BLASTX nr result

ID: Ephedra29_contig00025569 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025569
         (306 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009399200.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   3e-06

>XP_009399200.1 PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial [Musa acuminata subsp. malaccensis]
           XP_018681411.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g03560, mitochondrial [Musa
           acuminata subsp. malaccensis] XP_018681412.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial [Musa acuminata subsp. malaccensis]
          Length = 640

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 29/58 (50%), Positives = 34/58 (58%)
 Frame = +2

Query: 2   ITGKEREVPERIRLVMLTALRKTGNVDLAWKLVTSRIAADYTXXXXXXXXXXFITLLH 175
           I GK REVP R+R +M+ ALRK GN DLA+KLV S I   Y           F TLL+
Sbjct: 582 IIGKGREVPGRVRTIMINALRKAGNADLAFKLVHSNIGIGYDRYGSIKRRVKFQTLLN 639


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