDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTL 232



 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 37/95 (38%), Positives = 61/95 (64%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           ALK+ + M +KG++   +TY  LI+GLC   + DEAL+LF E+++K    +        +
Sbjct: 280 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYNTL 337

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           + G+CK G+++EA+KL+EE+++KG  P    Y TL
Sbjct: 338 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 372



 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 36/95 (37%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           AL++   +R +GV    +TY  LI+GLC   + DEAL+LF E+++K    +        +
Sbjct: 35  ALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYNTL 92

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           + G+CK G+++EA+KL+EE+++KG  P    Y TL
Sbjct: 93  IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 127



 Score = 69.7 bits (169), Expect = 7e-12
 Identities = 35/92 (38%), Positives = 59/92 (64%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           ALK+ + M +KG++   +TY  LI+GLC   + DEAL+LF E+++K    +        +
Sbjct: 315 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYNTL 372

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVY 278
           + G+CK G+++EA+KL+EE+++KG  P    Y
Sbjct: 373 IDGLCKAGKLDEALKLFEEMVEKGIKPDELTY 404


>ERM98263.1 hypothetical protein AMTR_s00221p00020810 [Amborella trichopoda]
          Length = 549

 Score = 75.1 bits (183), Expect = 9e-14
 Identities = 36/95 (37%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+  +M + GV   D+TY ++IE  C + R  EAL L  E+++K   F   S LCC +
Sbjct: 297 AVKLMDDMEENGVLPNDVTYGVVIESYCKEGRSGEALSLLNEMLEK--KFIPCSTLCCKI 354

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+  +V+EA  LW++LL + C+P + +Y TL
Sbjct: 355 VDLLCQESKVDEACVLWKKLLKRNCIPDNAIYSTL 389


>XP_010260249.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Nelumbo nucifera]
          Length = 555

 Score = 75.1 bits (183), Expect = 9e-14
 Identities = 36/95 (37%), Positives = 60/95 (63%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+KI  +M + GV+  ++TY ++IE  C + +  EAL L  ++++K   F  SS LCC V
Sbjct: 299 AVKIMDDMEENGVDPNEVTYGVMIEAFCKEKKSGEALNLLDDMLEK--KFIPSSSLCCKV 356

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G+VE+A  +W++LL K C P + +  TL
Sbjct: 357 IDVLCEEGKVEDACVVWKKLLKKNCTPDNAISSTL 391



 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = +3

Query: 54  LTYALLIEGLCDKNRFDEALELFYELIDKW---NVFQESSRLCCVVLGGMCKVGRVEEAV 224
           LTY  LI G+C++    EA  L+ +++DK    N F  +     +++ G C VG+  E V
Sbjct: 420 LTYNTLISGMCERGELQEAGRLWDDMVDKGCSPNAFTYN-----MLIKGFCTVGKAREGV 474

Query: 225 KLWEELLDKGCLPHSDVYETL 287
           ++ EE+LDKGC+P+   Y  L
Sbjct: 475 RVLEEMLDKGCIPNKSTYSIL 495


>XP_011620454.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Amborella trichopoda]
          Length = 900

 Score = 75.1 bits (183), Expect = 9e-14
 Identities = 36/95 (37%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+  +M + GV   D+TY ++IE  C + R  EAL L  E+++K   F   S LCC +
Sbjct: 297 AVKLMDDMEENGVLPNDVTYGVVIESYCKEGRSGEALSLLNEMLEK--KFIPCSTLCCKI 354

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+  +V+EA  LW++LL + C+P + +Y TL
Sbjct: 355 VDLLCQESKVDEACVLWKKLLKRNCIPDNAIYSTL 389


>XP_002523294.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Ricinus communis] EEF39010.1
           pentatricopeptide repeat-containing protein, putative
           [Ricinus communis]
          Length = 544

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 33/95 (34%), Positives = 60/95 (63%)
 Frame = +3

Query: 3   ALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVV 182
           A+K+  +M + GVE  ++TY +++E  C + +  EA  L  +++++  V   SS LCC V
Sbjct: 290 AIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYV--PSSALCCKV 347

Query: 183 LGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETL 287
           +  +C+ G++EEA +LW+ +L K C+P + +  TL
Sbjct: 348 IDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTL 382



 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 24/78 (30%), Positives = 47/78 (60%)
 Frame = +3

Query: 54  LTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCCVVLGGMCKVGRVEEAVKLW 233
           LTY  LI G+C+K    EA +L+ ++++K   ++ ++    +++ G  K+G  +E +++ 
Sbjct: 411 LTYNTLIAGMCEKGELSEAGKLWDDMMEKG--YKPNAFTYNMLIKGFSKIGNAKEGIRIL 468

Query: 234 EELLDKGCLPHSDVYETL 287
           EE+LD  C+P+   Y  L
Sbjct: 469 EEMLDNRCMPNKSTYAIL 486