BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025467
         (231 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010273294.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   2e-11
XP_011623560.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   3e-10
XP_018816431.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   5e-10
XP_015573744.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide...    63   7e-10
CBI15196.3 unnamed protein product, partial [Vitis vinifera]           63   9e-10
XP_002281803.1 PREDICTED: pentatricopeptide repeat-containing pr...    63   9e-10
XP_002303270.2 pentatricopeptide repeat-containing family protei...    63   9e-10
XP_011039995.1 PREDICTED: pentatricopeptide repeat-containing pr...    63   9e-10
XP_010264131.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   1e-09
XP_013444656.1 pentatricopeptide (PPR) repeat protein [Medicago ...    62   1e-09
XP_018470380.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   2e-09
XP_006306315.1 hypothetical protein CARUB_v10012185mg [Capsella ...    62   2e-09
KZM80711.1 hypothetical protein DCAR_032307 [Daucus carota subsp...    62   2e-09
CDP12844.1 unnamed protein product [Coffea canephora]                  62   2e-09
ADE75673.1 unknown [Picea sitchensis]                                  61   2e-09
XP_016652176.1 PREDICTED: putative pentatricopeptide repeat-cont...    61   3e-09
XP_008243706.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   3e-09
XP_011094314.1 PREDICTED: putative pentatricopeptide repeat-cont...    61   3e-09
CAN66661.1 hypothetical protein VITISV_031721, partial [Vitis vi...    61   4e-09
XP_008342860.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   4e-09

>XP_010273294.1 PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic [Nelumbo nucifera]
          Length = 874

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 29/52 (55%), Positives = 37/52 (71%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSDT 158
           GYL++AH  IE MP+KPDP IW ALLNAC+IH+  +L E   R  F  DS++
Sbjct: 648 GYLEDAHEFIEKMPLKPDPAIWGALLNACRIHRKLELGELAARFVFEMDSES 699


>XP_011623560.1 PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Amborella trichopoda]
          Length = 737

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSDT*ATLYCLQ 182
           G+LDEAH LI+ MP KP+ G+W ALL AC+IH NT++ EY  +  FR + +  A  Y L 
Sbjct: 516 GHLDEAHELIKQMPSKPNDGVWGALLGACRIHGNTRIGEYAAQNLFRIEPEH-AGYYVLM 574

Query: 183 RFI-----HLQEGGQMQ 218
             I     H +E G+++
Sbjct: 575 SNIYAASNHWEEVGKLR 591


>XP_018816431.1 PREDICTED: pentatricopeptide repeat-containing protein At1g11290,
           chloroplastic-like [Juglans regia] XP_018816432.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290, chloroplastic-like [Juglans regia]
           XP_018816433.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g11290, chloroplastic-like
           [Juglans regia] XP_018816434.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g11290,
           chloroplastic-like [Juglans regia] XP_018816435.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290, chloroplastic-like [Juglans regia]
          Length = 703

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 33/68 (48%), Positives = 42/68 (61%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSDT*ATLYCLQ 182
           G L+EAH  IE MP+ PD G+W ALL AC+IH N +LAE   ++ FR DSD     Y L 
Sbjct: 482 GRLNEAHDFIERMPMWPDAGVWGALLGACRIHLNVELAEVAAKSLFRLDSDN-TGRYVLL 540

Query: 183 RFIHLQEG 206
             I++  G
Sbjct: 541 SNIYVSSG 548


>XP_015573744.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic [Ricinus communis]
          Length = 884

 Score = 63.2 bits (152), Expect = 7e-10
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSDT 158
           G L EAH  IE MPIKPDP IW ALLNAC++H+   L E+  +  F+ D+++
Sbjct: 654 GKLKEAHEFIEKMPIKPDPAIWGALLNACRMHRQVHLGEFAAQKIFKEDTES 705


>CBI15196.3 unnamed protein product, partial [Vitis vinifera]
          Length = 467

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYV 125
           G+LDEAHRLIE MP+KP+  +W ALL  C+IHKN +LA +V
Sbjct: 323 GFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELASHV 363


>XP_002281803.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 553

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYV 125
           G+LDEAHRLIE MP+KP+  +W ALL  C+IHKN +LA +V
Sbjct: 409 GFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELASHV 449


>XP_002303270.2 pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] EEE78249.2 pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 786

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSDT 158
           G L+EAH  IE MPIKPDP IW ALLNAC+IH++  L E   +  F+ D+++
Sbjct: 564 GKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAES 615


>XP_011039995.1 PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic [Populus euphratica]
          Length = 878

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSDT 158
           G L+EAH  IE MPIKPDP IW ALLNAC+IH++  L E   +  F+ D+++
Sbjct: 656 GKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKEDAES 707


>XP_010264131.1 PREDICTED: pentatricopeptide repeat-containing protein At1g11290,
           chloroplastic [Nelumbo nucifera]
          Length = 621

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSD 155
           G L EA   IE MPIKPD G+W ALL AC+IH N +LAE   ++ F  DS+
Sbjct: 400 GQLSEAQEFIESMPIKPDSGVWGALLGACRIHLNVELAELAAKSLFELDSE 450


>XP_013444656.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
           KEH18681.1 pentatricopeptide (PPR) repeat protein
           [Medicago truncatula]
          Length = 967

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 29/49 (59%), Positives = 34/49 (69%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRAD 149
           G+LDEA   IE MPIKPD  IW ALL +CKIHKN +LAE   R  F+ +
Sbjct: 716 GFLDEASHFIETMPIKPDASIWGALLASCKIHKNIKLAEIAARKLFKME 764


>XP_018470380.1 PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Raphanus sativus]
          Length = 793

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 27/51 (52%), Positives = 33/51 (64%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSD 155
           GYL+ A + IE MP++PDP +W  LL ACKIHK+T LA  V    F  D D
Sbjct: 572 GYLERALQFIEAMPVEPDPSVWQTLLGACKIHKDTNLARAVSEKLFELDPD 622


>XP_006306315.1 hypothetical protein CARUB_v10012185mg [Capsella rubella]
           EOA39213.1 hypothetical protein CARUB_v10012185mg
           [Capsella rubella]
          Length = 866

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 26/52 (50%), Positives = 35/52 (67%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSDT 158
           G L+EAH+ I+ MP+ PDP +W ALLNAC+IH+N  L E   +  F  D D+
Sbjct: 647 GELEEAHKFIQKMPVTPDPAVWGALLNACRIHRNIDLGELSAQRIFELDKDS 698


>KZM80711.1 hypothetical protein DCAR_032307 [Daucus carota subsp. sativus]
          Length = 437

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 28/48 (58%), Positives = 33/48 (68%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRA 146
           G+LDEAHRLI  MP+KP+  +W ALL  CKIHKN +LA  V     RA
Sbjct: 312 GHLDEAHRLIMSMPMKPNDAVWGALLGGCKIHKNAELASLVAEKLIRA 359


>CDP12844.1 unnamed protein product [Coffea canephora]
          Length = 651

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 27/49 (55%), Positives = 32/49 (65%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRAD 149
           G L EA   I+CMPIKPD GIW ALL+ACKIH+N  + EY     F  +
Sbjct: 513 GKLKEALEYIQCMPIKPDAGIWAALLSACKIHRNADIGEYAAHHLFELE 561


>ADE75673.1 unknown [Picea sitchensis]
          Length = 246

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 28/51 (54%), Positives = 35/51 (68%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSD 155
           G LDEAH  I  MP++PD G+W ALL ACKIH N +LAE V    F+ +S+
Sbjct: 25  GCLDEAHDFISNMPLEPDDGVWGALLGACKIHLNIELAECVAEHLFKLESE 75


>XP_016652176.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460 isoform X2 [Prunus mume]
          Length = 503

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 31/66 (46%), Positives = 42/66 (63%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSDT*ATLYCLQ 182
           G L EA++ IE MP++PD G+W ALL+AC+IH N +LAE V     R D+ T  T Y L 
Sbjct: 408 GCLHEAYKFIETMPVEPDAGVWGALLSACRIHGNVELAELVVARLSRLDTQT-VTSYVLM 466

Query: 183 RFIHLQ 200
             I+ +
Sbjct: 467 SNIYAE 472


>XP_008243706.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like isoform X1 [Prunus mume]
          Length = 577

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 31/66 (46%), Positives = 42/66 (63%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSDT*ATLYCLQ 182
           G L EA++ IE MP++PD G+W ALL+AC+IH N +LAE V     R D+ T  T Y L 
Sbjct: 482 GCLHEAYKFIETMPVEPDAGVWGALLSACRIHGNVELAELVVARLSRLDTQT-VTSYVLM 540

Query: 183 RFIHLQ 200
             I+ +
Sbjct: 541 SNIYAE 546


>XP_011094314.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460 [Sesamum indicum]
          Length = 634

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 28/39 (71%), Positives = 30/39 (76%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAE 119
           G LDEAH LIE MPI+PD  +W ALL ACKIHKN  LAE
Sbjct: 418 GRLDEAHNLIEAMPIEPDGPVWGALLGACKIHKNVDLAE 456


>CAN66661.1 hypothetical protein VITISV_031721, partial [Vitis vinifera]
          Length = 569

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYV 125
           G+LDEAHRL E MP+KP+  +W ALL  C+IHKN +LA +V
Sbjct: 425 GFLDEAHRLXESMPMKPNDAVWGALLGGCRIHKNAELASHV 465


>XP_008342860.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial [Malus domestica]
          Length = 680

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = +3

Query: 3   GYLDEAHRLIECMPIKPDPGIWCALLNACKIHKNTQLAEYVERTQFRADSD 155
           G L EA  L+E MP+KPD GIW ALL+ACKIH+N ++ EY     F  + D
Sbjct: 539 GRLKEAVELVESMPVKPDAGIWSALLSACKIHRNVEMGEYACGRLFELEPD 589