BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025175
         (413 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010430213.1 PREDICTED: pentatricopeptide repeat-containing pr...    67   3e-10
XP_006302331.1 hypothetical protein CARUB_v10020389mg [Capsella ...    66   6e-10
XP_010418163.1 PREDICTED: pentatricopeptide repeat-containing pr...    66   6e-10
XP_010473407.1 PREDICTED: pentatricopeptide repeat-containing pr...    66   6e-10
XP_017608106.1 PREDICTED: pentatricopeptide repeat-containing pr...    65   1e-09
XP_002886503.1 pentatricopeptide repeat-containing protein [Arab...    65   2e-09
XP_012484649.1 PREDICTED: pentatricopeptide repeat-containing pr...    63   5e-09
NP_564786.1 pentatricopeptide repeat 336 [Arabidopsis thaliana] ...    63   5e-09
AAM62848.1 putative membrane-associated salt-inducible protein [...    63   7e-09
XP_018846091.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   1e-08
XP_012091376.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   1e-08
XP_006352610.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   2e-08
OAP14485.1 PPR336 [Arabidopsis thaliana]                               62   2e-08
XP_010533825.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   2e-08
XP_016723490.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   2e-08
XP_012455712.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   2e-08
CDP04379.1 unnamed protein product [Coffea canephora]                  61   2e-08
JAU56535.1 Pentatricopeptide repeat-containing protein, mitochon...    61   3e-08
JAU34408.1 Pentatricopeptide repeat-containing protein, mitochon...    61   3e-08
XP_006391954.1 hypothetical protein EUTSA_v10023498mg [Eutrema s...    60   5e-08

>XP_010430213.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial [Camelina sativa]
          Length = 411

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = -2

Query: 244 TPSTTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASEL 74
           T  +T N + Q LC  KK ++AK LL   L   +  N  TY H+IR FC ++++E+A +L
Sbjct: 258 TGVSTYNVRIQSLCKRKKAKEAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDLEEAKKL 317

Query: 73  LELMINKGIVPSSSTYDLLLIALC 2
            ++M+N+G  P S  Y  L+  LC
Sbjct: 318 FKVMVNRGCKPDSECYFTLIYYLC 341


>XP_006302331.1 hypothetical protein CARUB_v10020389mg [Capsella rubella]
           EOA35229.1 hypothetical protein CARUB_v10020389mg
           [Capsella rubella]
          Length = 408

 Score = 65.9 bits (159), Expect = 6e-10
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = -2

Query: 244 TPSTTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASEL 74
           T  +T N + Q LC  KK ++AK LL   L   +  N  TY H+IR FC ++++E+A +L
Sbjct: 255 TGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDLEEAKKL 314

Query: 73  LELMINKGIVPSSSTYDLLLIALC 2
            ++M+N+G  P S  Y  L+  LC
Sbjct: 315 FKVMVNRGCKPDSECYFTLIYYLC 338


>XP_010418163.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Camelina sativa]
          Length = 413

 Score = 65.9 bits (159), Expect = 6e-10
 Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + Q LC  KK ++AK LL   L   +  N  TY H+IR FC ++++E+A +L ++
Sbjct: 263 STYNIRIQSLCKRKKAKEAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDLEEAKKLFKV 322

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N+G  P S  Y  L+  LC
Sbjct: 323 MVNRGCKPDSECYFTLIYYLC 343


>XP_010473407.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Camelina sativa]
          Length = 414

 Score = 65.9 bits (159), Expect = 6e-10
 Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + Q LC  KK ++AK LL   L   +  N  TY H+IR FC ++++E+A +L ++
Sbjct: 264 STYNIRIQSLCKRKKAKEAKALLDGTLSAGMKPNTVTYSHLIRGFCNEDDLEEAKKLFKV 323

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N+G  P S  Y  L+  LC
Sbjct: 324 MVNRGCKPDSECYFTLIYYLC 344


>XP_017608106.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Gossypium arboreum] XP_017608107.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g61870, mitochondrial-like [Gossypium arboreum]
          Length = 398

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + + LC  KK  +AK LL   L + I  N ATY H+I  FC + N+E+A  L + 
Sbjct: 248 STYNIRIRSLCMLKKSNEAKALLDGMLSKGIMPNSATYNHLIYGFCREGNLEEAKRLFKS 307

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+NKG+ P S  Y  L+  LC
Sbjct: 308 MVNKGLKPDSHCYFTLVYFLC 328


>XP_002886503.1 pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] EFH62762.1 pentatricopeptide
           repeat-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 408

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + Q LC  KK ++AK LL   L   +  N  TY H+IR FC +++ E+A +L ++
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDFEEAKKLFKV 317

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N+G  P S  Y  L+  LC
Sbjct: 318 MVNRGCKPDSECYFTLIYYLC 338


>XP_012484649.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Gossypium raimondii] XP_012484650.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g61870, mitochondrial-like [Gossypium raimondii]
           XP_016672223.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g61870, mitochondrial-like
           [Gossypium hirsutum] XP_016672224.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Gossypium hirsutum] KJB34610.1
           hypothetical protein B456_006G083300 [Gossypium
           raimondii] KJB34611.1 hypothetical protein
           B456_006G083300 [Gossypium raimondii]
          Length = 398

 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + + LC  KK  +AK LL   L + I  N  TY H+I  FC + N+E+A  L + 
Sbjct: 248 STYNIRIRSLCMLKKSNEAKALLDGMLSKGIIPNSVTYHHLIYGFCREGNLEEAKRLFKS 307

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+NKG+ P S  Y  L+  LC
Sbjct: 308 MVNKGLKPDSHCYFTLVYFLC 328


>NP_564786.1 pentatricopeptide repeat 336 [Arabidopsis thaliana] Q8LE47.2
           RecName: Full=Pentatricopeptide repeat-containing
           protein At1g61870, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
           AAL16159.1 At1g61870/F8K4_8 [Arabidopsis thaliana]
           AAC28506.1 Similar to gb|U08285 membrane-associated
           salt-inducible protein from Nicotiana tabacum. ESTs
           gb|T44131 and gb|T04378 come from this gene [Arabidopsis
           thaliana] AAL32936.1 Unknown protein [Arabidopsis
           thaliana] AAP88326.1 At1g61870 [Arabidopsis thaliana]
           AEE33898.1 pentatricopeptide repeat 336 [Arabidopsis
           thaliana]
          Length = 408

 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + Q LC  KK ++AK LL   L   +  N  TY H+I  FC +++ E+A +L ++
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKI 317

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N+G  P S  Y  L+  LC
Sbjct: 318 MVNRGCKPDSECYFTLIYYLC 338


>AAM62848.1 putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 407

 Score = 62.8 bits (151), Expect = 7e-09
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + Q LC  KK ++AK LL   L   +  N  TY H+I  FC +++ E+A +L ++
Sbjct: 257 STYNIRIQSLCKKKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKV 316

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N+G  P S  Y  L+  LC
Sbjct: 317 MVNRGCKPDSECYFTLIYYLC 337


>XP_018846091.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Juglans regia] XP_018810112.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g61870, mitochondrial-like [Juglans regia]
          Length = 403

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = -2

Query: 232 TINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLELM 62
           T N + Q LC  KK  +AK LL   +   +  N  TY H+I  FC + N++QA +L + M
Sbjct: 254 TYNIRIQSLCKLKKSSEAKALLDGMMSRGMKPNAVTYSHLIHGFCKEGNLDQAKKLFKTM 313

Query: 61  INKGIVPSSSTYDLLLIALC 2
           ++KG  P S+ Y  L+  LC
Sbjct: 314 VSKGCKPDSNCYFTLVYFLC 333


>XP_012091376.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial [Jatropha curcas] KDP20770.1 hypothetical
           protein JCGZ_21241 [Jatropha curcas]
          Length = 403

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + Q LC  K+  +AK LL   L   I  N  TY H+I  FC + N+E+A  L + 
Sbjct: 253 STYNTRIQSLCKLKRATEAKALLDGMLSRKIEPNSVTYCHLIHGFCSEGNLEEAKRLFKS 312

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N G  P S  Y  LL  LC
Sbjct: 313 MVNHGCQPDSECYFTLLYYLC 333


>XP_006352610.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial [Solanum tuberosum]
          Length = 402

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = -2

Query: 244 TPSTTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASEL 74
           T  +T N + Q LC  KK  +AK LL   L   +  N ATY H+I  FC + N+E+A  +
Sbjct: 249 TGISTYNVRIQSLCKLKKSGEAKALLDGILSRGLKANCATYGHLILGFCKEGNLEEAKSM 308

Query: 73  LELMINKGIVPSSSTYDLLLIALC 2
            + M+N G+ P +  Y  L+  LC
Sbjct: 309 FQKMVNSGLKPDAECYFTLVYYLC 332


>OAP14485.1 PPR336 [Arabidopsis thaliana]
          Length = 408

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + + LC  KK ++AK LL   L   +  N  TY H+I  FC +++ E+A +L ++
Sbjct: 258 STYNIRIRSLCKKKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKI 317

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N+G  P S  Y  L+  LC
Sbjct: 318 MVNRGCKPDSECYFTLIYYLC 338


>XP_010533825.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial [Tarenaya hassleriana]
          Length = 410

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + Q LC  +K  +AK LL   L   I  N  TY H+I  FC ++N+++A  L + 
Sbjct: 260 STYNIRIQSLCKRRKSAEAKALLDGMLSSGIKPNSVTYCHLIHGFCREDNLDEAKRLFKT 319

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N+G  P S  Y  L+  LC
Sbjct: 320 MVNRGCKPDSECYFTLIYYLC 340


>XP_016723490.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Gossypium hirsutum]
          Length = 396

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = -2

Query: 232 TINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLELM 62
           T N + Q LC  KK  +AK LL   L + I  N  TY H+I  FC + N+E+A  L   M
Sbjct: 248 TYNIRIQTLCILKKSNEAKTLLHGMLSKGINPNSVTYNHLIHGFCKEGNLEEAKSLFNSM 307

Query: 61  INKGIVPSSSTYDLLLIALC 2
           +N+G+ P S+ Y  ++  LC
Sbjct: 308 VNRGLEPDSNCYFNMVHFLC 327


>XP_012455712.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Gossypium raimondii] KJB69311.1
           hypothetical protein B456_011G015700 [Gossypium
           raimondii]
          Length = 396

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = -2

Query: 232 TINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLELM 62
           T N + Q LC  KK  +AK LL   L + I  N  TY H+I  FC + N+E+A  L   M
Sbjct: 248 TYNIRIQTLCILKKSNEAKTLLHGMLSKGINPNSVTYNHLIHGFCKEGNLEEAKSLFNSM 307

Query: 61  INKGIVPSSSTYDLLLIALC 2
           +N+G+ P S+ Y  ++  LC
Sbjct: 308 VNRGLEPDSNCYFNMVHFLC 327


>CDP04379.1 unnamed protein product [Coffea canephora]
          Length = 399

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
 Frame = -2

Query: 253 HQETPSTTI-NPQFQGLCNGKKLQQAKVL---LLRESITTNRATYEHIIRCFCMDNNIEQ 86
           H  TP T+I N + Q LC  K+ ++AK L   +L      N+ TY H+I  FC + ++E+
Sbjct: 242 HSITPGTSIYNIRIQKLCKLKRCREAKALFESILSRGYKPNKVTYHHLIHGFCKEGDLEE 301

Query: 85  ASELLELMINKGIVPSSSTYDLLLIALC 2
           A  L E M+  GI P    Y  L+  LC
Sbjct: 302 AKGLFERMVKSGIKPEGECYFTLVYFLC 329


>JAU56535.1 Pentatricopeptide repeat-containing protein, mitochondrial [Noccaea
           caerulescens]
          Length = 409

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + Q LC  KK  +AK LL   L   +  N  TY H+I  FC   + E+A +L ++
Sbjct: 259 STHNIRIQSLCKKKKSAEAKALLDGMLSSGMKPNSVTYTHLIHGFCNQGDFEEAKKLFKV 318

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N+G  P S+ Y  L+  LC
Sbjct: 319 MVNRGFKPDSACYFTLIYYLC 339


>JAU34408.1 Pentatricopeptide repeat-containing protein, mitochondrial [Noccaea
           caerulescens]
          Length = 409

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + Q LC  KK  +AK LL   L   +  N  TY H+I  FC   + E+A +L ++
Sbjct: 259 STHNIRIQSLCKKKKSAEAKALLDGMLSSGMKPNSVTYTHLIHGFCNQGDFEEAKKLFKV 318

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N+G  P S+ Y  L+  LC
Sbjct: 319 MVNRGFKPDSACYFTLIYYLC 339


>XP_006391954.1 hypothetical protein EUTSA_v10023498mg [Eutrema salsugineum]
           ESQ29240.1 hypothetical protein EUTSA_v10023498mg
           [Eutrema salsugineum]
          Length = 408

 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 65
           +T N + Q LC  KK  +AK LL   L   +  N  TY H+I  FC + ++++A +L ++
Sbjct: 258 STHNIRIQSLCKRKKSAEAKALLDGMLSSGMKPNSVTYGHLIHGFCSEGDLDEAKKLFKV 317

Query: 64  MINKGIVPSSSTYDLLLIALC 2
           M+N+G  P S  Y  L+  LC
Sbjct: 318 MVNRGCKPDSECYFTLIYYLC 338