BLASTX nr result

ID: Ephedra29_contig00025341 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025341
         (777 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFB33412.1 hypothetical protein 2_5930_01, partial [Pinus mugo] ...    55   2e-06
AEW08296.1 hypothetical protein 2_5930_01, partial [Pinus radiat...    55   2e-06
AEW08295.1 hypothetical protein 2_5930_01, partial [Pinus lamber...    55   2e-06
XP_019078614.1 PREDICTED: uncharacterized protein LOC100257683 [...    57   9e-06

>AFB33412.1 hypothetical protein 2_5930_01, partial [Pinus mugo] AFB33413.1
           hypothetical protein 2_5930_01, partial [Pinus mugo]
           AFB33414.1 hypothetical protein 2_5930_01, partial
           [Pinus mugo]
          Length = 113

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 10/66 (15%)
 Frame = +3

Query: 99  DNE-MVDISEL-------FVASDTLDDEEQDF--WLGMDVDALQDPIDDIMGLDVPMDDL 248
           DNE  +D+S L       FV +D L  + QD   WL  + +ALQD   D MGLDVPMDDL
Sbjct: 47  DNEGAIDLSHLQLPGMEDFVVTDDLGGQGQDLGSWLNFEDEALQDGAGDFMGLDVPMDDL 106

Query: 249 SDLALV 266
           SDLA++
Sbjct: 107 SDLAMM 112


>AEW08296.1 hypothetical protein 2_5930_01, partial [Pinus radiata] AFG52179.1
           hypothetical protein 2_5930_01, partial [Pinus taeda]
           AFG52180.1 hypothetical protein 2_5930_01, partial
           [Pinus taeda] AFG52181.1 hypothetical protein 2_5930_01,
           partial [Pinus taeda] AFG52182.1 hypothetical protein
           2_5930_01, partial [Pinus taeda] AFG52183.1 hypothetical
           protein 2_5930_01, partial [Pinus taeda] AFG52184.1
           hypothetical protein 2_5930_01, partial [Pinus taeda]
           AFG52185.1 hypothetical protein 2_5930_01, partial
           [Pinus taeda] AFG52186.1 hypothetical protein 2_5930_01,
           partial [Pinus taeda] AFG52187.1 hypothetical protein
           2_5930_01, partial [Pinus taeda] AFG52188.1 hypothetical
           protein 2_5930_01, partial [Pinus taeda] AFG52189.1
           hypothetical protein 2_5930_01, partial [Pinus taeda]
           AFG52190.1 hypothetical protein 2_5930_01, partial
           [Pinus taeda] AFG52191.1 hypothetical protein 2_5930_01,
           partial [Pinus taeda] AFG52192.1 hypothetical protein
           2_5930_01, partial [Pinus taeda] AFG52193.1 hypothetical
           protein 2_5930_01, partial [Pinus taeda]
          Length = 113

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 10/66 (15%)
 Frame = +3

Query: 99  DNE-MVDISEL-------FVASDTLDDEEQDF--WLGMDVDALQDPIDDIMGLDVPMDDL 248
           DNE  +D+S L       FV +D L  + QD   WL  + +ALQD   D MGLDVPMDDL
Sbjct: 47  DNEGAIDLSHLQLPGMEDFVVTDDLGGQGQDLGSWLNFEDEALQDGAGDFMGLDVPMDDL 106

Query: 249 SDLALV 266
           SDLA++
Sbjct: 107 SDLAMM 112


>AEW08295.1 hypothetical protein 2_5930_01, partial [Pinus lambertiana]
           AFB33408.1 hypothetical protein 2_5930_01, partial
           [Pinus cembra] AFB33409.1 hypothetical protein
           2_5930_01, partial [Pinus cembra] AFB33410.1
           hypothetical protein 2_5930_01, partial [Pinus cembra]
           AFB33411.1 hypothetical protein 2_5930_01, partial
           [Pinus cembra]
          Length = 113

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 17/102 (16%)
 Frame = +3

Query: 12  KTSVSELEDATVLKKIENQGQEKCDTP-------DRDNE-MVDISEL-------FVASDT 146
           K SVS+  + T     + QG++K D           DNE  +D+S L       FV +D 
Sbjct: 15  KLSVSDSGEKTS----DKQGKQKNDHNPGANQDISHDNEGAIDLSHLQLPGMEDFVVNDD 70

Query: 147 LDDEEQDF--WLGMDVDALQDPIDDIMGLDVPMDDLSDLALV 266
           L  + QD   WL  + +AL D   D MGLDVPMDDLSDLA++
Sbjct: 71  LGGQGQDLGSWLNFEDEALHDGAGDFMGLDVPMDDLSDLAMM 112


>XP_019078614.1 PREDICTED: uncharacterized protein LOC100257683 [Vitis vinifera]
            CBI27872.3 unnamed protein product, partial [Vitis
            vinifera]
          Length = 1304

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
 Frame = +3

Query: 12   KTSVSELEDATVLKKIENQGQEKCDTPDRDNEMVDISELFVAS-------DTLDDEEQDF 170
            + SV +L D T     + + +   D  D ++E +D+S L +         D LDD+EQD 
Sbjct: 1213 QASVPKLSDTTRSSIAKEKDEFSMDALD-EHEAIDLSSLQLPGIDVLGVPDDLDDQEQDL 1271

Query: 171  --WLGMDVDALQDPIDDIMGLDVPMDDLSDLALV 266
              WL +D D LQD   D MGL++PMDDLSDL ++
Sbjct: 1272 GSWLNIDDDGLQD--HDFMGLEIPMDDLSDLNMM 1303


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