BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025166
         (431 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAR91106.1 ribulose 1,5-bisphosphate carboxylase/oxygenase small...   101   2e-24
XP_004243079.1 PREDICTED: ribulose bisphosphate carboxylase smal...   100   3e-24
XP_004296442.1 PREDICTED: ribulose bisphosphate carboxylase smal...   100   5e-24
XP_017982474.1 PREDICTED: ribulose bisphosphate carboxylase smal...   100   5e-24
XP_004954709.1 PREDICTED: ribulose bisphosphate carboxylase smal...   100   9e-24
XP_010275523.1 PREDICTED: ribulose bisphosphate carboxylase smal...   100   1e-23
XP_009336182.1 PREDICTED: ribulose bisphosphate carboxylase smal...   100   1e-23
ABK25403.1 unknown [Picea sitchensis]                                 100   1e-23
KQL28719.1 hypothetical protein SETIT_019771mg, partial [Setaria...   100   2e-23
XP_006646894.1 PREDICTED: ribulose bisphosphate carboxylase smal...    99   2e-23
XP_015873720.1 PREDICTED: ribulose bisphosphate carboxylase smal...    99   2e-23
XP_010046977.1 PREDICTED: ribulose bisphosphate carboxylase smal...    99   2e-23
JAT47863.1 Ribulose bisphosphate carboxylase small chain, chloro...    99   2e-23
XP_018831083.1 PREDICTED: ribulose bisphosphate carboxylase smal...    99   2e-23
XP_009409740.1 PREDICTED: ribulose bisphosphate carboxylase smal...    99   2e-23
XP_016755783.1 PREDICTED: ribulose bisphosphate carboxylase smal...    98   3e-23
XP_016713500.1 PREDICTED: ribulose bisphosphate carboxylase smal...    98   3e-23
XP_012471750.1 PREDICTED: ribulose bisphosphate carboxylase smal...    98   3e-23
XP_017640552.1 PREDICTED: ribulose bisphosphate carboxylase smal...    98   3e-23
XP_006344531.1 PREDICTED: ribulose bisphosphate carboxylase smal...    98   3e-23

>BAR91106.1 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
           (rbcS) [Ipomoea batatas]
          Length = 167

 Score =  101 bits (251), Expect = 2e-24
 Identities = 41/71 (57%), Positives = 56/71 (78%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K ++   +TLCM+ W P +N ++ETLSYLPPL++E+I KEV YI++KGW+PCLEFD VG
Sbjct: 35  RKTVSNGSKTLCMKTWNPIDNKRFETLSYLPPLSQESIAKEVDYIINKGWIPCLEFDQVG 94

Query: 398 VVHRSNGRVPG 430
             HR N R+PG
Sbjct: 95  RQHRENSRMPG 105


>XP_004243079.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Solanum lycopersicum]
          Length = 169

 Score =  100 bits (250), Expect = 3e-24
 Identities = 43/71 (60%), Positives = 54/71 (76%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K I+   +T CM+ W P +N K+ETLSYLPP +EE+I KEV YI+ KGWVPCLEFD VG
Sbjct: 37  RKTISNGSKTYCMKSWNPIDNKKFETLSYLPPQSEESIAKEVDYIIKKGWVPCLEFDQVG 96

Query: 398 VVHRSNGRVPG 430
            VHR N ++PG
Sbjct: 97  YVHRENSKMPG 107


>XP_004296442.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Fragaria vesca subsp. vesca]
          Length = 190

 Score =  100 bits (250), Expect = 5e-24
 Identities = 40/71 (56%), Positives = 54/71 (76%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K ++ C RT CM+ W P  N K+ETLSYLPPL++++I KE+ Y++ KGW+PCLEFD VG
Sbjct: 52  KKTVSNCSRTCCMKSWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVG 111

Query: 398 VVHRSNGRVPG 430
            V R N R+PG
Sbjct: 112 YVQRENSRMPG 122


>XP_017982474.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone 512
           [Theobroma cacao]
          Length = 167

 Score =  100 bits (248), Expect = 5e-24
 Identities = 40/71 (56%), Positives = 55/71 (77%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K ++   RT CM+ W PF N K+ETLSYLPPL++++I KE+ Y++ KGW+PCLEFD VG
Sbjct: 36  RKTVSNGSRTHCMKTWNPFNNKKFETLSYLPPLSDDSIAKEIEYMMKKGWIPCLEFDEVG 95

Query: 398 VVHRSNGRVPG 430
           +V R N R+PG
Sbjct: 96  LVQRENSRIPG 106


>XP_004954709.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Setaria italica]
          Length = 185

 Score =  100 bits (248), Expect = 9e-24
 Identities = 43/81 (53%), Positives = 56/81 (69%)
 Frame = +2

Query: 188 KIVPMVSQKPQKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGW 367
           ++ P  S    +  +   RT CM+ W PF N +YE LSYLPPLT E++ KEV +I++KGW
Sbjct: 31  RLPPAGSSSTARAASNGLRTHCMKTWNPFTNRRYEALSYLPPLTAESVAKEVDFILAKGW 90

Query: 368 VPCLEFDNVGVVHRSNGRVPG 430
           VPCLEFD  G +HRSN R+PG
Sbjct: 91  VPCLEFDKAGEIHRSNSRMPG 111


>XP_010275523.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Nelumbo nucifera]
          Length = 180

 Score = 99.8 bits (247), Expect = 1e-23
 Identities = 41/70 (58%), Positives = 53/70 (75%)
 Frame = +2

Query: 221 KRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVGV 400
           K ++   RT CM+ W P  N K+E LSYLPPL++E+I KE+ YI+ KGW+PC+EFD VG 
Sbjct: 37  KTVSNGSRTHCMKTWNPINNKKFEALSYLPPLSDESIAKEIEYIIRKGWIPCIEFDEVGH 96

Query: 401 VHRSNGRVPG 430
           VHRSN R+PG
Sbjct: 97  VHRSNSRMPG 106


>XP_009336182.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Pyrus x bretschneideri]
          Length = 180

 Score = 99.8 bits (247), Expect = 1e-23
 Identities = 40/71 (56%), Positives = 56/71 (78%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K ++   RTLCM+VW P  N K+ETLSYLPPL++++I KE+ Y++ KGW+PCLEFD VG
Sbjct: 36  KKTVSNGSRTLCMKVWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVG 95

Query: 398 VVHRSNGRVPG 430
            V+R N ++PG
Sbjct: 96  YVYRENSQMPG 106


>ABK25403.1 unknown [Picea sitchensis]
          Length = 188

 Score = 99.8 bits (247), Expect = 1e-23
 Identities = 44/72 (61%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K      R  CMQVWPP  N KYETLSYLPPL++E+++KE+ Y++SKGWVPCLEFD VG
Sbjct: 53  EKTTTNGSRVHCMQVWPPINNRKYETLSYLPPLSQESLVKEIDYMISKGWVPCLEFDAVG 112

Query: 398 VVHRSNG-RVPG 430
            + R+NG  VPG
Sbjct: 113 QIQRTNGVMVPG 124


>KQL28719.1 hypothetical protein SETIT_019771mg, partial [Setaria italica]
          Length = 209

 Score =  100 bits (248), Expect = 2e-23
 Identities = 43/81 (53%), Positives = 56/81 (69%)
 Frame = +2

Query: 188 KIVPMVSQKPQKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGW 367
           ++ P  S    +  +   RT CM+ W PF N +YE LSYLPPLT E++ KEV +I++KGW
Sbjct: 55  RLPPAGSSSTARAASNGLRTHCMKTWNPFTNRRYEALSYLPPLTAESVAKEVDFILAKGW 114

Query: 368 VPCLEFDNVGVVHRSNGRVPG 430
           VPCLEFD  G +HRSN R+PG
Sbjct: 115 VPCLEFDKAGEIHRSNSRMPG 135


>XP_006646894.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Oryza brachyantha]
          Length = 181

 Score = 99.4 bits (246), Expect = 2e-23
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = +2

Query: 242 RTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVGVVHRSNGR 421
           RT CM+ W PF N +YE +SYLP LTEE+I+KEV +I+SKGWVPCLEFD  G +HRSN R
Sbjct: 50  RTYCMKTWNPFTNRRYEAMSYLPTLTEESIVKEVEFIMSKGWVPCLEFDKEGKIHRSNSR 109

Query: 422 VPG 430
           +PG
Sbjct: 110 MPG 112


>XP_015873720.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Ziziphus jujuba]
          Length = 169

 Score = 99.0 bits (245), Expect = 2e-23
 Identities = 39/70 (55%), Positives = 54/70 (77%)
 Frame = +2

Query: 221 KRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVGV 400
           K +++  RT CMQ W P  N K+ETLSYLPPL+++++ +E+ Y++ KGW+PCLEFD VG 
Sbjct: 38  KIVSSGFRTQCMQTWTPINNTKFETLSYLPPLSDDSVAREIDYMLKKGWIPCLEFDEVGR 97

Query: 401 VHRSNGRVPG 430
           VHR N R+PG
Sbjct: 98  VHRENSRIPG 107


>XP_010046977.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone 512
           [Eucalyptus grandis] KCW78698.1 hypothetical protein
           EUGRSUZ_C00150 [Eucalyptus grandis]
          Length = 169

 Score = 99.0 bits (245), Expect = 2e-23
 Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
 Frame = +2

Query: 176 VKGFKIVPMVSQKP--QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTY 349
           +K FK+ P+       Q+ ++   +T CM+ W P  N K+ETLSYLPPL++++I KE+ Y
Sbjct: 20  LKQFKLFPVKESAGWRQRTVSNGSKTYCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDY 79

Query: 350 IVSKGWVPCLEFDNVGVVHRSNGRVPG 430
           ++ KGWVPCLEFD VG V R N R+PG
Sbjct: 80  MLKKGWVPCLEFDEVGYVRRENSRMPG 106


>JAT47863.1 Ribulose bisphosphate carboxylase small chain, chloroplastic
           [Anthurium amnicola]
          Length = 170

 Score = 99.0 bits (245), Expect = 2e-23
 Identities = 40/71 (56%), Positives = 55/71 (77%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           ++ ++   RT CM+ W P  N K+E LSYLPPL++E++ KEV Y+V+KGW+PCLEFD VG
Sbjct: 37  RRTVSNGSRTHCMKTWNPINNKKFEALSYLPPLSDESVAKEVEYMVAKGWIPCLEFDEVG 96

Query: 398 VVHRSNGRVPG 430
            VHR+N R+PG
Sbjct: 97  QVHRTNSRMPG 107


>XP_018831083.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Juglans regia]
          Length = 174

 Score = 99.0 bits (245), Expect = 2e-23
 Identities = 40/71 (56%), Positives = 53/71 (74%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           QK I+   RT CM+ W P  N K+ETLSYLPPL++++I KE+ Y++ KGW+PCLEFD VG
Sbjct: 35  QKTISNGSRTFCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMIKKGWIPCLEFDQVG 94

Query: 398 VVHRSNGRVPG 430
            V R N ++PG
Sbjct: 95  SVRRENSQIPG 105


>XP_009409740.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone 512
           [Musa acuminata subsp. malaccensis]
          Length = 175

 Score = 99.0 bits (245), Expect = 2e-23
 Identities = 41/63 (65%), Positives = 52/63 (82%)
 Frame = +2

Query: 242 RTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVGVVHRSNGR 421
           RT CM+ W PF N KYE LSYLPPL++E+I KEV Y+++KG++PCLEFD VG VHR+N R
Sbjct: 45  RTRCMKTWNPFNNNKYEALSYLPPLSKESIAKEVDYMIAKGYIPCLEFDEVGQVHRTNSR 104

Query: 422 VPG 430
           +PG
Sbjct: 105 IPG 107


>XP_016755783.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Gossypium hirsutum]
          Length = 167

 Score = 98.2 bits (243), Expect = 3e-23
 Identities = 39/71 (54%), Positives = 53/71 (74%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K ++   RT CM+ W P  N K+ETLSYLPPL++++I KE+ Y++ KGW+PCLEFD VG
Sbjct: 36  RKTVSNGSRTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMMKKGWIPCLEFDEVG 95

Query: 398 VVHRSNGRVPG 430
            VHR N  +PG
Sbjct: 96  AVHRENSSIPG 106


>XP_016713500.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Gossypium hirsutum]
          Length = 167

 Score = 98.2 bits (243), Expect = 3e-23
 Identities = 39/71 (54%), Positives = 53/71 (74%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K ++   RT CM+ W P  N K+ETLSYLPPL++++I KE+ Y++ KGW+PCLEFD VG
Sbjct: 36  RKTVSNGSRTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMMKKGWIPCLEFDEVG 95

Query: 398 VVHRSNGRVPG 430
            VHR N  +PG
Sbjct: 96  AVHRENSSIPG 106


>XP_012471750.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Gossypium raimondii] KJB20540.1 hypothetical
           protein B456_003G153700 [Gossypium raimondii]
          Length = 167

 Score = 98.2 bits (243), Expect = 3e-23
 Identities = 39/71 (54%), Positives = 53/71 (74%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K ++   RT CM+ W P  N K+ETLSYLPPL++++I KE+ Y++ KGW+PCLEFD VG
Sbjct: 36  RKTVSNGSRTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMMKKGWIPCLEFDEVG 95

Query: 398 VVHRSNGRVPG 430
            VHR N  +PG
Sbjct: 96  AVHRENSSIPG 106


>XP_017640552.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Gossypium arboreum] KHG02980.1 Ribulose
           bisphosphate carboxylase small chain, chloroplastic
           [Gossypium arboreum]
          Length = 167

 Score = 98.2 bits (243), Expect = 3e-23
 Identities = 39/71 (54%), Positives = 53/71 (74%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K ++   RT CM+ W P  N K+ETLSYLPPL++++I KE+ Y++ KGW+PCLEFD VG
Sbjct: 36  RKTVSNGSRTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMMKKGWIPCLEFDEVG 95

Query: 398 VVHRSNGRVPG 430
            VHR N  +PG
Sbjct: 96  AVHRENSSIPG 106


>XP_006344531.1 PREDICTED: ribulose bisphosphate carboxylase small chain clone
           512-like [Solanum tuberosum]
          Length = 169

 Score = 98.2 bits (243), Expect = 3e-23
 Identities = 41/71 (57%), Positives = 53/71 (74%)
 Frame = +2

Query: 218 QKRIATCCRTLCMQVWPPFENPKYETLSYLPPLTEEAILKEVTYIVSKGWVPCLEFDNVG 397
           +K I+   +T CM+ W P +N K+ETLSYLPP +EE+I KEV Y++ KGW+PCLEFD VG
Sbjct: 37  RKTISNGSKTYCMKTWNPIDNKKFETLSYLPPQSEESIGKEVDYMIKKGWIPCLEFDQVG 96

Query: 398 VVHRSNGRVPG 430
            VHR N  +PG
Sbjct: 97  YVHRENSNMPG 107