BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025600
         (258 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013466695.1 PPR containing plant-like protein [Medicago trunc...    55   7e-07
XP_006849567.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   9e-07
XP_008451905.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   2e-06
XP_016901180.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   2e-06
XP_010028496.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   2e-06
XP_008444214.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   2e-06
XP_010548044.1 PREDICTED: pentatricopeptide repeat-containing pr...    53   4e-06
XP_018677911.1 PREDICTED: putative pentatricopeptide repeat-cont...    53   4e-06
XP_009419261.1 PREDICTED: pentatricopeptide repeat-containing pr...    53   4e-06
KGN53456.1 hypothetical protein Csa_4G055990 [Cucumis sativus]         52   6e-06
XP_004142707.1 PREDICTED: pentatricopeptide repeat-containing pr...    52   6e-06
XP_004149000.1 PREDICTED: pentatricopeptide repeat-containing pr...    52   6e-06
XP_011461876.1 PREDICTED: pentatricopeptide repeat-containing pr...    52   8e-06

>XP_013466695.1 PPR containing plant-like protein [Medicago truncatula] KEH40736.1
           PPR containing plant-like protein [Medicago truncatula]
          Length = 745

 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
 Frame = +3

Query: 3   NMKQEAIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPH------KCKEVFCHMILTNVD 164
           N+   AI TL++   HG SP + S N +L  +  S  PH      +   VFC M+  NV 
Sbjct: 133 NLIDNAIHTLHLATRHGFSPGVLSYNSILDSIIRSG-PHSLLSIQQANRVFCDMVRNNVS 191

Query: 165 ADSYTFEQIIRSLVNEGKLEEAFMFFHKVE 254
            + YT+  +IR +V+ G+ +    F +++E
Sbjct: 192 PNIYTYNVMIRGMVSVGRFDSGLHFMNEME 221


>XP_006849567.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Amborella trichopoda] ERN11148.1
           hypothetical protein AMTR_s00024p00183850 [Amborella
           trichopoda]
          Length = 633

 Score = 54.7 bits (130), Expect = 9e-07
 Identities = 29/80 (36%), Positives = 41/80 (51%)
 Frame = +3

Query: 15  EAIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILTNVDADSYTFEQII 194
           EA+Q  Y+ K H +SPSI+SCN LLS LS          ++  +    + +   TF  +I
Sbjct: 177 EAVQIFYLMKGHKLSPSIESCNFLLSTLSKQNKTETAWVIYAEIFRLKIPSSIVTFNIMI 236

Query: 195 RSLVNEGKLEEAFMFFHKVE 254
             L  EGKL +A  F   +E
Sbjct: 237 NILCKEGKLNKAKEFLSYME 256


>XP_008451905.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic isoform X2 [Cucumis melo]
          Length = 669

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 30/80 (37%), Positives = 44/80 (55%)
 Frame = +3

Query: 18  AIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILTNVDADSYTFEQIIR 197
           AI   Y+    G  PS+++CN LLS L  +    KC EVF  ++   V  D ++F  +I 
Sbjct: 40  AIDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-QVMSEGVCPDVFSFTNVIN 98

Query: 198 SLVNEGKLEEAFMFFHKVEK 257
           +L   GK+E+A   F K+EK
Sbjct: 99  ALCKGGKMEKATELFMKMEK 118


>XP_016901180.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic isoform X1 [Cucumis melo] XP_016901181.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic isoform X1 [Cucumis melo]
           XP_016901182.1 PREDICTED: pentatricopeptide
           repeat-containing protein At4g19440, chloroplastic
           isoform X1 [Cucumis melo] XP_016901183.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic isoform X1 [Cucumis melo]
          Length = 822

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 30/80 (37%), Positives = 44/80 (55%)
 Frame = +3

Query: 18  AIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILTNVDADSYTFEQIIR 197
           AI   Y+    G  PS+++CN LLS L  +    KC EVF  ++   V  D ++F  +I 
Sbjct: 193 AIDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-QVMSEGVCPDVFSFTNVIN 251

Query: 198 SLVNEGKLEEAFMFFHKVEK 257
           +L   GK+E+A   F K+EK
Sbjct: 252 ALCKGGKMEKATELFMKMEK 271


>XP_010028496.1 PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Eucalyptus grandis] XP_010028498.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g39710
           [Eucalyptus grandis] XP_010028500.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g39710
           [Eucalyptus grandis] XP_010028501.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g39710
           [Eucalyptus grandis] XP_018718588.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g39710
           [Eucalyptus grandis]
          Length = 750

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   NMKQEAIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKC-KEVFCHMILTNVDADSYT 179
           NM  +A++ +   K HG  P + S N +L  +   + P K  +EV+  MI   V  + +T
Sbjct: 146 NMADKALRMVNFAKSHGFMPGVLSYNSILDAMIRCRQPVKLVEEVYGDMIKCGVSPNVFT 205

Query: 180 FEQIIRSLVNEGKLEEAFMFFHKVEK 257
           F  ++R     G LE A  FFH +EK
Sbjct: 206 FNVLMRGFCGAGNLEMALHFFHDMEK 231


>XP_008444214.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Cucumis melo] XP_008444216.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Cucumis melo]
          Length = 757

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +3

Query: 12  QEAIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILT-NVDADSYTFEQ 188
           QE+I+   I K HG+SPS+ + N LL+ L      +  K V+  M+ T  V  D+YTF  
Sbjct: 166 QESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKNVYYEMLSTYGVTPDTYTFNI 225

Query: 189 IIRSLVNEGKLEEAFMFFHKVEK 257
           +IR     G +++ F  F+ + +
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLPR 248


>XP_010548044.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Tarenaya hassleriana]
          Length = 636

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 27/83 (32%), Positives = 42/83 (50%)
 Frame = +3

Query: 6   MKQEAIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILTNVDADSYTFE 185
           M  EA++  Y+ K  G  P IQ+CN +LS LS          ++  M    + +  YT+ 
Sbjct: 174 MADEAVEGFYMMKGKGFVPKIQTCNSILSLLSRLNRTEAAWVIYAEMFRMEIKSSLYTYN 233

Query: 186 QIIRSLVNEGKLEEAFMFFHKVE 254
            +I +L  EGKL++A  F   +E
Sbjct: 234 IMINTLCKEGKLKKAKEFIGCME 256


>XP_018677911.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800 isoform X2 [Musa acuminata subsp. malaccensis]
           XP_018677913.1 PREDICTED: putative pentatricopeptide
           repeat-containing protein At1g13800 isoform X2 [Musa
           acuminata subsp. malaccensis] XP_018677919.1 PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At1g13800 isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 828

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 27/74 (36%), Positives = 44/74 (59%)
 Frame = +3

Query: 6   MKQEAIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILTNVDADSYTFE 185
           M Q+A   L      G  PSI++C+ L+++L+ S +     +VF  M++  +D D+Y F 
Sbjct: 1   MPQQAADALSQLPSLGFVPSIKTCSYLMNYLAESGNLDLVLQVFEKMMMLGIDLDAYAFT 60

Query: 186 QIIRSLVNEGKLEE 227
            +I+SL  EGKL+E
Sbjct: 61  ILIKSLCREGKLDE 74


>XP_009419261.1 PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X1 [Musa acuminata subsp.
           malaccensis] XP_018677909.1 PREDICTED: pentatricopeptide
           repeat-containing protein At2g26790, mitochondrial-like
           isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 996

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 27/74 (36%), Positives = 44/74 (59%)
 Frame = +3

Query: 6   MKQEAIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILTNVDADSYTFE 185
           M Q+A   L      G  PSI++C+ L+++L+ S +     +VF  M++  +D D+Y F 
Sbjct: 169 MPQQAADALSQLPSLGFVPSIKTCSYLMNYLAESGNLDLVLQVFEKMMMLGIDLDAYAFT 228

Query: 186 QIIRSLVNEGKLEE 227
            +I+SL  EGKL+E
Sbjct: 229 ILIKSLCREGKLDE 242


>KGN53456.1 hypothetical protein Csa_4G055990 [Cucumis sativus]
          Length = 710

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 28/80 (35%), Positives = 42/80 (52%)
 Frame = +3

Query: 18  AIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILTNVDADSYTFEQIIR 197
           A+   Y+    G  PS+++CN LLS L  +    KC EVF  ++      D ++F  +I 
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 251

Query: 198 SLVNEGKLEEAFMFFHKVEK 257
           +L   GK+E A   F K+EK
Sbjct: 252 ALCKGGKMENAIELFMKMEK 271


>XP_004142707.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Cucumis sativus] XP_011653773.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic [Cucumis sativus] KGN54533.1
           hypothetical protein Csa_4G358710 [Cucumis sativus]
          Length = 757

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +3

Query: 12  QEAIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILT-NVDADSYTFEQ 188
           QE+I+   I K HG+SPS+ + N LL+ L      +  K+V+  M+ T  V  D++TF  
Sbjct: 166 QESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNI 225

Query: 189 IIRSLVNEGKLEEAFMFFHKVEK 257
           +IR     G +++ F  F+ + +
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLSR 248


>XP_004149000.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Cucumis sativus] XP_011653231.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic [Cucumis sativus]
           XP_011653232.1 PREDICTED: pentatricopeptide
           repeat-containing protein At4g19440, chloroplastic
           [Cucumis sativus] XP_011653233.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Cucumis sativus] XP_011653234.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic [Cucumis sativus]
          Length = 822

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 28/80 (35%), Positives = 42/80 (52%)
 Frame = +3

Query: 18  AIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILTNVDADSYTFEQIIR 197
           A+   Y+    G  PS+++CN LLS L  +    KC EVF  ++      D ++F  +I 
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 251

Query: 198 SLVNEGKLEEAFMFFHKVEK 257
           +L   GK+E A   F K+EK
Sbjct: 252 ALCKGGKMENAIELFMKMEK 271


>XP_011461876.1 PREDICTED: pentatricopeptide repeat-containing protein At5g55840
           [Fragaria vesca subsp. vesca]
          Length = 1128

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 30/84 (35%), Positives = 42/84 (50%)
 Frame = +3

Query: 6   MKQEAIQTLYITKLHGISPSIQSCNMLLSFLSNSQHPHKCKEVFCHMILTNVDADSYTFE 185
           M   A++T Y+  L G  PS  +CNM+L+ L+  +        F  M+  NV  D  TF 
Sbjct: 169 MVGSAVETFYLMGLRGFRPSGCTCNMILASLAKDRRAASVWSFFKEMLAKNVCPDVSTFN 228

Query: 186 QIIRSLVNEGKLEEAFMFFHKVEK 257
            +I  L  EGKL +A     K+EK
Sbjct: 229 ILISVLCVEGKLSKASYLLRKMEK 252