BLASTX nr result
ID: Ephedra29_contig00025650
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00025650
(240 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_003604256.2 PPR containing plant-like protein [Medicago trunc... 70 4e-12
XP_015871387.1 PREDICTED: pentatricopeptide repeat-containing pr... 70 4e-12
XP_015869117.1 PREDICTED: pentatricopeptide repeat-containing pr... 70 4e-12
XP_009139068.1 PREDICTED: pentatricopeptide repeat-containing pr... 69 5e-12
KZV43674.1 pentatricopeptide repeat-containing protein chloropla... 69 8e-12
KZV36779.1 pentatricopeptide repeat-containing protein chloropla... 65 9e-12
XP_012574162.1 PREDICTED: pentatricopeptide repeat-containing pr... 69 9e-12
XP_018472398.1 PREDICTED: pentatricopeptide repeat-containing pr... 68 1e-11
XP_018459285.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide... 68 1e-11
XP_002867617.1 hypothetical protein ARALYDRAFT_354257 [Arabidops... 68 2e-11
XP_013599657.1 PREDICTED: pentatricopeptide repeat-containing pr... 67 2e-11
XP_013740191.1 PREDICTED: pentatricopeptide repeat-containing pr... 67 2e-11
CDX94462.1 BnaC01g17220D [Brassica napus] 67 2e-11
OAY34105.1 hypothetical protein MANES_13G150300 [Manihot esculenta] 67 2e-11
XP_010934285.1 PREDICTED: pentatricopeptide repeat-containing pr... 67 2e-11
XP_016184871.1 PREDICTED: pentatricopeptide repeat-containing pr... 67 3e-11
XP_011624831.1 PREDICTED: putative pentatricopeptide repeat-cont... 67 5e-11
XP_011629339.1 PREDICTED: pentatricopeptide repeat-containing pr... 66 6e-11
XP_009357088.1 PREDICTED: pentatricopeptide repeat-containing pr... 66 6e-11
JAU94404.1 Pentatricopeptide repeat-containing protein, chloropl... 66 8e-11
>XP_003604256.2 PPR containing plant-like protein [Medicago truncatula] AES86453.2
PPR containing plant-like protein [Medicago truncatula]
Length = 595
Score = 69.7 bits (169), Expect = 4e-12
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +2
Query: 23 DCSPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEVQ--LIEMYAKCSDPNSA 196
D +P+ TF ++ ACG LGCLN G GIH V K+ K + V L++MY KC A
Sbjct: 202 DVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDA 261
Query: 197 KSIFDQISPKDVVS 238
K +FD+I KD+VS
Sbjct: 262 KRLFDEIPEKDIVS 275
>XP_015871387.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
chloroplastic-like [Ziziphus jujuba]
Length = 625
Score = 69.7 bits (169), Expect = 4e-12
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 RKMREIGDCSPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEVQ--LIEMYAK 175
+KMRE PD TF ++ +AC LG L+ G+ IHA ++K GFS N +Q LI MYA+
Sbjct: 40 KKMRE-NSVRPDEFTFPSILKACSRLGALHEGEQIHAQIMKCGFSSNGFIQNTLIHMYAR 98
Query: 176 CSDPNSAKSIFDQISPKDV 232
C + A+ +FD IS KDV
Sbjct: 99 CGELEVARHVFDGISQKDV 117
>XP_015869117.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
chloroplastic-like [Ziziphus jujuba] XP_015869668.1
PREDICTED: pentatricopeptide repeat-containing protein
At1g08070, chloroplastic-like [Ziziphus jujuba]
XP_015869822.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g08070, chloroplastic-like
[Ziziphus jujuba] XP_015870394.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g08070,
chloroplastic-like [Ziziphus jujuba] XP_015870418.1
PREDICTED: pentatricopeptide repeat-containing protein
At1g08070, chloroplastic-like [Ziziphus jujuba]
XP_015870422.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g08070, chloroplastic-like
[Ziziphus jujuba] XP_015870572.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g08070,
chloroplastic-like [Ziziphus jujuba] XP_015870715.1
PREDICTED: pentatricopeptide repeat-containing protein
At1g08070, chloroplastic-like [Ziziphus jujuba]
XP_015871451.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g08070, chloroplastic-like
[Ziziphus jujuba]
Length = 700
Score = 69.7 bits (169), Expect = 4e-12
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 RKMREIGDCSPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEVQ--LIEMYAK 175
+KMRE PD TF ++ +AC LG L+ G+ IHA ++K GFS N +Q LI MYA+
Sbjct: 115 KKMRE-NSVRPDEFTFPSILKACSRLGALHEGEQIHAQIMKCGFSSNGFIQNTLIHMYAR 173
Query: 176 CSDPNSAKSIFDQISPKDV 232
C + A+ +FD IS KDV
Sbjct: 174 CGELEVARHVFDGISQKDV 192
>XP_009139068.1 PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic [Brassica rapa] XP_009139076.1 PREDICTED:
pentatricopeptide repeat-containing protein At4g25270,
chloroplastic [Brassica rapa]
Length = 528
Score = 69.3 bits (168), Expect = 5e-12
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 PDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEV--QLIEMYAKCSDPNSAKSI 205
PD TF V +ACG +G + G+ IH D++K GF +V V L++MYAKC D AKS+
Sbjct: 194 PDRFTFPRVLKACGGIGSIQIGEAIHRDLVKEGFGYDVYVLNALVDMYAKCGDIVKAKSV 253
Query: 206 FDQISPKDVVS 238
FD I KD VS
Sbjct: 254 FDMIPHKDYVS 264
>KZV43674.1 pentatricopeptide repeat-containing protein chloroplastic
[Dorcoceras hygrometricum]
Length = 376
Score = 68.6 bits (166), Expect = 8e-12
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +2
Query: 23 DCSPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEV--QLIEMYAKCSDPNSA 196
D PD TF V +ACG +G + G+ IH VI+FGF + V L++MYAKC D A
Sbjct: 38 DMEPDEYTFPRVLKACGGVGMIQVGEEIHRHVIRFGFGNDTFVLNSLVDMYAKCGDIVKA 97
Query: 197 KSIFDQISPKDVVS 238
+ +FD+I+ KD+VS
Sbjct: 98 RHLFDRINDKDLVS 111
>KZV36779.1 pentatricopeptide repeat-containing protein chloroplastic
[Dorcoceras hygrometricum]
Length = 122
Score = 65.1 bits (157), Expect = 9e-12
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +2
Query: 23 DCSPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEV--QLIEMYAKCSDPNSA 196
D PD TF V +ACG +G + G+ IH VI+FGF + V L++MY KC D A
Sbjct: 37 DVEPDEYTFPRVLKACGGVGMIQVGEEIHRHVIRFGFGNDTFVLNSLVDMYDKCGDIVKA 96
Query: 197 KSIFDQISPKDVVS 238
+ +FD+I KD+VS
Sbjct: 97 RYMFDRIDDKDLVS 110
>XP_012574162.1 PREDICTED: pentatricopeptide repeat-containing protein At4g38010
[Cicer arietinum]
Length = 587
Score = 68.6 bits (166), Expect = 9e-12
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = +2
Query: 23 DCSPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEVQ--LIEMYAKCSDPNSA 196
D P++ TF ++ ACG LGCLN G GIH V K+ K + V LI+MY KC A
Sbjct: 202 DVEPNVATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELAVSNTLIDMYMKCESVTDA 261
Query: 197 KSIFDQISPKDVVS 238
K +F +I KD+VS
Sbjct: 262 KRLFHEIPEKDIVS 275
>XP_018472398.1 PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Raphanus sativus] XP_018472399.1
PREDICTED: pentatricopeptide repeat-containing protein
At4g25270, chloroplastic-like [Raphanus sativus]
Length = 526
Score = 68.2 bits (165), Expect = 1e-11
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 PDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEV--QLIEMYAKCSDPNSAKSI 205
PD TF V +ACG +G + G+ IH D++K GF ++V V L++MYAKC D A+++
Sbjct: 191 PDRFTFPRVLKACGGIGSIQIGEAIHRDLVKEGFGQDVYVLNALVDMYAKCGDIVKARNV 250
Query: 206 FDQISPKDVVS 238
FD I KD VS
Sbjct: 251 FDMIPHKDYVS 261
>XP_018459285.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g25270, chloroplastic-like [Raphanus sativus]
Length = 526
Score = 68.2 bits (165), Expect = 1e-11
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 PDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEV--QLIEMYAKCSDPNSAKSI 205
PD TF V +ACG +G + G+ IH D++K GF ++V V L++MYAKC D A+++
Sbjct: 191 PDRFTFPRVLKACGGIGSIQIGEAIHRDLVKEGFGQDVYVLNALVDMYAKCGDIVKARNV 250
Query: 206 FDQISPKDVVS 238
FD I KD VS
Sbjct: 251 FDMIPHKDYVS 261
>XP_002867617.1 hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
lyrata] EFH43876.1 hypothetical protein
ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata]
Length = 758
Score = 67.8 bits (164), Expect = 2e-11
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 PDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEV--QLIEMYAKCSDPNSAKSI 205
PD TF V +ACG +G + G+ IH D++K GF +V V L++MYAKC D A+++
Sbjct: 424 PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKAGFGYDVHVLNALVDMYAKCGDIVKARNV 483
Query: 206 FDQISPKDVVS 238
FD I KD VS
Sbjct: 484 FDMIPNKDYVS 494
>XP_013599657.1 PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic [Brassica oleracea var. oleracea]
Length = 526
Score = 67.4 bits (163), Expect = 2e-11
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 PDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEV--QLIEMYAKCSDPNSAKSI 205
PD TF V +ACG +G + G+ IH D++K GF +V V L++MYAKC D A+++
Sbjct: 192 PDRFTFPRVLKACGGIGSIQIGEAIHRDLVKEGFGHDVYVLNALVDMYAKCGDIVKARNV 251
Query: 206 FDQISPKDVVS 238
FD I KD VS
Sbjct: 252 FDMIPHKDYVS 262
>XP_013740191.1 PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic [Brassica napus] XP_013736647.1 PREDICTED:
pentatricopeptide repeat-containing protein At4g25270,
chloroplastic [Brassica napus] CDX89428.1 BnaA01g14650D
[Brassica napus]
Length = 527
Score = 67.4 bits (163), Expect = 2e-11
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 PDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEV--QLIEMYAKCSDPNSAKSI 205
PD TF V +ACG +G + G+ IH D++K GF +V V L++MYAKC D A+++
Sbjct: 193 PDRFTFPRVLKACGGIGSIQIGEAIHRDLVKEGFGHDVYVLNALVDMYAKCGDIVKARNV 252
Query: 206 FDQISPKDVVS 238
FD I KD VS
Sbjct: 253 FDMIPHKDYVS 263
>CDX94462.1 BnaC01g17220D [Brassica napus]
Length = 527
Score = 67.4 bits (163), Expect = 2e-11
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 PDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEV--QLIEMYAKCSDPNSAKSI 205
PD TF V +ACG +G + G+ IH D++K GF +V V L++MYAKC D A+++
Sbjct: 193 PDRFTFPRVLKACGGIGSIQIGEAIHRDLVKEGFGHDVYVLNALVDMYAKCGDIVKARNV 252
Query: 206 FDQISPKDVVS 238
FD I KD VS
Sbjct: 253 FDMIPHKDYVS 263
>OAY34105.1 hypothetical protein MANES_13G150300 [Manihot esculenta]
Length = 623
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +2
Query: 11 REIGDCSPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEVQ--LIEMYAKCSD 184
R+IG +PD TF TV ACG+LG L G +HA VI GFS NV V+ L++MY KC
Sbjct: 253 RKIG-LTPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGFSGNVVVESSLVDMYGKCGL 311
Query: 185 PNSAKSIFDQISPKDVVS 238
N ++ +FD++S K+ VS
Sbjct: 312 VNESQRVFDRMSIKNSVS 329
>XP_010934285.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Elaeis guineensis] XP_010934286.1
PREDICTED: pentatricopeptide repeat-containing protein
At3g09040, mitochondrial [Elaeis guineensis]
XP_010934287.1 PREDICTED: pentatricopeptide
repeat-containing protein At3g09040, mitochondrial
[Elaeis guineensis] XP_010934288.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Elaeis guineensis] XP_019709140.1
PREDICTED: pentatricopeptide repeat-containing protein
At3g09040, mitochondrial [Elaeis guineensis]
Length = 1040
Score = 67.4 bits (163), Expect = 2e-11
Identities = 39/81 (48%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 2 RKMREIGDCSPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKN--VEVQLIEMYAK 175
R MR G SPD FA V AC L LNYG IH DVIK GF N E LI+MY+K
Sbjct: 160 RSMRCSG-ASPDQFGFAIVLSACARLAALNYGRQIHCDVIKSGFETNSFCEGSLIDMYSK 218
Query: 176 CSDPNSAKSIFDQISPKDVVS 238
C+ A+ +FD I+ D +S
Sbjct: 219 CNHVADARRVFDGIANPDTIS 239
>XP_016184871.1 PREDICTED: pentatricopeptide repeat-containing protein At4g38010
[Arachis ipaensis]
Length = 589
Score = 67.0 bits (162), Expect = 3e-11
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +2
Query: 23 DCSPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEVQ--LIEMYAKCSDPNSA 196
D P+L T ++ ACG LGCLN G G+H V+K + K + V L++MY KC A
Sbjct: 202 DVEPNLATIVSILGACGKLGCLNLGKGVHGLVVKCPYGKELVVDNALMDMYMKCESVADA 261
Query: 197 KSIFDQISPKDVVS 238
+ +FD++ KD++S
Sbjct: 262 RQVFDEMPEKDIIS 275
>XP_011624831.1 PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142 [Amborella trichopoda]
Length = 642
Score = 66.6 bits (161), Expect = 5e-11
Identities = 31/71 (43%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 PDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKN--VEVQLIEMYAKCSDPNSAKSI 205
PD++TFA+V ACGHL L G +H+ +I GF +N +E L++MY+KC + +A+ +
Sbjct: 268 PDVVTFASVLPACGHLSALAQGKLLHSSIIVNGFRENMFLENALVDMYSKCGNLKAARDV 327
Query: 206 FDQISPKDVVS 238
FD++S +DVV+
Sbjct: 328 FDRMSCRDVVT 338
>XP_011629339.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Amborella trichopoda]
Length = 551
Score = 66.2 bits (160), Expect = 6e-11
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = +2
Query: 5 KMREIGDCSPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEVQ--LIEMYAKC 178
+MR+IG PD T+ V +ACG + L YG IHA ++KFGF NV VQ LI MY++C
Sbjct: 68 QMRKIG-VLPDNYTYPFVLKACGLIKYLQYGSKIHAHMLKFGFRSNVIVQNALINMYSRC 126
Query: 179 SDPNSAKSIFDQISPKDVVS 238
+ A+ +FD+I +++VS
Sbjct: 127 NATAIARQVFDEIHGRNIVS 146
>XP_009357088.1 PREDICTED: pentatricopeptide repeat-containing protein At1g03540
[Pyrus x bretschneideri]
Length = 628
Score = 66.2 bits (160), Expect = 6e-11
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = +2
Query: 29 SPDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEVQ--LIEMYAKCSDPNSAKS 202
SPD TF TV ACG+LG L G +HA VI +G NV V+ L++MY KC +A+
Sbjct: 259 SPDGFTFGTVLTACGNLGRLRQGREVHAKVITYGLYGNVVVESSLVDMYGKCGSVENARR 318
Query: 203 IFDQISPKDVVS 238
+FD++S K+ VS
Sbjct: 319 VFDRMSKKNSVS 330
>JAU94404.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial
[Noccaea caerulescens]
Length = 370
Score = 65.9 bits (159), Expect = 8e-11
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 PDLLTFATVSEACGHLGCLNYGDGIHADVIKFGFSKNVEV--QLIEMYAKCSDPNSAKSI 205
PD TF V +ACG +G + G+ IH D++K GF +V V L++MYAKC D +++
Sbjct: 192 PDRFTFPRVLKACGGIGSIQIGEAIHRDLVKEGFGDDVYVLNALVDMYAKCGDIVKGRNV 251
Query: 206 FDQISPKDVVS 238
FD I KD VS
Sbjct: 252 FDMIPHKDYVS 262