BLASTX nr result
ID: Ephedra29_contig00025412
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00025412
(341 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011656084.1 PREDICTED: pentatricopeptide repeat-containing pr... 55 2e-06
KFK41580.1 hypothetical protein AALP_AA2G147300 [Arabis alpina] 54 3e-06
XP_015892908.1 PREDICTED: pentatricopeptide repeat-containing pr... 54 5e-06
XP_015892907.1 PREDICTED: pentatricopeptide repeat-containing pr... 54 5e-06
EEF41583.1 pentatricopeptide repeat-containing protein, putative... 54 5e-06
XP_015575701.1 PREDICTED: pentatricopeptide repeat-containing pr... 54 5e-06
XP_010518935.1 PREDICTED: pentatricopeptide repeat-containing pr... 53 8e-06
XP_008459588.1 PREDICTED: pentatricopeptide repeat-containing pr... 53 9e-06
>XP_011656084.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Cucumis sativus] KGN52661.1 hypothetical
protein Csa_5G649310 [Cucumis sativus]
Length = 688
Score = 54.7 bits (130), Expect = 2e-06
Identities = 28/88 (31%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +1
Query: 82 IRKLCRENNLQEALQGINKMLEMEIDVQSFTYQSFLRACGKTQNHIYAKKLH-RLLITLE 258
+++ R+N L+EAL ++ + + I V + T+ S + AC +T++ YAK++H + I
Sbjct: 86 VQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGL 145
Query: 259 KDTEFVQT-LIYAYAMCNTLLDARMVFD 339
++ EF++T L++ Y C +L +A+ +FD
Sbjct: 146 ENNEFIRTRLVHMYTACGSLEEAQKLFD 173
>KFK41580.1 hypothetical protein AALP_AA2G147300 [Arabis alpina]
Length = 682
Score = 54.3 bits (129), Expect = 3e-06
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +1
Query: 82 IRKLCRENNLQEALQGINKMLEMEIDVQSFTYQSFLRACGKTQNHIYAKKLH-RLLITLE 258
I+K R+NNL+EAL ++ + + I V + T+ + L AC + ++ I+ K++H + I
Sbjct: 76 IQKFARQNNLEEALTILDYLEQRGIPVNATTFSALLEACVRRKSLIHGKQVHVHIRINGL 135
Query: 259 KDTEFVQT-LIYAYAMCNTLLDARMVFD 339
+ EF+ T L++ Y C ++ DA+ VFD
Sbjct: 136 EKNEFLGTKLVHMYTACGSVKDAQKVFD 163
>XP_015892908.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15690
isoform X2 [Ziziphus jujuba] XP_015892909.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g15690
isoform X3 [Ziziphus jujuba]
Length = 593
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Frame = +1
Query: 28 NHHSCQQGEQALNLHNS-------GIRKLCRENNLQEALQGINKMLEMEIDVQSFTYQSF 186
NH + Q + LN + +R+LCRE L+EA++ ++K + + + +
Sbjct: 198 NHQASNQVQATLNQTPNVVPPSVEDLRRLCREGKLKEAIELMDKE---RVKADADCFHTL 254
Query: 187 LRACGKTQNHIYAKKLHRLLI--TLEKDTEFVQTLIYAYAMCNTLLDARMVFD 339
CGK+++ AKK+H + T D + + +I Y C ++ DAR VFD
Sbjct: 255 FELCGKSKSLENAKKVHDFFLQSTCRSDVQLINKVIEMYGKCASMTDARRVFD 307
>XP_015892907.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15690
isoform X1 [Ziziphus jujuba]
Length = 603
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Frame = +1
Query: 28 NHHSCQQGEQALNLHNS-------GIRKLCRENNLQEALQGINKMLEMEIDVQSFTYQSF 186
NH + Q + LN + +R+LCRE L+EA++ ++K + + + +
Sbjct: 208 NHQASNQVQATLNQTPNVVPPSVEDLRRLCREGKLKEAIELMDKE---RVKADADCFHTL 264
Query: 187 LRACGKTQNHIYAKKLHRLLI--TLEKDTEFVQTLIYAYAMCNTLLDARMVFD 339
CGK+++ AKK+H + T D + + +I Y C ++ DAR VFD
Sbjct: 265 FELCGKSKSLENAKKVHDFFLQSTCRSDVQLINKVIEMYGKCASMTDARRVFD 317
>EEF41583.1 pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 53.9 bits (128), Expect = 5e-06
Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +1
Query: 58 ALNLHNSGIRKLCRENNLQEALQGINKMLEMEIDVQSFTYQSFLRACGKTQNHIYAKKLH 237
+L+L NS I+ L ++ EAL+ K + FTY S L+AC N Y K +H
Sbjct: 20 SLSLLNSEIKSLVQQRQYIEALKLYTKS---PVYTTRFTYPSLLKACASLSNLQYGKTIH 76
Query: 238 RLLIT--LEKDTEFVQTLIYAYAMCNTLLDARMVFD 339
+IT L D +LI Y C T DA VFD
Sbjct: 77 SSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFD 112
>XP_015575701.1 PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Ricinus communis]
Length = 853
Score = 53.9 bits (128), Expect = 5e-06
Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +1
Query: 58 ALNLHNSGIRKLCRENNLQEALQGINKMLEMEIDVQSFTYQSFLRACGKTQNHIYAKKLH 237
+L+L NS I+ L ++ EAL+ K + FTY S L+AC N Y K +H
Sbjct: 20 SLSLLNSEIKSLVQQRQYIEALKLYTKS---PVYTTRFTYPSLLKACASLSNLQYGKTIH 76
Query: 238 RLLIT--LEKDTEFVQTLIYAYAMCNTLLDARMVFD 339
+IT L D +LI Y C T DA VFD
Sbjct: 77 SSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFD 112
>XP_010518935.1 PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Tarenaya hassleriana]
Length = 607
Score = 53.1 bits (126), Expect = 8e-06
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +1
Query: 73 NSGIRKLCRENNLQEALQGINKMLEMEIDVQSFTYQSFLRACGKTQNHIYAKKLHRLLIT 252
N+ IR +E+ +EAL N+M+E I+ +FTY + L+AC + + K++H +
Sbjct: 101 NTMIRGYVKESRFEEALDVYNEMIERGIEPDNFTYPALLKACTRMKAVRQGKQIHGHVFK 160
Query: 253 LEKDTE-FVQT-LIYAYAMCNTLLDARMVFD 339
L DT+ +VQ LI+ Y C + +R VF+
Sbjct: 161 LGLDTDIYVQNGLIHMYGKCGEIALSRAVFE 191
>XP_008459588.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Cucumis melo]
Length = 688
Score = 53.1 bits (126), Expect = 9e-06
Identities = 29/88 (32%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = +1
Query: 82 IRKLCRENNLQEALQGINKMLEMEIDVQSFTYQSFLRACGKTQNHIYAKKLH-RLLITLE 258
I++ R+N L+EAL ++ + + I V + T+ S + AC +T++ AK++H + I
Sbjct: 86 IQRFARQNKLKEALTILDYVDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL 145
Query: 259 KDTEFVQT-LIYAYAMCNTLLDARMVFD 339
++ EF++T L++ Y C +L DA+ +FD
Sbjct: 146 ENNEFIRTRLVHMYTACGSLEDAQKLFD 173