BLASTX nr result
ID: Ephedra29_contig00025029
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00025029
(413 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 142 6e-38
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ... 141 2e-37
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 141 2e-37
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 141 2e-37
4OZS_A Chain A, Rna Binding Protein 130 5e-36
JAU10351.1 Pentatricopeptide repeat-containing protein, partial ... 130 2e-34
4PJR_A Chain A, Crystal Structure Of Designed Cppr-nre Protein 129 7e-34
XP_010418289.1 PREDICTED: pentatricopeptide repeat-containing pr... 134 1e-33
4PJQ_A Chain A, Crystal Structure Of Designed Cppr-polyg Protein... 126 5e-33
JAU47119.1 Pentatricopeptide repeat-containing protein, partial ... 124 6e-33
EOY05934.1 Pentatricopeptide repeat superfamily protein [Theobro... 129 2e-32
JAU62594.1 Pentatricopeptide repeat-containing protein, partial ... 121 3e-32
XP_002977891.1 hypothetical protein SELMODRAFT_107819 [Selaginel... 125 1e-31
XP_006391979.1 hypothetical protein EUTSA_v10023907mg [Eutrema s... 126 1e-31
JAU14886.1 Pentatricopeptide repeat-containing protein, partial ... 119 2e-31
XP_010418346.1 PREDICTED: pentatricopeptide repeat-containing pr... 125 3e-31
XP_010418338.1 PREDICTED: pentatricopeptide repeat-containing pr... 125 3e-31
XP_010430526.1 PREDICTED: pentatricopeptide repeat-containing pr... 124 5e-31
JAU30721.1 Pentatricopeptide repeat-containing protein, partial ... 117 6e-31
AHX42025.1 pentatricopeptide repeat-containing protein 11, parti... 120 6e-31
>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
Length = 460
Score = 142 bits (359), Expect = 6e-38
Identities = 67/134 (50%), Positives = 96/134 (71%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TYT LI GL K G +EA++L
Sbjct: 154 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKL 213
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV T++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 214 FEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 273
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 274 AGKLDEALKLFEEM 287
Score = 141 bits (356), Expect = 2e-37
Identities = 66/136 (48%), Positives = 96/136 (70%)
Frame = -2
Query: 412 MCPTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAM 233
+ PTV Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA+
Sbjct: 47 VAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL 106
Query: 232 RLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGL 53
+L M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GL
Sbjct: 107 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 166
Query: 52 CREGLLDEAMELCSEM 5
C+ G LDEA++L EM
Sbjct: 167 CKAGKLDEALKLFEEM 182
Score = 140 bits (354), Expect = 3e-37
Identities = 66/134 (49%), Positives = 95/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TYT LI GL K G +EA++L
Sbjct: 189 PDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKL 248
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 249 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 308
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 309 AGKLDEALKLFEEM 322
Score = 139 bits (349), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 224 PDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 283
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 284 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 343
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 344 AGKLDEALKLFEEM 357
Score = 139 bits (349), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 259 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 318
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 319 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 378
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 379 AGKLDEALKLFEEM 392
Score = 138 bits (348), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 119 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 178
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV T++IDG+CK G+++EA ++ EM K + P+VVTY +L++GLC+
Sbjct: 179 FEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCK 238
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 239 AGKLDEALKLFEEM 252
Score = 136 bits (343), Expect = 1e-35
Identities = 64/134 (47%), Positives = 93/134 (69%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 84 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 143
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTY +L++GLC+
Sbjct: 144 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCK 203
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 204 AGKLDEALKLFEEM 217
Score = 121 bits (304), Expect = 5e-30
Identities = 56/132 (42%), Positives = 91/132 (68%)
Frame = -2
Query: 400 VNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCS 221
V Y+ ++ +AGR + A ++F +++ + V+P V+TY LI GL K G +EA++L
Sbjct: 16 VRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFE 75
Query: 220 RMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREG 41
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+ G
Sbjct: 76 EMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 135
Query: 40 LLDEAMELCSEM 5
LDEA++L EM
Sbjct: 136 KLDEALKLFEEM 147
Score = 118 bits (296), Expect = 7e-29
Identities = 57/134 (42%), Positives = 84/134 (62%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 294 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 353
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+ +TY +V CR
Sbjct: 354 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCR 413
Query: 46 EGLLDEAMELCSEM 5
+EA SE+
Sbjct: 414 AKRFEEARGFLSEV 427
Score = 89.4 bits (220), Expect = 3e-18
Identities = 41/98 (41%), Positives = 65/98 (66%)
Frame = -2
Query: 298 DVITYTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIY 119
DV YT ++ L + G + A+ L + + + V P VV ++IDG+CK G+++EA ++
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74
Query: 118 TEMRSKDLLPNVVTYNSLVNGLCREGLLDEAMELCSEM 5
EM K + P+VVTYN+L++GLC+ G LDEA++L EM
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 112
Score = 87.0 bits (214), Expect = 2e-17
Identities = 41/104 (39%), Positives = 62/104 (59%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 329 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 388
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDL 95
M+E+ + PD + +++ C+ R EA+ +E+ DL
Sbjct: 389 FEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDL 432
>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
Length = 460
Score = 141 bits (356), Expect = 2e-37
Identities = 66/136 (48%), Positives = 96/136 (70%)
Frame = -2
Query: 412 MCPTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAM 233
+ PTV Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA+
Sbjct: 47 VAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL 106
Query: 232 RLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGL 53
+L M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GL
Sbjct: 107 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 166
Query: 52 CREGLLDEAMELCSEM 5
C+ G LDEA++L EM
Sbjct: 167 CKAGKLDEALKLFEEM 182
Score = 139 bits (351), Expect = 9e-37
Identities = 65/134 (48%), Positives = 95/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P+V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 259 PSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 318
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 319 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 378
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 379 AGKLDEALKLFEEM 392
Score = 139 bits (349), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 84 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 143
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 144 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 203
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 204 AGKLDEALKLFEEM 217
Score = 139 bits (349), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 119 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 178
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 179 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCK 238
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 239 AGKLDEALKLFEEM 252
Score = 137 bits (345), Expect = 7e-36
Identities = 64/134 (47%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P+V Y+ LIDG CKAG+ +A K+F +M K + P V+TY LI GL K G +EA++L
Sbjct: 224 PSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKL 283
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 284 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 343
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 344 AGKLDEALKLFEEM 357
Score = 136 bits (343), Expect = 1e-35
Identities = 64/134 (47%), Positives = 93/134 (69%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 154 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 213
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + P VV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 214 FEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCK 273
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 274 AGKLDEALKLFEEM 287
Score = 134 bits (337), Expect = 1e-34
Identities = 63/134 (47%), Positives = 92/134 (68%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + P V+TY LI GL K G +EA++L
Sbjct: 189 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKL 248
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + P VV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 249 FEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 308
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 309 AGKLDEALKLFEEM 322
Score = 121 bits (304), Expect = 5e-30
Identities = 56/132 (42%), Positives = 91/132 (68%)
Frame = -2
Query: 400 VNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCS 221
V Y+ ++ +AGR + A ++F +++ + V+P V+TY LI GL K G +EA++L
Sbjct: 16 VRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFE 75
Query: 220 RMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREG 41
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+ G
Sbjct: 76 EMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 135
Query: 40 LLDEAMELCSEM 5
LDEA++L EM
Sbjct: 136 KLDEALKLFEEM 147
Score = 118 bits (296), Expect = 7e-29
Identities = 57/134 (42%), Positives = 84/134 (62%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 294 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 353
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+ +TY +V CR
Sbjct: 354 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCR 413
Query: 46 EGLLDEAMELCSEM 5
+EA SE+
Sbjct: 414 AKRFEEARGFLSEV 427
Score = 89.4 bits (220), Expect = 3e-18
Identities = 41/98 (41%), Positives = 65/98 (66%)
Frame = -2
Query: 298 DVITYTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIY 119
DV YT ++ L + G + A+ L + + + V P VV ++IDG+CK G+++EA ++
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74
Query: 118 TEMRSKDLLPNVVTYNSLVNGLCREGLLDEAMELCSEM 5
EM K + P+VVTYN+L++GLC+ G LDEA++L EM
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 112
Score = 87.0 bits (214), Expect = 2e-17
Identities = 41/104 (39%), Positives = 62/104 (59%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 329 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 388
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDL 95
M+E+ + PD + +++ C+ R EA+ +E+ DL
Sbjct: 389 FEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDL 432
>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U10 In Complex With Its Target Rna U10
Length = 460
Score = 141 bits (356), Expect = 2e-37
Identities = 66/136 (48%), Positives = 96/136 (70%)
Frame = -2
Query: 412 MCPTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAM 233
+ PTV Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA+
Sbjct: 47 VAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL 106
Query: 232 RLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGL 53
+L M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GL
Sbjct: 107 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 166
Query: 52 CREGLLDEAMELCSEM 5
C+ G LDEA++L EM
Sbjct: 167 CKAGKLDEALKLFEEM 182
Score = 139 bits (349), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 84 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 143
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 144 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 203
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 204 AGKLDEALKLFEEM 217
Score = 139 bits (349), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 119 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 178
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 179 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 238
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 239 AGKLDEALKLFEEM 252
Score = 139 bits (349), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 154 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 213
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 214 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 273
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 274 AGKLDEALKLFEEM 287
Score = 139 bits (349), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 189 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 248
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 249 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 308
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 309 AGKLDEALKLFEEM 322
Score = 139 bits (349), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 224 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 283
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 284 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 343
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 344 AGKLDEALKLFEEM 357
Score = 139 bits (349), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 259 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 318
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 319 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 378
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 379 AGKLDEALKLFEEM 392
Score = 121 bits (304), Expect = 5e-30
Identities = 56/132 (42%), Positives = 91/132 (68%)
Frame = -2
Query: 400 VNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCS 221
V Y+ ++ +AGR + A ++F +++ + V+P V+TY LI GL K G +EA++L
Sbjct: 16 VRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFE 75
Query: 220 RMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREG 41
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+ G
Sbjct: 76 EMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 135
Query: 40 LLDEAMELCSEM 5
LDEA++L EM
Sbjct: 136 KLDEALKLFEEM 147
Score = 118 bits (296), Expect = 7e-29
Identities = 57/134 (42%), Positives = 84/134 (62%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 294 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 353
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+ +TY +V CR
Sbjct: 354 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCR 413
Query: 46 EGLLDEAMELCSEM 5
+EA SE+
Sbjct: 414 AKRFEEARGFLSEV 427
Score = 89.4 bits (220), Expect = 3e-18
Identities = 41/98 (41%), Positives = 65/98 (66%)
Frame = -2
Query: 298 DVITYTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIY 119
DV YT ++ L + G + A+ L + + + V P VV ++IDG+CK G+++EA ++
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74
Query: 118 TEMRSKDLLPNVVTYNSLVNGLCREGLLDEAMELCSEM 5
EM K + P+VVTYN+L++GLC+ G LDEA++L EM
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 112
Score = 87.0 bits (214), Expect = 2e-17
Identities = 41/104 (39%), Positives = 62/104 (59%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 329 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 388
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDL 95
M+E+ + PD + +++ C+ R EA+ +E+ DL
Sbjct: 389 FEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDL 432
>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
Length = 460
Score = 141 bits (356), Expect = 2e-37
Identities = 66/136 (48%), Positives = 96/136 (70%)
Frame = -2
Query: 412 MCPTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAM 233
+ PTV Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA+
Sbjct: 47 VAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL 106
Query: 232 RLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGL 53
+L M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GL
Sbjct: 107 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGL 166
Query: 52 CREGLLDEAMELCSEM 5
C+ G LDEA++L EM
Sbjct: 167 CKAGKLDEALKLFEEM 182
Score = 139 bits (351), Expect = 9e-37
Identities = 65/134 (48%), Positives = 96/134 (71%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY+ LI GL K G +EA++L
Sbjct: 154 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKL 213
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + P+VV +++IDG+CK G+++EA ++ EM K + PNVVTYN+L++GLC+
Sbjct: 214 FEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCK 273
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 274 AGKLDEALKLFEEM 287
Score = 139 bits (350), Expect = 1e-36
Identities = 65/134 (48%), Positives = 95/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 119 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 178
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV +++IDG+CK G+++EA ++ EM K + PNVVTY++L++GLC+
Sbjct: 179 FEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCK 238
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 239 AGKLDEALKLFEEM 252
Score = 139 bits (350), Expect = 1e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 259 PNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 318
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 319 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 378
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 379 AGKLDEALKLFEEM 392
Score = 138 bits (348), Expect = 2e-36
Identities = 65/134 (48%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V YS LIDG CKAG+ +A K+F +M K + P+V+TY LI GL K G +EA++L
Sbjct: 224 PNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKL 283
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 284 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 343
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 344 AGKLDEALKLFEEM 357
Score = 137 bits (344), Expect = 9e-36
Identities = 64/134 (47%), Positives = 94/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 84 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 143
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTY++L++GLC+
Sbjct: 144 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCK 203
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 204 AGKLDEALKLFEEM 217
Score = 136 bits (343), Expect = 1e-35
Identities = 64/134 (47%), Positives = 95/134 (70%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V YS LIDG CKAG+ +A K+F +M K + P+V+TY+ LI GL K G +EA++L
Sbjct: 189 PDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKL 248
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + P+VV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+
Sbjct: 249 FEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 308
Query: 46 EGLLDEAMELCSEM 5
G LDEA++L EM
Sbjct: 309 AGKLDEALKLFEEM 322
Score = 121 bits (304), Expect = 5e-30
Identities = 56/132 (42%), Positives = 91/132 (68%)
Frame = -2
Query: 400 VNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCS 221
V Y+ ++ +AGR + A ++F +++ + V+P V+TY LI GL K G +EA++L
Sbjct: 16 VRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFE 75
Query: 220 RMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREG 41
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+VVTYN+L++GLC+ G
Sbjct: 76 EMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 135
Query: 40 LLDEAMELCSEM 5
LDEA++L EM
Sbjct: 136 KLDEALKLFEEM 147
Score = 118 bits (296), Expect = 7e-29
Identities = 57/134 (42%), Positives = 84/134 (62%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 294 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 353
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E+ + PDVV ++IDG+CK G+++EA ++ EM K + P+ +TY +V CR
Sbjct: 354 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCR 413
Query: 46 EGLLDEAMELCSEM 5
+EA SE+
Sbjct: 414 AKRFEEARGFLSEV 427
Score = 89.4 bits (220), Expect = 3e-18
Identities = 41/98 (41%), Positives = 65/98 (66%)
Frame = -2
Query: 298 DVITYTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIY 119
DV YT ++ L + G + A+ L + + + V P VV ++IDG+CK G+++EA ++
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74
Query: 118 TEMRSKDLLPNVVTYNSLVNGLCREGLLDEAMELCSEM 5
EM K + P+VVTYN+L++GLC+ G LDEA++L EM
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 112
Score = 87.0 bits (214), Expect = 2e-17
Identities = 41/104 (39%), Positives = 62/104 (59%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG CKAG+ +A K+F +M K + PDV+TY LI GL K G +EA++L
Sbjct: 329 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 388
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDL 95
M+E+ + PD + +++ C+ R EA+ +E+ DL
Sbjct: 389 FEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDL 432
>4OZS_A Chain A, Rna Binding Protein
Length = 175
Score = 130 bits (328), Expect = 5e-36
Identities = 64/135 (47%), Positives = 92/135 (68%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG KAGR ++A ++F +M+ K V PDV+TY LI GL K G EA++L
Sbjct: 35 PDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQL 94
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ V PDVV ++IDG+ K GR+ EA ++ EM+ K + P+VVTYN+L++GL +
Sbjct: 95 FQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAK 154
Query: 46 EGLLDEAMELCSEMR 2
G L+EA++L EM+
Sbjct: 155 AGRLEEALQLFQEMK 169
Score = 128 bits (322), Expect = 4e-35
Identities = 62/130 (47%), Positives = 90/130 (69%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+ LIDG KAGR ++A ++F +M+ K V PDV+TY LI GL K G EA++L M
Sbjct: 5 YNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMK 64
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
E+ V PDVV ++IDG+ K GR+ EA ++ EM+ K + P+VVTYN+L++GL + G L+
Sbjct: 65 EKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLE 124
Query: 31 EAMELCSEMR 2
EA++L EM+
Sbjct: 125 EALQLFQEMK 134
Score = 98.6 bits (244), Expect = 2e-23
Identities = 49/106 (46%), Positives = 68/106 (64%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LIDG KAGR ++A ++F +M+ K V PDV+TY LI GL K G EA++L
Sbjct: 70 PDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQL 129
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLP 89
M E+ V PDVV ++IDG+ K GR+ EA ++ EM+ K + P
Sbjct: 130 FQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKP 175
Score = 98.2 bits (243), Expect = 3e-23
Identities = 47/99 (47%), Positives = 68/99 (68%)
Frame = -2
Query: 298 DVITYTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIY 119
DV+TY LI GL K G EA++L M E+ V PDVV ++IDG+ K GR+ EA ++
Sbjct: 1 DVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLF 60
Query: 118 TEMRSKDLLPNVVTYNSLVNGLCREGLLDEAMELCSEMR 2
EM+ K + P+VVTYN+L++GL + G L+EA++L EM+
Sbjct: 61 QEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMK 99
>JAU10351.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
caerulescens]
Length = 295
Score = 130 bits (326), Expect = 2e-34
Identities = 60/134 (44%), Positives = 87/134 (64%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P + Y+C+IDGFC G+ DAE++ DM +++ PDV+TY LIS L K+G F EA L
Sbjct: 80 PCIITYNCMIDGFCNYGKWSDAERLLRDMIERNIDPDVVTYNALISALVKQGKFFEAQGL 139
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
ML + PD SII G+CK+ R++EA+ ++ M SK P+VVT+N+L+NG C+
Sbjct: 140 YDEMLRRGISPDTFTYNSIIHGLCKQTRLDEARQMFDSMDSKGCSPDVVTFNTLINGYCK 199
Query: 46 EGLLDEAMELCSEM 5
G +D ++EL EM
Sbjct: 200 AGRVDNSLELFREM 213
Score = 112 bits (279), Expect = 2e-27
Identities = 51/129 (39%), Positives = 81/129 (62%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+ +ID CK G DA+ +F +M K +SP +ITY C+I G G +++A RL M+
Sbjct: 50 YNPIIDRLCKDGHLTDAQNLFDEMHEKGISPCIITYNCMIDGFCNYGKWSDAERLLRDMI 109
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
E N+ PDVV ++I + K+G+ EA+ +Y EM + + P+ TYNS+++GLC++ LD
Sbjct: 110 ERNIDPDVVTYNALISALVKQGKFFEAQGLYDEMLRRGISPDTFTYNSIIHGLCKQTRLD 169
Query: 31 EAMELCSEM 5
EA ++ M
Sbjct: 170 EARQMFDSM 178
Score = 85.1 bits (209), Expect = 3e-17
Identities = 41/134 (30%), Positives = 71/134 (52%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P + Y +++G CK G A + M+ + DV+ Y +I L K G +A L
Sbjct: 10 PNIVTYGTIVNGMCKIGDTVSALNLLRKMEKSHIEADVVIYNPIIDRLCKDGHLTDAQNL 69
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + P ++ +IDG C G+ ++A+ + +M +++ P+VVTYN+L++ L +
Sbjct: 70 FDEMHEKGISPCIITYNCMIDGFCNYGKWSDAERLLRDMIERNIDPDVVTYNALISALVK 129
Query: 46 EGLLDEAMELCSEM 5
+G EA L EM
Sbjct: 130 QGKFFEAQGLYDEM 143
Score = 80.9 bits (198), Expect = 1e-15
Identities = 42/135 (31%), Positives = 72/135 (53%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P Y+ +I G CK R +A ++F M SK SPDV+T+ LI+G K G + ++ L
Sbjct: 150 PDTFTYNSIIHGLCKQTRLDEARQMFDSMDSKGCSPDVVTFNTLINGYCKAGRVDNSLEL 209
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
ML + + V ++I G C+ G + A + EM S + P+ VT+ ++ GLC
Sbjct: 210 FREMLIRGIVANTVTYNTLIHGFCQVGDLTGALEKFQEMISSGVSPDAVTFRIMLAGLCS 269
Query: 46 EGLLDEAMELCSEMR 2
+ L +A+ + +++
Sbjct: 270 KEELQKAVAMFVDLQ 284
>4PJR_A Chain A, Crystal Structure Of Designed Cppr-nre Protein
Length = 303
Score = 129 bits (323), Expect = 7e-34
Identities = 64/135 (47%), Positives = 92/135 (68%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI G KAGR ++A ++F +M+ K + PDV+TY LISGL K G EA+ L
Sbjct: 36 PDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYNTLISGLGKAGRLEEALEL 95
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + PDVV T++I G+ K GR+ EA ++ EM+ K ++PNVVTYN+L++GL +
Sbjct: 96 FEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGK 155
Query: 46 EGLLDEAMELCSEMR 2
G L+EA+EL EM+
Sbjct: 156 AGRLEEALELFEEMK 170
Score = 127 bits (318), Expect = 4e-33
Identities = 63/135 (46%), Positives = 92/135 (68%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI G KAGR ++A ++F +M+ K + P+V+TY LISGL K G EA+ L
Sbjct: 106 PDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALEL 165
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + PDVV T++I G+ K GR+ EA ++ EM+ K ++PNVVTYN+L++GL +
Sbjct: 166 FEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGK 225
Query: 46 EGLLDEAMELCSEMR 2
G L+EA+EL EM+
Sbjct: 226 AGRLEEALELFEEMK 240
Score = 123 bits (308), Expect = 1e-31
Identities = 61/135 (45%), Positives = 91/135 (67%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI G KAGR ++A ++F +M+ K + PDV+TYT LISGL K G EA+ L
Sbjct: 141 PNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALEL 200
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + P+VV ++I G+ K GR+ EA ++ EM+ K ++P+VVTY +L++GL +
Sbjct: 201 FEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGK 260
Query: 46 EGLLDEAMELCSEMR 2
G L+EA+EL EM+
Sbjct: 261 AGRLEEALELFEEMK 275
Score = 122 bits (307), Expect = 2e-31
Identities = 61/135 (45%), Positives = 91/135 (67%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI G KAGR ++A ++F +M+ K + PDV+TYT LISGL K G EA+ L
Sbjct: 71 PDVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALEL 130
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + P+VV ++I G+ K GR+ EA ++ EM+ K ++P+VVTY +L++GL +
Sbjct: 131 FEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGK 190
Query: 46 EGLLDEAMELCSEMR 2
G L+EA+EL EM+
Sbjct: 191 AGRLEEALELFEEMK 205
Score = 122 bits (306), Expect = 2e-31
Identities = 60/130 (46%), Positives = 89/130 (68%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+ LI G KAGR ++A ++F +M+ K + PDV+TYT LISGL K G EA+ L M
Sbjct: 6 YNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMK 65
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
E+ + PDVV ++I G+ K GR+ EA ++ EM+ K ++P+VVTY +L++GL + G L+
Sbjct: 66 EKGIVPDVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLE 125
Query: 31 EAMELCSEMR 2
EA+EL EM+
Sbjct: 126 EALELFEEMK 135
Score = 114 bits (284), Expect = 4e-28
Identities = 56/122 (45%), Positives = 82/122 (67%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI G KAGR ++A ++F +M+ K + P+V+TY LISGL K G EA+ L
Sbjct: 176 PDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALEL 235
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + PDVV T++I G+ K GR+ EA ++ EM+ K ++PNVVTYN+L++GL +
Sbjct: 236 FEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGK 295
Query: 46 EG 41
G
Sbjct: 296 AG 297
Score = 95.1 bits (235), Expect = 6e-21
Identities = 46/97 (47%), Positives = 67/97 (69%)
Frame = -2
Query: 292 ITYTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTE 113
+TY LISGL K G EA+ L M E+ + PDVV T++I G+ K GR+ EA ++ E
Sbjct: 4 VTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEE 63
Query: 112 MRSKDLLPNVVTYNSLVNGLCREGLLDEAMELCSEMR 2
M+ K ++P+VVTYN+L++GL + G L+EA+EL EM+
Sbjct: 64 MKEKGIVPDVVTYNTLISGLGKAGRLEEALELFEEMK 100
>XP_010418289.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g64100-like [Camelina sativa]
Length = 834
Score = 134 bits (336), Expect = 1e-33
Identities = 61/134 (45%), Positives = 89/134 (66%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+C+IDGFC GR DAEK+ DM +SV PD++T+ LI+ FK+G EA L
Sbjct: 580 PNVYTYNCMIDGFCSFGRWGDAEKLLRDMIKRSVDPDIVTFNALINAFFKEGKVTEAEEL 639
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
S ML ++ PD + S+IDG KEG+V+EA+ +Y+EM +D+ P+ +TYNSL++G C+
Sbjct: 640 YSEMLRRDLSPDTITYNSLIDGFFKEGKVSEAEELYSEMLRRDISPDTITYNSLIDGFCK 699
Query: 46 EGLLDEAMELCSEM 5
LD+A + + M
Sbjct: 700 HSRLDDAKHMLNLM 713
Score = 124 bits (310), Expect = 3e-30
Identities = 56/130 (43%), Positives = 84/130 (64%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+C+IDGFC GR DAEK+ DM + ++P ++T+ LI+ K+G F EA L
Sbjct: 294 PDVYTYNCMIDGFCSFGRWGDAEKLLRDMIERQINPQLVTFNALINASVKEGKFTEAEEL 353
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
ML ++ PD V +SIIDG+CK R+++AK ++ M +K PNVVTY +L+NG C+
Sbjct: 354 YEEMLRRDIIPDTVTYSSIIDGLCKRNRLDDAKRMFDLMATKGCSPNVVTYTTLINGYCK 413
Query: 46 EGLLDEAMEL 17
+D+ +E+
Sbjct: 414 AKRVDDGVEI 423
Score = 116 bits (290), Expect = 2e-27
Identities = 54/129 (41%), Positives = 83/129 (64%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+ +ID CK G DA+ +F +M K + P+V TY C+I G G + +A +L M+
Sbjct: 550 YTAIIDRLCKDGHHSDAQNLFTEMHEKGIFPNVYTYNCMIDGFCSFGRWGDAEKLLRDMI 609
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
+ +V PD+V ++I+ KEG+V EA+ +Y+EM +DL P+ +TYNSL++G +EG +
Sbjct: 610 KRSVDPDIVTFNALINAFFKEGKVTEAEELYSEMLRRDLSPDTITYNSLIDGFFKEGKVS 669
Query: 31 EAMELCSEM 5
EA EL SEM
Sbjct: 670 EAEELYSEM 678
Score = 115 bits (289), Expect = 2e-27
Identities = 55/134 (41%), Positives = 83/134 (61%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P + ++ LI+ F K G+ +AE+++ +M + +SPD ITY LI G FK+G +EA L
Sbjct: 615 PDIVTFNALINAFFKEGKVTEAEELYSEMLRRDLSPDTITYNSLIDGFFKEGKVSEAEEL 674
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
S ML ++ PD + S+IDG CK R+++AK + M SK PN++T N+L++G CR
Sbjct: 675 YSEMLRRDISPDTITYNSLIDGFCKHSRLDDAKHMLNLMVSKGCSPNIITINTLIDGCCR 734
Query: 46 EGLLDEAMELCSEM 5
LD M+L EM
Sbjct: 735 AKRLDAGMKLLHEM 748
Score = 107 bits (267), Expect = 2e-24
Identities = 48/130 (36%), Positives = 78/130 (60%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ +ID CK G A+ +F +M K + PDV TY C+I G G + +A +L
Sbjct: 259 PDVVIYTAIIDRLCKDGHHSHAQNLFTEMHEKGIFPDVYTYNCMIDGFCSFGRWGDAEKL 318
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E + P +V ++I+ KEG+ EA+ +Y EM +D++P+ VTY+S+++GLC+
Sbjct: 319 LRDMIERQINPQLVTFNALINASVKEGKFTEAEELYEEMLRRDIIPDTVTYSSIIDGLCK 378
Query: 46 EGLLDEAMEL 17
LD+A +
Sbjct: 379 RNRLDDAKRM 388
Score = 96.7 bits (239), Expect = 1e-20
Identities = 48/134 (35%), Positives = 78/134 (58%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V +S L++G C GR +A + M + P+ +TY +++GL K G A+ L
Sbjct: 189 PNVVTFSTLMNGLCMEGRVLEATALLDRMVEEGHQPNEVTYGTVVNGLCKIGDTESALNL 248
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+M E ++ PDVV T+IID +CK+G + A+ ++TEM K + P+V TYN +++G C
Sbjct: 249 LRKMDERHIKPDVVIYTAIIDRLCKDGHHSHAQNLFTEMHEKGIFPDVYTYNCMIDGFCS 308
Query: 46 EGLLDEAMELCSEM 5
G +A +L +M
Sbjct: 309 FGRWGDAEKLLRDM 322
Score = 96.7 bits (239), Expect = 1e-20
Identities = 45/141 (31%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Frame = -2
Query: 412 MCPTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAM 233
+ P Y+ LIDGF K G+ +AE+++ +M + +SPD ITY LI G K ++A
Sbjct: 648 LSPDTITYNSLIDGFFKEGKVSEAEELYSEMLRRDISPDTITYNSLIDGFCKHSRLDDAK 707
Query: 232 RLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYN-----S 68
+ + M+ + P+++ ++IDG C+ R++ + EM + L+P+ V+YN +
Sbjct: 708 HMLNLMVSKGCSPNIITINTLIDGCCRAKRLDAGMKLLHEMSKRGLVPDTVSYNTLIHGT 767
Query: 67 LVNGLCREGLLDEAMELCSEM 5
L++G C+ G L+ A ++ EM
Sbjct: 768 LIHGFCQVGYLNGARDIFQEM 788
Score = 95.9 bits (237), Expect = 2e-20
Identities = 47/134 (35%), Positives = 72/134 (53%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P Y +++G CK G + A + M + + PDV+ YT +I L K G + A L
Sbjct: 224 PNEVTYGTVVNGLCKIGDTESALNLLRKMDERHIKPDVVIYTAIIDRLCKDGHHSHAQNL 283
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+ M E+ +FPDV +IDG C GR +A+ + +M + + P +VT+N+L+N +
Sbjct: 284 FTEMHEKGIFPDVYTYNCMIDGFCSFGRWGDAEKLLRDMIERQINPQLVTFNALINASVK 343
Query: 46 EGLLDEAMELCSEM 5
EG EA EL EM
Sbjct: 344 EGKFTEAEELYEEM 357
Score = 94.7 bits (234), Expect = 6e-20
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P YS +IDG CK R DA+++F M +K SP+V+TYT LI+G K ++ + +
Sbjct: 364 PDTVTYSSIIDGLCKRNRLDDAKRMFDLMATKGCSPNVVTYTTLINGYCKAKRVDDGVEI 423
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDL------LPNVVTYNSL 65
M + + + V S+I G C+ G ++ A I+ EM S + PNVVT+N+L
Sbjct: 424 FYLMHQRGIVANTVTYNSLIHGFCQMGDLSGALNIFEEMISNGVDETGLTTPNVVTFNTL 483
Query: 64 VNGLCREGLLDEAMELCSEM 5
+NGLC EG + EA L M
Sbjct: 484 MNGLCMEGRMLEATALLDRM 503
Score = 94.4 bits (233), Expect = 8e-20
Identities = 46/134 (34%), Positives = 78/134 (58%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V ++ L++G C GR +A + M + P+ +TY +++G+ K G A+ L
Sbjct: 475 PNVVTFNTLMNGLCMEGRMLEATALLDRMVEEGHQPNEVTYGTVVNGMCKIGDTESALNL 534
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+M E ++ DVV T+IID +CK+G ++A+ ++TEM K + PNV TYN +++G C
Sbjct: 535 LRKMDERHIKADVVIYTAIIDRLCKDGHHSDAQNLFTEMHEKGIFPNVYTYNCMIDGFCS 594
Query: 46 EGLLDEAMELCSEM 5
G +A +L +M
Sbjct: 595 FGRWGDAEKLLRDM 608
Score = 94.4 bits (233), Expect = 8e-20
Identities = 46/134 (34%), Positives = 75/134 (55%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P Y +++G CK G + A + M + + DV+ YT +I L K G ++A L
Sbjct: 510 PNEVTYGTVVNGMCKIGDTESALNLLRKMDERHIKADVVIYTAIIDRLCKDGHHSDAQNL 569
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+ M E+ +FP+V +IDG C GR +A+ + +M + + P++VT+N+L+N +
Sbjct: 570 FTEMHEKGIFPNVYTYNCMIDGFCSFGRWGDAEKLLRDMIKRSVDPDIVTFNALINAFFK 629
Query: 46 EGLLDEAMELCSEM 5
EG + EA EL SEM
Sbjct: 630 EGKVTEAEELYSEM 643
Score = 79.7 bits (195), Expect = 1e-14
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = -2
Query: 400 VNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCS 221
+ +S L+ FC + A FG + P+V+T+ L+ GL + +EA+ L
Sbjct: 120 IYSFSILMKCFCDCHKLSFALSTFGKITKLGFHPNVVTFNTLLHGLCLQDRLSEALALFD 179
Query: 220 RMLEENV-FPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCRE 44
M+E + P+VV +++++G+C EGRV EA + M + PN VTY ++VNGLC+
Sbjct: 180 HMVETGLTTPNVVTFSTLMNGLCMEGRVLEATALLDRMVEEGHQPNEVTYGTVVNGLCKI 239
Query: 43 GLLDEAMELCSEM 5
G + A+ L +M
Sbjct: 240 GDTESALNLLRKM 252
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Frame = -2
Query: 394 EYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRM 215
+++ +I K RP A ++ M + + D+ +++ L+ + A+ ++
Sbjct: 87 DFNKVIGVVVKMERPDVAISLYQKMGMRRIPVDIYSFSILMKCFCDCHKLSFALSTFGKI 146
Query: 214 LEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDL-LPNVVTYNSLVNGLCREGL 38
+ P+VV +++ G+C + R++EA ++ M L PNVVT+++L+NGLC EG
Sbjct: 147 TKLGFHPNVVTFNTLLHGLCLQDRLSEALALFDHMVETGLTTPNVVTFSTLMNGLCMEGR 206
Query: 37 LDEAMELCSEM 5
+ EA L M
Sbjct: 207 VLEATALLDRM 217
>4PJQ_A Chain A, Crystal Structure Of Designed Cppr-polyg Protein 4PJQ_B
Chain B, Crystal Structure Of Designed Cppr-polyg
Protein
Length = 303
Score = 126 bits (317), Expect = 5e-33
Identities = 63/135 (46%), Positives = 92/135 (68%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI G KAGR ++A ++F +M+ K + PDV+TYT LISGL K G EA+ L
Sbjct: 36 PDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALEL 95
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + PDVV T++I G+ K GR+ EA ++ EM+ K ++P+VVTY +L++GL +
Sbjct: 96 FEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGK 155
Query: 46 EGLLDEAMELCSEMR 2
G L+EA+EL EM+
Sbjct: 156 AGRLEEALELFEEMK 170
Score = 126 bits (317), Expect = 5e-33
Identities = 63/135 (46%), Positives = 92/135 (68%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI G KAGR ++A ++F +M+ K + PDV+TYT LISGL K G EA+ L
Sbjct: 71 PDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALEL 130
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + PDVV T++I G+ K GR+ EA ++ EM+ K ++P+VVTY +L++GL +
Sbjct: 131 FEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGK 190
Query: 46 EGLLDEAMELCSEMR 2
G L+EA+EL EM+
Sbjct: 191 AGRLEEALELFEEMK 205
Score = 126 bits (317), Expect = 5e-33
Identities = 63/135 (46%), Positives = 92/135 (68%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI G KAGR ++A ++F +M+ K + PDV+TYT LISGL K G EA+ L
Sbjct: 106 PDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALEL 165
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + PDVV T++I G+ K GR+ EA ++ EM+ K ++P+VVTY +L++GL +
Sbjct: 166 FEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGK 225
Query: 46 EGLLDEAMELCSEMR 2
G L+EA+EL EM+
Sbjct: 226 AGRLEEALELFEEMK 240
Score = 126 bits (317), Expect = 5e-33
Identities = 63/135 (46%), Positives = 92/135 (68%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI G KAGR ++A ++F +M+ K + PDV+TYT LISGL K G EA+ L
Sbjct: 141 PDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALEL 200
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + PDVV T++I G+ K GR+ EA ++ EM+ K ++P+VVTY +L++GL +
Sbjct: 201 FEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGK 260
Query: 46 EGLLDEAMELCSEMR 2
G L+EA+EL EM+
Sbjct: 261 AGRLEEALELFEEMK 275
Score = 124 bits (311), Expect = 4e-32
Identities = 61/130 (46%), Positives = 90/130 (69%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+ LI G KAGR ++A ++F +M+ K + PDV+TYT LISGL K G EA+ L M
Sbjct: 6 YTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMK 65
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
E+ + PDVV T++I G+ K GR+ EA ++ EM+ K ++P+VVTY +L++GL + G L+
Sbjct: 66 EKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLE 125
Query: 31 EAMELCSEMR 2
EA+EL EM+
Sbjct: 126 EALELFEEMK 135
Score = 113 bits (283), Expect = 6e-28
Identities = 56/122 (45%), Positives = 82/122 (67%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI G KAGR ++A ++F +M+ K + PDV+TYT LISGL K G EA+ L
Sbjct: 176 PDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALEL 235
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E+ + PDVV T++I G+ K GR+ EA ++ EM+ K ++P+VVTY +L++GL +
Sbjct: 236 FEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGK 295
Query: 46 EG 41
G
Sbjct: 296 AG 297
Score = 94.7 bits (234), Expect = 9e-21
Identities = 46/97 (47%), Positives = 67/97 (69%)
Frame = -2
Query: 292 ITYTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTE 113
+TYT LISGL K G EA+ L M E+ + PDVV T++I G+ K GR+ EA ++ E
Sbjct: 4 VTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEE 63
Query: 112 MRSKDLLPNVVTYNSLVNGLCREGLLDEAMELCSEMR 2
M+ K ++P+VVTY +L++GL + G L+EA+EL EM+
Sbjct: 64 MKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMK 100
>JAU47119.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
caerulescens]
Length = 223
Score = 124 bits (311), Expect = 6e-33
Identities = 57/134 (42%), Positives = 85/134 (63%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+C+IDGFC G+ DA + DM + +SP+V+T+ LI+ K+G F +A +L
Sbjct: 13 PNVITYNCMIDGFCNYGKWSDAVRFLHDMIKREISPNVVTFNALINAFVKEGKFTKAEKL 72
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+ ML +FPD V S+I G CK R+++AK ++ M SK P+VVT+N+L++G CR
Sbjct: 73 LNEMLCRGIFPDTVTYNSMIGGFCKHNRLDDAKRLFVLMASKGCSPDVVTFNTLIDGCCR 132
Query: 46 EGLLDEAMELCSEM 5
+D+ MEL EM
Sbjct: 133 ANRIDDGMELLREM 146
Score = 99.8 bits (247), Expect = 2e-23
Identities = 49/135 (36%), Positives = 78/135 (57%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P Y+ +I GFCK R DA+++F M SK SPDV+T+ LI G + ++ M L
Sbjct: 83 PDTVTYNSMIGGFCKHNRLDDAKRLFVLMASKGCSPDVVTFNTLIDGCCRANRIDDGMEL 142
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M + D V+ T+++ G C+ G +N A+ ++ EM S + N +TYN +++GLC
Sbjct: 143 LREMSRRGLVADTVSYTTLVHGFCQVGDLNAAEDLFQEMISHGVCRNTLTYNIMLDGLCD 202
Query: 46 EGLLDEAMELCSEMR 2
G L++A+E+ MR
Sbjct: 203 NGKLEKALEMFEVMR 217
Score = 60.1 bits (144), Expect = 3e-08
Identities = 29/104 (27%), Positives = 53/104 (50%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V ++ LIDG C+A R D ++ +M + + D ++YT L+ G + G N A L
Sbjct: 118 PDVVTFNTLIDGCCRANRIDDGMELLREMSRRGLVADTVSYTTLVHGFCQVGDLNAAEDL 177
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDL 95
M+ V + + ++DG+C G++ +A ++ MR +
Sbjct: 178 FQEMISHGVCRNTLTYNIMLDGLCDNGKLEKALEMFEVMRKSKI 221
Score = 57.0 bits (136), Expect = 4e-07
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = -2
Query: 229 LCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLC 50
L M E+ V P+V+ +IDG C G+ ++A +M +++ PNVVT+N+L+N
Sbjct: 2 LFDEMHEKGVSPNVITYNCMIDGFCNYGKWSDAVRFLHDMIKREISPNVVTFNALINAFV 61
Query: 49 REGLLDEAMELCSEM 5
+EG +A +L +EM
Sbjct: 62 KEGKFTKAEKLLNEM 76
>EOY05934.1 Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 644
Score = 129 bits (325), Expect = 2e-32
Identities = 64/130 (49%), Positives = 87/130 (66%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V YS LI G C GR K+A K F +M + ++ D++ Y LI G + GM+ EAMR+
Sbjct: 258 PDVVVYSSLISGLCSLGRLKEAVKFFDEMVGRGIAADLVMYNSLIHGYCQVGMWKEAMRI 317
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+RM+EE +FPDVV T++ID +CKEG+V EA I+ MR + PN+ TYNSL++GLC
Sbjct: 318 FNRMVEEGIFPDVVTFTTLIDCLCKEGKVGEAHKIFVLMRQQGKEPNLFTYNSLMSGLCM 377
Query: 46 EGLLDEAMEL 17
G LDEA +L
Sbjct: 378 VGQLDEAAKL 387
Score = 102 bits (253), Expect = 1e-22
Identities = 50/134 (37%), Positives = 81/134 (60%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P ++ LI C+AGR + AEK++ +M + SP TY ++ GL K G +EA+ L
Sbjct: 433 PNAVTFNTLIGALCQAGRLRTAEKMYHEMHACGQSPIFSTYVVMLDGLCKNGHIDEAIAL 492
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+ + C+ +IDG+C+ GR+ EA ++ E+ K L+P+VVTYN ++NGLC+
Sbjct: 493 FHSLGSTKYKSSIELCSILIDGMCRTGRLEEAMNMFNEIPKKGLVPDVVTYNIMINGLCK 552
Query: 46 EGLLDEAMELCSEM 5
+G+L EA +L +M
Sbjct: 553 KGMLLEADKLLIDM 566
Score = 94.4 bits (233), Expect = 7e-20
Identities = 44/129 (34%), Positives = 77/129 (59%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+ LI G+C+ G K+A +IF M + + PDV+T+T LI L K+G EA ++ M
Sbjct: 298 YNSLIHGYCQVGMWKEAMRIFNRMVEEGIFPDVVTFTTLIDCLCKEGKVGEAHKIFVLMR 357
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
++ P++ S++ G+C G+++EA ++ + + + PN +YN ++NG C+ +D
Sbjct: 358 QQGKEPNLFTYNSLMSGLCMVGQLDEAAKLFGMLADQGVEPNAFSYNIMINGYCKSRKID 417
Query: 31 EAMELCSEM 5
EA +L EM
Sbjct: 418 EAFQLFQEM 426
Score = 92.8 bits (229), Expect = 3e-19
Identities = 47/134 (35%), Positives = 77/134 (57%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V ++ LID CK G+ +A KIF M+ + P++ TY L+SGL G +EA +L
Sbjct: 328 PDVVTFTTLIDCLCKEGKVGEAHKIFVLMRQQGKEPNLFTYNSLMSGLCMVGQLDEAAKL 387
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+ ++ V P+ + +I+G CK +++EA ++ EM + PN VT+N+L+ LC+
Sbjct: 388 FGMLADQGVEPNAFSYNIMINGYCKSRKIDEAFQLFQEMHFQGCKPNAVTFNTLIGALCQ 447
Query: 46 EGLLDEAMELCSEM 5
G L A ++ EM
Sbjct: 448 AGRLRTAEKMYHEM 461
Score = 87.8 bits (216), Expect = 1e-17
Identities = 48/126 (38%), Positives = 73/126 (57%)
Frame = -2
Query: 382 LIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRMLEEN 203
L+ G C G+ +A ++F + + DV TY LI+GL K N A++L +M E N
Sbjct: 161 LLKGLCMEGKALEAVQVFDKINERGFQGDVFTYGILITGLCKIHETNFALKLYRKMAERN 220
Query: 202 VFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLDEAM 23
+V + IID +CK+ V+E ++ EM SK + P+VV Y+SL++GLC G L EA+
Sbjct: 221 CGGTLVIYSMIIDSLCKDRLVDEGVNMFFEMVSKGINPDVVVYSSLISGLCSLGRLKEAV 280
Query: 22 ELCSEM 5
+ EM
Sbjct: 281 KFFDEM 286
Score = 85.9 bits (211), Expect = 7e-17
Identities = 42/135 (31%), Positives = 73/135 (54%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P + Y ++DG CK G +A +F + S + + LI G+ + G EAM +
Sbjct: 468 PIFSTYVVMLDGLCKNGHIDEAIALFHSLGSTKYKSSIELCSILIDGMCRTGRLEEAMNM 527
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+ + ++ + PDVV +I+G+CK+G + EA + +M K LPN +++N ++ G +
Sbjct: 528 FNEIPKKGLVPDVVTYNIMINGLCKKGMLLEADKLLIDMEEKGCLPNSISFNIIIQGCLQ 587
Query: 46 EGLLDEAMELCSEMR 2
E + +AM L EMR
Sbjct: 588 ENNIHKAMNLLGEMR 602
Score = 84.7 bits (208), Expect = 2e-16
Identities = 41/129 (31%), Positives = 71/129 (55%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y LI G CK A K++ M ++ ++ Y+ +I L K + +E + + M+
Sbjct: 193 YGILITGLCKIHETNFALKLYRKMAERNCGGTLVIYSMIIDSLCKDRLVDEGVNMFFEMV 252
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
+ + PDVV +S+I G+C GR+ EA + EM + + ++V YNSL++G C+ G+
Sbjct: 253 SKGINPDVVVYSSLISGLCSLGRLKEAVKFFDEMVGRGIAADLVMYNSLIHGYCQVGMWK 312
Query: 31 EAMELCSEM 5
EAM + + M
Sbjct: 313 EAMRIFNRM 321
Score = 82.8 bits (203), Expect = 8e-16
Identities = 41/130 (31%), Positives = 71/130 (54%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P + Y+ L+ G C G+ +A K+FG + + V P+ +Y +I+G K +EA +L
Sbjct: 363 PNLFTYNSLMSGLCMVGQLDEAAKLFGMLADQGVEPNAFSYNIMINGYCKSRKIDEAFQL 422
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M + P+ V ++I +C+ GR+ A+ +Y EM + P TY +++GLC+
Sbjct: 423 FQEMHFQGCKPNAVTFNTLIGALCQAGRLRTAEKMYHEMHACGQSPIFSTYVVMLDGLCK 482
Query: 46 EGLLDEAMEL 17
G +DEA+ L
Sbjct: 483 NGHIDEAIAL 492
Score = 80.5 bits (197), Expect = 5e-15
Identities = 40/110 (36%), Positives = 65/110 (59%)
Frame = -2
Query: 388 SCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRMLE 209
S LIDG C+ GR ++A +F ++ K + PDV+TY +I+GL KKGM EA +L M E
Sbjct: 509 SILIDGMCRTGRLEEAMNMFNEIPKKGLVPDVVTYNIMINGLCKKGMLLEADKLLIDMEE 568
Query: 208 ENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVN 59
+ P+ ++ II G +E +++A + EMR ++ PN + L++
Sbjct: 569 KGCLPNSISFNIIIQGCLQENNIHKAMNLLGEMRRRNFAPNEAVTSMLLH 618
Score = 60.8 bits (146), Expect = 4e-08
Identities = 31/110 (28%), Positives = 59/110 (53%)
Frame = -2
Query: 334 IFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVC 155
+ GD+ + PD++T L+ GL +G EA+++ ++ E DV +I G+C
Sbjct: 142 VLGDIIRRGFEPDLVTVDRLLKGLCMEGKALEAVQVFDKINERGFQGDVFTYGILITGLC 201
Query: 154 KEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLDEAMELCSEM 5
K N A +Y +M ++ +V Y+ +++ LC++ L+DE + + EM
Sbjct: 202 KIHETNFALKLYRKMAERNCGGTLVIYSMIIDSLCKDRLVDEGVNMFFEM 251
>JAU62594.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
caerulescens]
Length = 188
Score = 121 bits (304), Expect = 3e-32
Identities = 56/125 (44%), Positives = 85/125 (68%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+ +IDG CK P DA +F +M++K + PDV+TY+ LIS L K G +++A RL S M+
Sbjct: 1 YNTIIDGLCKYKHPDDALNLFSEMENKGIRPDVVTYSSLISCLCKHGRWSDASRLLSDMI 60
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
+ + P+VV ++ID KEG++ EA+ +Y EM S+ + PN +TYNSL+NG CR+ L
Sbjct: 61 KRKINPNVVTVNALIDAFVKEGKLWEAEKLYEEMISRSIDPNTITYNSLINGFCRQSRLH 120
Query: 31 EAMEL 17
EA ++
Sbjct: 121 EAKQM 125
Score = 109 bits (273), Expect = 1e-27
Identities = 52/134 (38%), Positives = 82/134 (61%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V YS LI CK GR DA ++ DM + ++P+V+T LI K+G EA +L
Sbjct: 31 PDVVTYSSLISCLCKHGRWSDASRLLSDMIKRKINPNVVTVNALIDAFVKEGKLWEAEKL 90
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+ ++ P+ + S+I+G C++ R++EAK ++ M SK LPNVVTY++L+NG C+
Sbjct: 91 YEEMISRSIDPNTITYNSLINGFCRQSRLHEAKQMFDLMVSKGCLPNVVTYSTLINGFCK 150
Query: 46 EGLLDEAMELCSEM 5
+++ M+L EM
Sbjct: 151 HKKVEDGMKLFREM 164
Score = 91.7 bits (226), Expect = 1e-20
Identities = 43/122 (35%), Positives = 73/122 (59%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V + LID F K G+ +AEK++ +M S+S+ P+ ITY LI+G ++ +EA ++
Sbjct: 66 PNVVTVNALIDAFVKEGKLWEAEKLYEEMISRSIDPNTITYNSLINGFCRQSRLHEAKQM 125
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+ + P+VV +++I+G CK +V + ++ EM + L N VTYN+L+ G +
Sbjct: 126 FDLMVSKGCLPNVVTYSTLINGFCKHKKVEDGMKLFREMSQRGLAGNTVTYNTLIQGFFQ 185
Query: 46 EG 41
G
Sbjct: 186 AG 187
Score = 67.8 bits (164), Expect = 2e-11
Identities = 36/94 (38%), Positives = 57/94 (60%)
Frame = -2
Query: 286 YTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMR 107
Y +I GL K ++A+ L S M + + PDVV +S+I +CK GR ++A + ++M
Sbjct: 1 YNTIIDGLCKYKHPDDALNLFSEMENKGIRPDVVTYSSLISCLCKHGRWSDASRLLSDMI 60
Query: 106 SKDLLPNVVTYNSLVNGLCREGLLDEAMELCSEM 5
+ + PNVVT N+L++ +EG L EA +L EM
Sbjct: 61 KRKINPNVVTVNALIDAFVKEGKLWEAEKLYEEM 94
>XP_002977891.1 hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
EFJ21229.1 hypothetical protein SELMODRAFT_107819
[Selaginella moellendorffii]
Length = 385
Score = 125 bits (313), Expect = 1e-31
Identities = 65/136 (47%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDM-QSKSVSPDVITYTCLISGLFKKGMFNEAMR 230
P V YSCLIDG CK GR K+A +FG M +S S P+ +TY LISG + G +EAM
Sbjct: 122 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 181
Query: 229 LCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLC 50
L RM E PDVV T++++G CK R+++A + +M K L PNVVT+ SL++GLC
Sbjct: 182 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLC 241
Query: 49 REGLLDEAMELCSEMR 2
RE L +A+ + EMR
Sbjct: 242 RENRLSDAVHILGEMR 257
Score = 112 bits (280), Expect = 6e-27
Identities = 57/135 (42%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
PT Y+ LI G CKA R +A + +M PD+ TYT LI+G K ++A+R+
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEM-RSKDLLPNVVTYNSLVNGLC 50
+++ PDVV + +IDG+CKEGR+ EA ++ M +S +PN VTYNSL++G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 49 REGLLDEAMELCSEM 5
R G +DEAM L M
Sbjct: 172 RMGKMDEAMNLLERM 186
Score = 103 bits (258), Expect = 9e-24
Identities = 51/133 (38%), Positives = 79/133 (59%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P Y+ LI GFC+ G+ +A + M SPDV+TYT L++G K ++A L
Sbjct: 158 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 217
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
++M + + P+VV TS++DG+C+E R+++A I EMR K P V TYN++++G CR
Sbjct: 218 LNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 277
Query: 46 EGLLDEAMELCSE 8
L+EA + E
Sbjct: 278 VNQLEEARKFMLE 290
Score = 86.7 bits (213), Expect = 2e-17
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = -2
Query: 412 MCPTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAM 233
+ P V ++ L+DG C+ R DA I G+M+ KS SP V TY ++ G + EA
Sbjct: 226 LTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEAR 285
Query: 232 RLCSRMLEE-NVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNG 56
+ MLEE + P+VV+ +I G+CK R +EA + E R + P+VV Y ++++
Sbjct: 286 KF---MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342
Query: 55 LCREGLLDEAMELCSEM 5
LCRE +DEA + +M
Sbjct: 343 LCREKKVDEACRVYRKM 359
Score = 78.2 bits (191), Expect = 2e-14
Identities = 38/106 (35%), Positives = 61/106 (57%)
Frame = -2
Query: 322 MQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGR 143
+Q P +TY LISGL K +EA L M+ PD+ T++I G CK +
Sbjct: 45 VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104
Query: 142 VNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLDEAMELCSEM 5
++A ++ ++ ++ P+VVTY+ L++GLC+EG L EA++L M
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 150
Score = 74.7 bits (182), Expect = 4e-13
Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
PTV Y+ ++DG+C+ + ++A K ++ P+V+++ +I GL K +EAM L
Sbjct: 263 PTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMEL 320
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEM-RSKDLLPNVVTYNS 68
PDVV T++ID +C+E +V+EA +Y +M LPN +TY++
Sbjct: 321 VEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYST 374
>XP_006391979.1 hypothetical protein EUTSA_v10023907mg [Eutrema salsugineum]
ESQ29265.1 hypothetical protein EUTSA_v10023907mg
[Eutrema salsugineum]
Length = 457
Score = 126 bits (316), Expect = 1e-31
Identities = 61/135 (45%), Positives = 85/135 (62%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+C+ID FC GR DAE+ DM + +SPDV T++ LI+ FK+G F EA L
Sbjct: 218 PDVFTYNCMIDAFCNNGRWSDAERFLRDMIKRKISPDVGTFSALINAFFKEGKFTEAEEL 277
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
ML +FP+ + TS+I G CK R++EAK I+ M SK PN+VT+N+L++G R
Sbjct: 278 FKEMLARGIFPNTITYTSMIHGFCKHDRLDEAKKIFDLMASKGCSPNIVTFNTLIDGCYR 337
Query: 46 EGLLDEAMELCSEMR 2
+D+ +EL EMR
Sbjct: 338 ANRVDDGIELFYEMR 352
Score = 93.2 bits (230), Expect = 1e-19
Identities = 45/135 (33%), Positives = 76/135 (56%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P Y+ +I GFCK R +A+KIF M SK SP+++T+ LI G ++ ++ + L
Sbjct: 288 PNTITYTSMIHGFCKHDRLDEAKKIFDLMASKGCSPNIVTFNTLIDGCYRANRVDDGIEL 347
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M + + D V ++I G+C+ G N A+ + M S + N++TYN L++G C
Sbjct: 348 FYEMRQRGLVADTVTYNTLIHGLCQVGDFNSAEDFFHSMLSHGVCRNILTYNILLDGFCD 407
Query: 46 EGLLDEAMELCSEMR 2
G L++A+E+ M+
Sbjct: 408 NGKLEKALEMFEGMQ 422
Score = 91.7 bits (226), Expect = 5e-19
Identities = 46/134 (34%), Positives = 71/134 (52%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y +++G CK G A + M+ + +V+ YT +I L K G + +A L
Sbjct: 148 PDVVTYGTIVNGMCKMGDSVSALNLLRKMEKNHIEANVVIYTTIIDRLCKDGHYVDAQNL 207
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
S M E N+FPDV +ID C GR ++A+ +M + + P+V T+++L+N +
Sbjct: 208 LSEMHENNIFPDVFTYNCMIDAFCNNGRWSDAERFLRDMIKRKISPDVGTFSALINAFFK 267
Query: 46 EGLLDEAMELCSEM 5
EG EA EL EM
Sbjct: 268 EGKFTEAEELFKEM 281
Score = 83.2 bits (204), Expect = 5e-16
Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P + ++ LIDG +A R D ++F +M+ + + D +TY LI GL + G FN A
Sbjct: 323 PNIVTFNTLIDGCYRANRVDDGIELFYEMRQRGLVADTVTYNTLIHGLCQVGDFNSAEDF 382
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
ML V +++ ++DG C G++ +A ++ M+ ++ + VTYN +++G+C+
Sbjct: 383 FHSMLSHGVCRNILTYNILLDGFCDNGKLEKALEMFEGMQKSNIEVDSVTYNIIIHGMCK 442
Query: 46 EGLLDEAMEL-CS 11
+DEA +L CS
Sbjct: 443 GSKVDEAWDLFCS 455
Score = 82.0 bits (201), Expect = 1e-15
Identities = 46/134 (34%), Positives = 71/134 (52%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V ++ L+ G C R DA +F M S +VI +T L++ L + G EA+ L
Sbjct: 78 PDVVTFNTLLHGLCLEDRISDAVALFDQMLETDFSLNVIAFTTLMNDLCRNGRVFEAVAL 137
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
RM+E PDVV +I++G+CK G A + +M + NVV Y ++++ LC+
Sbjct: 138 VDRMVENGHQPDVVTYGTIVNGMCKMGDSVSALNLLRKMEKNHIEANVVIYTTIIDRLCK 197
Query: 46 EGLLDEAMELCSEM 5
+G +A L SEM
Sbjct: 198 DGHYVDAQNLLSEM 211
Score = 80.1 bits (196), Expect = 6e-15
Identities = 42/129 (32%), Positives = 71/129 (55%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
++ LI FC + A FG + PDV+T+ L+ GL + ++A+ L +ML
Sbjct: 48 FNILIKCFCSCSKLSFALSTFGKLTKLGFKPDVVTFNTLLHGLCLEDRISDAVALFDQML 107
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
E + +V+A T++++ +C+ GRV EA + M P+VVTY ++VNG+C+ G
Sbjct: 108 ETDFSLNVIAFTTLMNDLCRNGRVFEAVALVDRMVENGHQPDVVTYGTIVNGMCKMGDSV 167
Query: 31 EAMELCSEM 5
A+ L +M
Sbjct: 168 SALNLLRKM 176
Score = 80.1 bits (196), Expect = 6e-15
Identities = 38/129 (29%), Positives = 71/129 (55%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
++ L++ C+ GR +A + M PDV+TY +++G+ K G A+ L +M
Sbjct: 118 FTTLMNDLCRNGRVFEAVALVDRMVENGHQPDVVTYGTIVNGMCKMGDSVSALNLLRKME 177
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
+ ++ +VV T+IID +CK+G +A+ + +EM ++ P+V TYN +++ C G
Sbjct: 178 KNHIEANVVIYTTIIDRLCKDGHYVDAQNLLSEMHENNIFPDVFTYNCMIDAFCNNGRWS 237
Query: 31 EAMELCSEM 5
+A +M
Sbjct: 238 DAERFLRDM 246
Score = 61.2 bits (147), Expect = 3e-08
Identities = 31/130 (23%), Positives = 65/130 (50%)
Frame = -2
Query: 394 EYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRM 215
+++ L+ + RP ++ M+ + + D+ ++ LI + A+ ++
Sbjct: 12 DFNKLMGLILRVNRPDVVISLYQKMEMRRIPFDMYSFNILIKCFCSCSKLSFALSTFGKL 71
Query: 214 LEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLL 35
+ PDVV +++ G+C E R+++A ++ +M D NV+ + +L+N LCR G +
Sbjct: 72 TKLGFKPDVVTFNTLLHGLCLEDRISDAVALFDQMLETDFSLNVIAFTTLMNDLCRNGRV 131
Query: 34 DEAMELCSEM 5
EA+ L M
Sbjct: 132 FEAVALVDRM 141
>JAU14886.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
caerulescens]
Length = 185
Score = 119 bits (298), Expect = 2e-31
Identities = 54/129 (41%), Positives = 83/129 (64%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+C+I GFC G+ DA + DM + +SP+V+T++ LI+ K+G F +A +L + ML
Sbjct: 3 YNCMIHGFCNYGKWSDAVRFMHDMIKREISPNVVTFSALINAFVKEGKFTKAEKLLNEML 62
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
+FPD V S+I G CK R+++AK ++ M SK P+VVT+N+L++G CR +D
Sbjct: 63 CRGIFPDTVTYNSMIGGFCKHNRLDDAKRLFVLMASKGCSPDVVTFNTLIDGCCRANRID 122
Query: 31 EAMELCSEM 5
+ MEL EM
Sbjct: 123 DGMELLREM 131
Score = 89.0 bits (219), Expect = 2e-19
Identities = 42/118 (35%), Positives = 69/118 (58%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P Y+ +I GFCK R DA+++F M SK SPDV+T+ LI G + ++ M L
Sbjct: 68 PDTVTYNSMIGGFCKHNRLDDAKRLFVLMASKGCSPDVVTFNTLIDGCCRANRIDDGMEL 127
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGL 53
M + D V+ T+++ G C+ G +N A+ ++ EM S + P+++TYN +++GL
Sbjct: 128 LREMSRRGLVADTVSYTTLVHGFCQVGDLNAAEDLFQEMSSHGVCPDILTYNIMLDGL 185
Score = 74.7 bits (182), Expect = 5e-14
Identities = 32/92 (34%), Positives = 56/92 (60%)
Frame = -2
Query: 292 ITYTCLISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTE 113
ITY C+I G G +++A+R M++ + P+VV +++I+ KEG+ +A+ + E
Sbjct: 1 ITYNCMIHGFCNYGKWSDAVRFMHDMIKREISPNVVTFSALINAFVKEGKFTKAEKLLNE 60
Query: 112 MRSKDLLPNVVTYNSLVNGLCREGLLDEAMEL 17
M + + P+ VTYNS++ G C+ LD+A L
Sbjct: 61 MLCRGIFPDTVTYNSMIGGFCKHNRLDDAKRL 92
>XP_010418346.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g64100-like [Camelina sativa]
Length = 460
Score = 125 bits (313), Expect = 3e-31
Identities = 57/130 (43%), Positives = 84/130 (64%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V YSC+IDGFC GR DAEK+ DM + ++P ++T+ LI+ K+G F EA L
Sbjct: 246 PDVYTYSCMIDGFCSFGRWGDAEKLLRDMIERQINPQLVTFNALINASVKEGKFTEAEEL 305
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
ML ++ PD V +SIIDG+CK R+++AK ++ M +K PNVVTY +L+NG C+
Sbjct: 306 YEEMLRRDIIPDTVTYSSIIDGLCKRNRLDDAKRMFDLMATKGCSPNVVTYTTLINGYCK 365
Query: 46 EGLLDEAMEL 17
+D+ +E+
Sbjct: 366 AKRVDDGVEI 375
Score = 109 bits (272), Expect = 2e-25
Identities = 49/130 (37%), Positives = 80/130 (61%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ +ID CK G A+K+F +M K + PDV TY+C+I G G + +A +L
Sbjct: 211 PGVVIYTAIIDRLCKDGHHSHAQKLFTEMHEKGIFPDVYTYSCMIDGFCSFGRWGDAEKL 270
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M+E + P +V ++I+ KEG+ EA+ +Y EM +D++P+ VTY+S+++GLC+
Sbjct: 271 LRDMIERQINPQLVTFNALINASVKEGKFTEAEELYEEMLRRDIIPDTVTYSSIIDGLCK 330
Query: 46 EGLLDEAMEL 17
LD+A +
Sbjct: 331 RNRLDDAKRM 340
Score = 91.3 bits (225), Expect = 7e-19
Identities = 44/126 (34%), Positives = 71/126 (56%)
Frame = -2
Query: 382 LIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRMLEEN 203
+++G CK G + A + M+ + P V+ YT +I L K G + A +L + M E+
Sbjct: 184 VVNGMCKIGDTESALNLLRKMEQTHIKPGVVIYTAIIDRLCKDGHHSHAQKLFTEMHEKG 243
Query: 202 VFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLDEAM 23
+FPDV + +IDG C GR +A+ + +M + + P +VT+N+L+N +EG EA
Sbjct: 244 IFPDVYTYSCMIDGFCSFGRWGDAEKLLRDMIERQINPQLVTFNALINASVKEGKFTEAE 303
Query: 22 ELCSEM 5
EL EM
Sbjct: 304 ELYEEM 309
Score = 83.2 bits (204), Expect = 5e-16
Identities = 42/119 (35%), Positives = 67/119 (56%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P YS +IDG CK R DA+++F M +K SP+V+TYT LI+G K ++ + +
Sbjct: 316 PDTVTYSSIIDGLCKRNRLDDAKRMFDLMATKGCSPNVVTYTTLINGYCKAKRVDDGVEI 375
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLC 50
M + + + V S+I G C+ G ++ A I+ EM S + PN +T+ ++ GLC
Sbjct: 376 FYLMHQRGIVANTVTYNSLIHGFCQMGDLSGALNIFEEMISNGVAPNDITFRGMLVGLC 434
Score = 74.3 bits (181), Expect = 7e-13
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Frame = -2
Query: 400 VNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCL------------------ 275
+ +S L+ +C + A FG + P+V+T+T L
Sbjct: 122 IYSFSTLMKCYCSCHKLSFALSTFGKITKLGFHPNVVTFTTLLHGLCLQDRLSEALALFD 181
Query: 274 ---ISGLFKKGMFNEAMRLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRS 104
++G+ K G A+ L +M + ++ P VV T+IID +CK+G + A+ ++TEM
Sbjct: 182 HMVVNGMCKIGDTESALNLLRKMEQTHIKPGVVIYTAIIDRLCKDGHHSHAQKLFTEMHE 241
Query: 103 KDLLPNVVTYNSLVNGLCREGLLDEAMELCSEM 5
K + P+V TY+ +++G C G +A +L +M
Sbjct: 242 KGIFPDVYTYSCMIDGFCSFGRWGDAEKLLRDM 274
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/100 (27%), Positives = 51/100 (51%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI+G+CKA R D +IF M + + + +TY LI G + G + A+ +
Sbjct: 351 PNVVTYTTLINGYCKAKRVDDGVEIFYLMHQRGIVANTVTYNSLIHGFCQMGDLSGALNI 410
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMR 107
M+ V P+ + ++ G+C + +A + +++
Sbjct: 411 FEEMISNGVAPNDITFRGMLVGLCSKEEQRKAVAMLVDLQ 450
>XP_010418338.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g64100-like isoform X2 [Camelina sativa]
Length = 509
Score = 125 bits (314), Expect = 3e-31
Identities = 57/130 (43%), Positives = 85/130 (65%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V+ YSC+IDGFC GR DAEK+ DM + ++P ++T+ LI+ K+G F EA L
Sbjct: 295 PNVHTYSCMIDGFCSFGRWGDAEKLLRDMIERQINPQLVTFNALINASVKEGKFTEAEVL 354
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
ML ++ PD V +SIIDG+CK R+++AK ++ M +K PNVVTY +L+NG C+
Sbjct: 355 YGEMLRRDIIPDTVTYSSIIDGLCKRNRLDDAKRMFDLMATKGCSPNVVTYTTLINGYCK 414
Query: 46 EGLLDEAMEL 17
+D+ +E+
Sbjct: 415 AKRVDDGVEI 424
Score = 106 bits (265), Expect = 2e-24
Identities = 46/125 (36%), Positives = 79/125 (63%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+ +ID CK G DA+ +F +M K + P+V TY+C+I G G + +A +L M+
Sbjct: 265 YTAIIDRLCKDGHHSDAQNLFTEMLEKGIFPNVHTYSCMIDGFCSFGRWGDAEKLLRDMI 324
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
E + P +V ++I+ KEG+ EA+++Y EM +D++P+ VTY+S+++GLC+ LD
Sbjct: 325 ERQINPQLVTFNALINASVKEGKFTEAEVLYGEMLRRDIIPDTVTYSSIIDGLCKRNRLD 384
Query: 31 EAMEL 17
+A +
Sbjct: 385 DAKRM 389
Score = 89.4 bits (220), Expect = 4e-18
Identities = 44/134 (32%), Positives = 73/134 (54%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P Y +++G CK G + A + M + + +V+ YT +I L K G ++A L
Sbjct: 225 PNEVTYGTVVNGMCKIGDTESALNLLRKMDERRIKANVVIYTAIIDRLCKDGHHSDAQNL 284
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+ MLE+ +FP+V + +IDG C GR +A+ + +M + + P +VT+N+L+N +
Sbjct: 285 FTEMLEKGIFPNVHTYSCMIDGFCSFGRWGDAEKLLRDMIERQINPQLVTFNALINASVK 344
Query: 46 EGLLDEAMELCSEM 5
EG EA L EM
Sbjct: 345 EGKFTEAEVLYGEM 358
Score = 88.2 bits (217), Expect = 9e-18
Identities = 44/134 (32%), Positives = 77/134 (57%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V +S L++G C GR + + M + + P+ +TY +++G+ K G A+ L
Sbjct: 190 PNVVTFSTLMNGLCVEGRMLEGMDLLYRMVEEGLEPNEVTYGTVVNGMCKIGDTESALNL 249
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+M E + +VV T+IID +CK+G ++A+ ++TEM K + PNV TY+ +++G C
Sbjct: 250 LRKMDERRIKANVVIYTAIIDRLCKDGHHSDAQNLFTEMLEKGIFPNVHTYSCMIDGFCS 309
Query: 46 EGLLDEAMELCSEM 5
G +A +L +M
Sbjct: 310 FGRWGDAEKLLRDM 323
Score = 84.7 bits (208), Expect = 2e-16
Identities = 43/121 (35%), Positives = 67/121 (55%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P YS +IDG CK R DA+++F M +K SP+V+TYT LI+G K ++ + +
Sbjct: 365 PDTVTYSSIIDGLCKRNRLDDAKRMFDLMATKGCSPNVVTYTTLINGYCKAKRVDDGVEI 424
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M + + V ++I G C+ G +N A I+ EM S + PN +T+ +V LCR
Sbjct: 425 FYLMHRRGIVANTVTYNTLIHGFCQMGDLNGALNIFEEMISSGVAPNDITFRGMVAALCR 484
Query: 46 E 44
+
Sbjct: 485 K 485
Score = 80.1 bits (196), Expect = 7e-15
Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 1/135 (0%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDM-QSKSVSPDVITYTCLISGLFKKGMFNEAMR 230
P V +S L+ G C R +A +F M ++ +P+V+T++ L++GL +G E M
Sbjct: 154 PDVVTFSTLLHGLCLQDRISEAVVLFDHMVETGLTTPNVVTFSTLMNGLCVEGRMLEGMD 213
Query: 229 LCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLC 50
L RM+EE + P+ V ++++G+CK G A + +M + + NVV Y ++++ LC
Sbjct: 214 LLYRMVEEGLEPNEVTYGTVVNGMCKIGDTESALNLLRKMDERRIKANVVIYTAIIDRLC 273
Query: 49 REGLLDEAMELCSEM 5
++G +A L +EM
Sbjct: 274 KDGHHSDAQNLFTEM 288
Score = 76.6 bits (187), Expect = 1e-13
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Frame = -2
Query: 400 VNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCS 221
+ ++ L+ FC + A FG + PDV+T++ L+ GL + +EA+ L
Sbjct: 121 IYSFNILMKCFCSCHKLPFALSTFGKITKLGFHPDVVTFSTLLHGLCLQDRISEAVVLFD 180
Query: 220 RMLEENV-FPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCRE 44
M+E + P+VV +++++G+C EGR+ E + M + L PN VTY ++VNG+C+
Sbjct: 181 HMVETGLTTPNVVTFSTLMNGLCVEGRMLEGMDLLYRMVEEGLEPNEVTYGTVVNGMCKI 240
Query: 43 GLLDEAMELCSEM 5
G + A+ L +M
Sbjct: 241 GDTESALNLLRKM 253
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/99 (27%), Positives = 50/99 (50%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+ LI+G+CKA R D +IF M + + + +TY LI G + G N A+ +
Sbjct: 400 PNVVTYTTLINGYCKAKRVDDGVEIFYLMHRRGIVANTVTYNTLIHGFCQMGDLNGALNI 459
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEM 110
M+ V P+ + ++ +C++ +A + ++
Sbjct: 460 FEEMISSGVAPNDITFRGMVAALCRKKEQRKAVAMLVDL 498
>XP_010430526.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g64100-like [Camelina sativa]
Length = 430
Score = 124 bits (310), Expect = 5e-31
Identities = 57/125 (45%), Positives = 84/125 (67%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+C+IDGFC GR DAEK+ DM + ++PDV+T+T LIS L K+G F EA +L ML
Sbjct: 296 YNCMIDGFCSFGRWSDAEKLLRDMIDRQINPDVVTFTALISALVKEGKFIEADKLWDEML 355
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
++P+ V S+I G+C E R++EA ++ +M PNV+T+N+L+NGLC +G +
Sbjct: 356 RRGIYPNTVTYNSMIHGLCLEDRISEAVALFGQMAETGCTPNVITFNTLMNGLCGQGRVL 415
Query: 31 EAMEL 17
EA+ L
Sbjct: 416 EAVGL 420
Score = 108 bits (271), Expect = 2e-25
Identities = 50/129 (38%), Positives = 77/129 (59%)
Frame = -2
Query: 391 YSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRML 212
Y+ +ID CK G DA +F +M K + DV TY C+I G G +++A +L M+
Sbjct: 261 YNAIIDRLCKDGHHSDAHNLFSEMHEKGIVADVFTYNCMIDGFCSFGRWSDAEKLLRDMI 320
Query: 211 EENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLD 32
+ + PDVV T++I + KEG+ EA ++ EM + + PN VTYNS+++GLC E +
Sbjct: 321 DRQINPDVVTFTALISALVKEGKFIEADKLWDEMLRRGIYPNTVTYNSMIHGLCLEDRIS 380
Query: 31 EAMELCSEM 5
EA+ L +M
Sbjct: 381 EAVALFGQM 389
Score = 87.0 bits (214), Expect = 2e-17
Identities = 44/132 (33%), Positives = 72/132 (54%)
Frame = -2
Query: 400 VNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCS 221
+ ++ LI FC + A FG M PDV+T+ L+ GL + +EA+ L
Sbjct: 118 IYSFNILIKCFCDCRKLSFALSTFGKMAKLGFQPDVVTFNTLLHGLCLEDRISEAVFLFD 177
Query: 220 RMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREG 41
+M E PDV+A ++++G+C+EGRV E + M P++VTY ++VNG+C+ G
Sbjct: 178 QMAEMGCTPDVIAFNTLMNGLCREGRVLETLALVDRMVENGHQPDIVTYGAIVNGMCKMG 237
Query: 40 LLDEAMELCSEM 5
+ A+ L +M
Sbjct: 238 DTESALNLLRKM 249
Score = 85.9 bits (211), Expect = 5e-17
Identities = 44/134 (32%), Positives = 74/134 (55%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V ++ L+ G C R +A +F M +PDVI + L++GL ++G E + L
Sbjct: 151 PDVVTFNTLLHGLCLEDRISEAVFLFDQMAEMGCTPDVIAFNTLMNGLCREGRVLETLAL 210
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
RM+E PD+V +I++G+CK G A + +M + + +VV YN++++ LC+
Sbjct: 211 VDRMVENGHQPDIVTYGAIVNGMCKMGDTESALNLLRKMDTNHIKAHVVIYNAIIDRLCK 270
Query: 46 EGLLDEAMELCSEM 5
+G +A L SEM
Sbjct: 271 DGHHSDAHNLFSEM 284
Score = 84.0 bits (206), Expect = 2e-16
Identities = 40/134 (29%), Positives = 74/134 (55%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V ++ L++G C+ GR + + M PD++TY +++G+ K G A+ L
Sbjct: 186 PDVIAFNTLMNGLCREGRVLETLALVDRMVENGHQPDIVTYGAIVNGMCKMGDTESALNL 245
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
+M ++ VV +IID +CK+G ++A +++EM K ++ +V TYN +++G C
Sbjct: 246 LRKMDTNHIKAHVVIYNAIIDRLCKDGHHSDAHNLFSEMHEKGIVADVFTYNCMIDGFCS 305
Query: 46 EGLLDEAMELCSEM 5
G +A +L +M
Sbjct: 306 FGRWSDAEKLLRDM 319
Score = 82.8 bits (203), Expect = 6e-16
Identities = 42/134 (31%), Positives = 71/134 (52%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P + Y +++G CK G + A + M + + V+ Y +I L K G ++A L
Sbjct: 221 PDIVTYGAIVNGMCKMGDTESALNLLRKMDTNHIKAHVVIYNAIIDRLCKDGHHSDAHNL 280
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
S M E+ + DV +IDG C GR ++A+ + +M + + P+VVT+ +L++ L +
Sbjct: 281 FSEMHEKGIVADVFTYNCMIDGFCSFGRWSDAEKLLRDMIDRQINPDVVTFTALISALVK 340
Query: 46 EGLLDEAMELCSEM 5
EG EA +L EM
Sbjct: 341 EGKFIEADKLWDEM 354
Score = 67.0 bits (162), Expect = 2e-10
Identities = 34/130 (26%), Positives = 68/130 (52%)
Frame = -2
Query: 394 EYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRM 215
+++ +I + RP A ++ M+ + + ++ ++ LI + A+ +M
Sbjct: 85 DFNKVIGLVVRMNRPDVAISLYQKMELRRIPFNIYSFNILIKCFCDCRKLSFALSTFGKM 144
Query: 214 LEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLL 35
+ PDVV +++ G+C E R++EA ++ +M P+V+ +N+L+NGLCREG +
Sbjct: 145 AKLGFQPDVVTFNTLLHGLCLEDRISEAVFLFDQMAEMGCTPDVIAFNTLMNGLCREGRV 204
Query: 34 DEAMELCSEM 5
E + L M
Sbjct: 205 LETLALVDRM 214
>JAU30721.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
caerulescens]
Length = 157
Score = 117 bits (293), Expect = 6e-31
Identities = 53/129 (41%), Positives = 85/129 (65%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P V Y+C+IDGFC G+ DAE++ +M +++ PDV+TY+ LI+ L K+ F A L
Sbjct: 29 PDVVTYNCMIDGFCNYGKWSDAERLLREMIDRNIDPDVVTYSALINALVKEEEFLRAEEL 88
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
S ML + + PD +S+I G+CK+ R++EA+ ++ M SK PNVVT+ +L++G C+
Sbjct: 89 YSEMLRKGISPDTFTYSSMIHGLCKQTRLDEARQMFDSMDSKGCSPNVVTFTTLIDGYCK 148
Query: 46 EGLLDEAME 20
G +D ++E
Sbjct: 149 AGRVDNSLE 157
Score = 109 bits (273), Expect = 6e-28
Identities = 49/126 (38%), Positives = 80/126 (63%)
Frame = -2
Query: 382 LIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRLCSRMLEEN 203
+ID CK G DA+ +F +M K +SPDV+TY C+I G G +++A RL M++ N
Sbjct: 2 IIDRLCKDGHLTDAQNLFDEMHEKGISPDVVTYNCMIDGFCNYGKWSDAERLLREMIDRN 61
Query: 202 VFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCREGLLDEAM 23
+ PDVV +++I+ + KE A+ +Y+EM K + P+ TY+S+++GLC++ LDEA
Sbjct: 62 IDPDVVTYSALINALVKEEEFLRAEELYSEMLRKGISPDTFTYSSMIHGLCKQTRLDEAR 121
Query: 22 ELCSEM 5
++ M
Sbjct: 122 QMFDSM 127
>AHX42025.1 pentatricopeptide repeat-containing protein 11, partial [Campanula
peregrina]
Length = 267
Score = 120 bits (301), Expect = 6e-31
Identities = 60/136 (44%), Positives = 86/136 (63%)
Frame = -2
Query: 412 MCPTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAM 233
+ P V YS LI+G CK GR DA K+FG+M SK + P+ + YT LI+G K G + AM
Sbjct: 119 LVPDVFTYSSLINGLCKGGRMDDANKVFGEMCSKGLVPNDVIYTTLINGFCKDGKVSLAM 178
Query: 232 RLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGL 53
L RML + V PD++ ++I+ +CK G +NEA+ + EM K L + VTY +L++G
Sbjct: 179 ELYGRMLMKGVKPDLIMYNTLINVICKSGNINEARKLIDEMSLKGLKADKVTYTTLIDGC 238
Query: 52 CREGLLDEAMELCSEM 5
C+EG LD A+E+ M
Sbjct: 239 CKEGDLDAALEIRKRM 254
Score = 108 bits (270), Expect = 2e-26
Identities = 53/134 (39%), Positives = 82/134 (61%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P + ++ L++ FCK + KDA +F +M + P V++Y LI+G K G +E RL
Sbjct: 51 PNLYSFNILMNKFCKECKVKDAHLVFDEMSRSGLRPTVVSYNTLINGYCKWGNSDEGFRL 110
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M E + PDV +S+I+G+CK GR+++A ++ EM SK L+PN V Y +L+NG C+
Sbjct: 111 KKVMEESRLVPDVFTYSSLINGLCKGGRMDDANKVFGEMCSKGLVPNDVIYTTLINGFCK 170
Query: 46 EGLLDEAMELCSEM 5
+G + AMEL M
Sbjct: 171 DGKVSLAMELYGRM 184
Score = 103 bits (256), Expect = 3e-24
Identities = 49/134 (36%), Positives = 84/134 (62%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
PTV Y+ LI+G+CK G + ++ M+ + PDV TY+ LI+GL K G ++A ++
Sbjct: 86 PTVVSYNTLINGYCKWGNSDEGFRLKKVMEESRLVPDVFTYSSLINGLCKGGRMDDANKV 145
Query: 226 CSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGLCR 47
M + + P+ V T++I+G CK+G+V+ A +Y M K + P+++ YN+L+N +C+
Sbjct: 146 FGEMCSKGLVPNDVIYTTLINGFCKDGKVSLAMELYGRMLMKGVKPDLIMYNTLINVICK 205
Query: 46 EGLLDEAMELCSEM 5
G ++EA +L EM
Sbjct: 206 SGNINEARKLIDEM 219
Score = 64.3 bits (155), Expect = 1e-09
Identities = 36/136 (26%), Positives = 67/136 (49%)
Frame = -2
Query: 412 MCPTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAM 233
+C ++D K P A + ++ P++ ++ L++ K+ +A
Sbjct: 14 LCVPFQSCDQVLDQLMKLKSPVVAWDFYLEILGCGYPPNLYSFNILMNKFCKECKVKDAH 73
Query: 232 RLCSRMLEENVFPDVVACTSIIDGVCKEGRVNEAKLIYTEMRSKDLLPNVVTYNSLVNGL 53
+ M + P VV+ ++I+G CK G +E + M L+P+V TY+SL+NGL
Sbjct: 74 LVFDEMSRSGLRPTVVSYNTLINGYCKWGNSDEGFRLKKVMEESRLVPDVFTYSSLINGL 133
Query: 52 CREGLLDEAMELCSEM 5
C+ G +D+A ++ EM
Sbjct: 134 CKGGRMDDANKVFGEM 149
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = -2
Query: 406 PTVNEYSCLIDGFCKAGRPKDAEKIFGDMQSKSVSPDVITYTCLISGLFKKGMFNEAMRL 227
P + Y+ LI+ CK+G +A K+ +M K + D +TYT LI G K+G + A+ +
Sbjct: 191 PDLIMYNTLINVICKSGNINEARKLIDEMSLKGLKADKVTYTTLIDGCCKEGDLDAALEI 250
Query: 226 CSRMLEENVFPDVVACT 176
RM++E + D VA T
Sbjct: 251 RKRMIQEGIELDNVAYT 267