BLASTX nr result

ID: Ephedra29_contig00025673 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025673
         (347 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAE29597.1 hypothetical protein AXG93_4003s1180 [Marchantia poly...    79   8e-15
XP_001767331.1 predicted protein [Physcomitrella patens] EDQ6782...    72   2e-12
KYM98502.1 Putative nuclease HARBI1 [Cyphomyrmex costatus]             54   6e-06

>OAE29597.1 hypothetical protein AXG93_4003s1180 [Marchantia polymorpha subsp.
           polymorpha]
          Length = 474

 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
 Frame = +1

Query: 1   WNIVQNQVWKGEPRYLDMLYTRYYKMRYSLFEALLASIQPYIHNSTTAQYVREPVQAEKA 180
           W++VQ + W  + R  D  +   Y+M Y  F+ LL  + P+I  S     VR+P++ ++A
Sbjct: 45  WDMVQERTWSTDERVRDSHWHAQYRMSYRAFQTLLGELTPFIERSNNT--VRDPIEIDRA 102

Query: 181 LCLALHRFGHGTSTFILSELYCVGESTVKKYTSIIINIIV--EHLQNKYIVTPSGPR 345
           + + LHR   G     +S LY VG STV +YT  I +I+     L +K++  P+G +
Sbjct: 103 VAMVLHRLAFGLPPSTISNLYNVGPSTVTEYTKQITDILASKNKLYSKFVCIPTGTK 159


>XP_001767331.1 predicted protein [Physcomitrella patens] EDQ67822.1 predicted
           protein, partial [Physcomitrella patens]
          Length = 298

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
 Frame = +1

Query: 1   WNIVQNQVWKGEPRYLDMLYTRYYKMRYSLFEALLASIQPYIHNSTTAQYVREPVQAEKA 180
           W  +  +V    P   +  + ++ +M Y  F  L+  ++PY+     AQ VREPV+ E A
Sbjct: 79  WRRLNKRVGVLNPMMQEKQWIKHCRMSYPAFVYLVEELRPYM--LPNAQMVREPVELELA 136

Query: 181 LCLALHRFGHGTSTFILSELYCVGESTVKKYTSIIINIIV--EHLQNKYIVTPSGPR 345
           + + L+R   G S  ++  L+ VG +TV KYT ++ +I    E L +KYIV P+G R
Sbjct: 137 VAIVLNRLASGASPAVIGNLWGVGTATVVKYTKLVTSIFASCEKLYSKYIVAPTGER 193


>KYM98502.1 Putative nuclease HARBI1 [Cyphomyrmex costatus]
          Length = 434

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 32/92 (34%), Positives = 44/92 (47%)
 Frame = +1

Query: 49  DMLYTRYYKMRYSLFEALLASIQPYIHNSTTAQYVREPVQAEKALCLALHRFGHGTSTFI 228
           D  +  Y++M  + FE LL  I P+I   T    +REP+ AE+ LC+ L     G S   
Sbjct: 76  DSRFRNYFRMSVTQFEELLCMIAPFITKQTV---IREPISAEERLCMTLRFLASGDSMTS 132

Query: 229 LSELYCVGESTVKKYTSIIINIIVEHLQNKYI 324
           +S  Y VG +TV K      N I   L  K +
Sbjct: 133 ISYQYLVGLTTVSKIIEETCNTIWNCLVKKVL 164


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