BLASTX nr result

ID: Ephedra29_contig00025011 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00025011
         (672 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010941832.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   2e-07

>XP_010941832.1 PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Elaeis guineensis]
          Length = 593

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
 Frame = +2

Query: 206 ASRRMVDLFC----NAEDANIRSAIELLSTSPEXXXXXXXXXXXXKTPDPLTAHHLYAFL 373
           A RR++ L      NA D N+  A++ L TSP                DPL A   Y FL
Sbjct: 48  AVRRLLKLLSPSSQNAHDPNLSHALDALRTSPTTISASAAATLVSAAADPLLAFDFYRFL 107

Query: 374 Q-LQPAFQPRPLLYYALLKNQLKSRNPDSKTLLFYLHEMHQRGLRFSSPNDYVLLYGSF- 547
           + L+P F P   L  ALL+ QL+SR+P    + FYL EM +  +  S  +   L  G F 
Sbjct: 108 RSLRPHFHPDSSLLSALLRTQLRSRSPHPFRIRFYLGEMRKHCVALSPADFRSLFTGLFP 167

Query: 548 LRFDL--SIADHIYDLMKQHYELVPI 619
            R DL  S+ D + +++    E+  I
Sbjct: 168 ERCDLARSLLDQLIEVLGPSSEIYSI 193


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