BLASTX nr result

ID: Ephedra29_contig00025012 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025012
         (442 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009594854.1 PREDICTED: testis-expressed sequence 2 protein-li...    54   9e-06
XP_009594853.1 PREDICTED: testis-expressed sequence 2 protein-li...    54   9e-06

>XP_009594854.1 PREDICTED: testis-expressed sequence 2 protein-like isoform X2
           [Nicotiana tomentosiformis] XP_016447108.1 PREDICTED:
           testis-expressed sequence 2 protein-like isoform X2
           [Nicotiana tabacum]
          Length = 826

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
 Frame = +3

Query: 60  MLSFILPYVMGAITVLVIEAAILVMIIRILLRPPKPKSVVVTQKDQLLPHNSGSAFIH-K 236
           ML   + +V+GA+TVL +EA  +V++IR L R       V  + D+  P       +H K
Sbjct: 1   MLLLFIVFVLGAVTVLAVEAVGVVLLIRWLNRR------VAREVDKAKPDGDFDFSLHQK 54

Query: 237 QGQAWVAILNFHKDTKGQLVQQGKGLKEAKVKRSQARDSFEYTPVLKNVRVAEHLLIFTD 416
           QG  WV       +   +     K LK+ KVK    ++  E TP  K  ++ +H L+ T+
Sbjct: 55  QGIVWV----LESERLPKAFPVDKALKQQKVK----KEILEVTPTQKFAQIKDHYLVLTE 106

Query: 417 TDDS 428
           +D S
Sbjct: 107 SDGS 110


>XP_009594853.1 PREDICTED: testis-expressed sequence 2 protein-like isoform X1
           [Nicotiana tomentosiformis] XP_016447107.1 PREDICTED:
           testis-expressed sequence 2 protein-like isoform X1
           [Nicotiana tabacum]
          Length = 830

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
 Frame = +3

Query: 60  MLSFILPYVMGAITVLVIEAAILVMIIRILLRPPKPKSVVVTQKDQLLPHNSGSAFIH-K 236
           ML   + +V+GA+TVL +EA  +V++IR L R       V  + D+  P       +H K
Sbjct: 1   MLLLFIVFVLGAVTVLAVEAVGVVLLIRWLNRR------VAREVDKAKPDGDFDFSLHQK 54

Query: 237 QGQAWVAILNFHKDTKGQLVQQGKGLKEAKVKRSQARDSFEYTPVLKNVRVAEHLLIFTD 416
           QG  WV       +   +     K LK+ KVK    ++  E TP  K  ++ +H L+ T+
Sbjct: 55  QGIVWV----LESERLPKAFPVDKALKQQKVK----KEILEVTPTQKFAQIKDHYLVLTE 106

Query: 417 TDDS 428
           +D S
Sbjct: 107 SDGS 110


Top