BLASTX nr result
ID: Ephedra29_contig00024876
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00024876
(679 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP78409.1 Copia protein [Cajanus cajan] 85 2e-17
CAN74029.1 hypothetical protein VITISV_013540 [Vitis vinifera] 89 1e-16
KRZ69287.1 Copia protein, partial [Trichinella sp. T8] 82 4e-16
KYP77285.1 Retrovirus-related Pol polyprotein from transposon TN... 86 5e-16
KRZ01816.1 Retrovirus-related Pol polyprotein from transposon TN... 86 1e-15
KYP72805.1 Retrovirus-related Pol polyprotein from transposon TN... 86 1e-15
KRZ71003.1 Retrovirus-related Pol polyprotein from transposon TN... 86 1e-15
KYP64150.1 Retrovirus-related Pol polyprotein from transposon TN... 85 1e-15
XP_016709245.1 PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug ... 86 2e-15
KMQ86082.1 gag-pol polyprotein [Lasius niger] 85 2e-15
CAA69272.1 lectin receptor kinase, partial [Arabidopsis thaliana] 85 2e-15
GAU22794.1 hypothetical protein TSUD_142340 [Trifolium subterran... 85 2e-15
CAB75469.1 copia-type reverse transcriptase-like protein [Arabid... 85 3e-15
GAU35153.1 hypothetical protein TSUD_217860 [Trifolium subterran... 84 3e-15
AAF16534.1 T26F17.17 [Arabidopsis thaliana] 84 4e-15
AAG50698.1 copia-type polyprotein, putative [Arabidopsis thalian... 84 4e-15
CAB71063.1 copia-type polyprotein [Arabidopsis thaliana] 84 4e-15
AAD50001.1 Hypothetical protein [Arabidopsis thaliana] 84 4e-15
OMO58967.1 Integrase, catalytic core [Corchorus capsularis] 84 5e-15
JAU74580.1 Retrovirus-related Pol polyprotein from transposon TN... 83 5e-15
>KYP78409.1 Copia protein [Cajanus cajan]
Length = 119
Score = 84.7 bits (208), Expect = 2e-17
Identities = 36/88 (40%), Positives = 57/88 (64%)
Frame = -2
Query: 339 TKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDI 160
T + ++N K + K+P E W G+KP+ H FG Y +PKEK KL+DK + I
Sbjct: 24 TAVYILNRCPTKVVQDKTPIEAWSGIKPSAKHLRVFGSICYIHVPKEKRHKLEDKTVRGI 83
Query: 159 FIGYPTGTKGYRLIDMETKNIIVSREIK 76
F+GY T +KGYR+ +++TK +I+SR+++
Sbjct: 84 FLGYSTQSKGYRVYNLQTKKLIISRDVE 111
>CAN74029.1 hypothetical protein VITISV_013540 [Vitis vinifera]
Length = 894
Score = 88.6 bits (218), Expect = 1e-16
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = -2
Query: 339 TKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDI 160
T + L+N K+L K+P E WYGVKP ++H FG YY +P+ K KLD +A+K I
Sbjct: 225 TSVYLLNRLPTKSLKNKTPYEEWYGVKPFVNHLKIFGSICYYHVPEPKRSKLDSRAQKGI 284
Query: 159 FIGYPTGTKGYRLIDMETKNIIVSREIK 76
IGY T TKGYR+ ++T +++SR +K
Sbjct: 285 LIGYGTSTKGYRIFCLQTNKVVLSRNVK 312
>KRZ69287.1 Copia protein, partial [Trichinella sp. T8]
Length = 143
Score = 81.6 bits (200), Expect = 4e-16
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = -2
Query: 291 KSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGYRLIDM 112
K+P E+W G+KPN+ H FG Y IPK+K RK D+KAK+ + +GY KGYRL++
Sbjct: 17 KTPFELWTGIKPNVEHIRIFGSKAYSYIPKQKRRKWDNKAKEGVIVGYSGSKKGYRLLNP 76
Query: 111 ETKNIIVSREIKEADTES-FENDKNIPKETTKNPPKY 4
T I +S +K + +S +N+ +PK + +Y
Sbjct: 77 RTNEIWISHSVKIIEDDSHMKNESAVPKGAIERSWEY 113
>KYP77285.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 386
Score = 85.9 bits (211), Expect = 5e-16
Identities = 38/104 (36%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = -2
Query: 339 TKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDI 160
T + ++N K + K+P E W G+KP+ H FG Y +P+EK KL+DK + I
Sbjct: 24 TAVYILNRCPTKVVQDKTPIEAWSGIKPSAKHLRVFGSICYIHVPEEKRHKLEDKTVRGI 83
Query: 159 FIGYPTGTKGYRLIDMETKNIIVSREIKEADTESFE-NDKNIPK 31
F+GY T +KGYR+ +++TK +I+SR+++ + ++ ND+ + K
Sbjct: 84 FLGYSTQSKGYRVYNLQTKKLIISRDVEVDENAAWNWNDEKVEK 127
>KRZ01816.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella zimbabwensis]
Length = 1544
Score = 85.9 bits (211), Expect = 1e-15
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = -2
Query: 291 KSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGYRLIDM 112
K+P E+W G+KPN+ H FG Y +PK+K RK D+KA++ + +GY + TKGYRL++
Sbjct: 624 KTPFELWTGIKPNVDHIRIFGSKAYSYVPKQKRRKWDNKAREGVIVGYGSTTKGYRLLNP 683
Query: 111 ETKNIIVSREIKEADTES-FENDKNIPKETTKNPPKYK 1
T I +SR +K + +S +N+ +PK + +Y+
Sbjct: 684 TTNEIWISRSVKIIEDDSHMKNESAVPKRAIERSREYE 721
>KYP72805.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 705
Score = 85.5 bits (210), Expect = 1e-15
Identities = 43/106 (40%), Positives = 64/106 (60%)
Frame = -2
Query: 339 TKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDI 160
T + L+N +A+ K+P E W GVKP H FG Y + K KLDDKA+ +I
Sbjct: 578 TAVYLLNRLPTRAVQEKTPIEAWNGVKPTAKHLKIFGSICYTHVAVAKRSKLDDKAEMEI 637
Query: 159 FIGYPTGTKGYRLIDMETKNIIVSREIKEADTESFENDKNIPKETT 22
F+GY +KGYR+ +M +K I++SR+I + D ++ N +NI + TT
Sbjct: 638 FLGYAANSKGYRVYNMRSKQIVISRDI-QIDENAYWNWENILQNTT 682
>KRZ71003.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella papuae]
Length = 1058
Score = 85.5 bits (210), Expect = 1e-15
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = -2
Query: 291 KSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGYRLIDM 112
K+P E+W G+KPN+ H FG Y IPK+K RK D+KA++ + +GY + TKGYRL++
Sbjct: 638 KTPFELWTGIKPNVDHIRIFGSKAYSYIPKQKRRKWDNKAREGVIVGYGSTTKGYRLLNP 697
Query: 111 ETKNIIVSREIKEADTES-FENDKNIPKETTKNPPKYK 1
T I +SR +K + +S +N+ +PK + +Y+
Sbjct: 698 TTNEIWISRSVKIIEDDSHMKNESAVPKRAIERLREYE 735
>KYP64150.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 474
Score = 85.1 bits (209), Expect = 1e-15
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = -2
Query: 327 LINHWLNKALDMKSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDIFIGY 148
L+N KA+ K+P E W G KP+ H FG YY +P EK KL+DK +DIF+GY
Sbjct: 32 LLNRCPTKAVWDKTPIEAWSGKKPSAKHLRVFGSIYYIHVPDEKRHKLEDKTVRDIFLGY 91
Query: 147 PTGTKGYRLIDMETKNIIVSREIKEADTESFENDK-NIPKETTKNP 13
+ +KGYR+ +++TK + +SR+I+ + ++ +K I K+T P
Sbjct: 92 NSQSKGYRVYNLQTKKLTISRDIEVDENATWNWEKERIEKKTIYMP 137
>XP_016709245.1 PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug resistance protein
3-like [Gossypium hirsutum]
Length = 2801
Score = 85.5 bits (210), Expect = 2e-15
Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Frame = -2
Query: 339 TKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDI 160
T + L+N A+ K+P E W+G KP++SH FG Y L+PKE+ KLD ++ +
Sbjct: 1993 TAVYLLNRLPTNAVKGKTPFEAWFGQKPSVSHLKVFGCLCYVLVPKERRTKLDRRSMPGV 2052
Query: 159 FIGYPTGTKGYRLIDMETKNIIVSREIKEADTESFEND---KNIPK 31
F+GY KGYR+ D TK ++VSR++K ++ S++ D N+P+
Sbjct: 2053 FVGYSNVKKGYRVFDPLTKKVVVSRDVKFSEASSWKWDGIEANLPE 2098
>KMQ86082.1 gag-pol polyprotein [Lasius niger]
Length = 1319
Score = 85.1 bits (209), Expect = 2e-15
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = -2
Query: 342 ITKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKD 163
+T L N ++++++ K+P E++ G KPNISH FG Y LIPK+K RK DDKA++
Sbjct: 623 LTATYLQNRMISRSIN-KTPVELFTGEKPNISHIRVFGSKVYSLIPKQKRRKWDDKAEEG 681
Query: 162 IFIGYPTGTKGYRLIDMETKNIIVSREIK--EADTESFENDKNIPKE 28
+ +GY TKGYR++D T I +SR ++ E D F + KE
Sbjct: 682 VLVGYDGNTKGYRILDPNTNRIWISRSVRIIEHDANQFSLHQTSQKE 728
>CAA69272.1 lectin receptor kinase, partial [Arabidopsis thaliana]
Length = 623
Score = 84.7 bits (208), Expect = 2e-15
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Frame = -2
Query: 411 LVSFPNSIMKLSFMALKITCNMKITKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEF 232
++ S++K + ++ + L+N K++ K+P E W G KP +SH F
Sbjct: 135 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 194
Query: 231 GKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGYRLIDMETKNIIVSREI-----KEAD 67
G + +P EK KLDDK++K IFIGY +KGY+L + +TK I+SR I E D
Sbjct: 195 GSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 254
Query: 66 TESFENDKNI--------PKETTKNPP 10
S E D N P+ T + PP
Sbjct: 255 WNSNEEDYNFFPHFEEDKPEPTREEPP 281
>GAU22794.1 hypothetical protein TSUD_142340 [Trifolium subterraneum]
Length = 818
Score = 84.7 bits (208), Expect = 2e-15
Identities = 39/99 (39%), Positives = 61/99 (61%)
Frame = -2
Query: 339 TKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDI 160
T + ++N KA+ K+P E W G KP+ H FG Y +PK+K KL+DK K I
Sbjct: 604 TAVYILNRCPTKAVQDKTPIETWCGKKPSAKHLRVFGSICYIHVPKQKRHKLEDKTTKGI 663
Query: 159 FIGYPTGTKGYRLIDMETKNIIVSREIKEADTESFENDK 43
F+GY T +KGYR+ +++TK + VSR+++ + S+ D+
Sbjct: 664 FLGYSTQSKGYRIYNLQTKKLDVSRDVEVDENASWNWDE 702
>CAB75469.1 copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 84.7 bits (208), Expect = 3e-15
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Frame = -2
Query: 411 LVSFPNSIMKLSFMALKITCNMKITKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEF 232
++ S++K + ++ + L+N K++ K+P E W G KP +SH F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 231 GKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGYRLIDMETKNIIVSREI-----KEAD 67
G + +P EK KLDDK++K IFIGY +KGY+L + +TK I+SR I E D
Sbjct: 698 GSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 66 TESFENDKNI--------PKETTKNPP 10
S E D N P+ T + PP
Sbjct: 758 WNSNEEDYNFFPHFEEDKPEPTREEPP 784
>GAU35153.1 hypothetical protein TSUD_217860 [Trifolium subterraneum]
Length = 858
Score = 84.3 bits (207), Expect = 3e-15
Identities = 36/91 (39%), Positives = 59/91 (64%)
Frame = -2
Query: 327 LINHWLNKALDMKSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDIFIGY 148
++N + KA+ K+P E W G KP+ H FG +Y +PK+K KL++K K IF+GY
Sbjct: 665 ILNRYPTKAVQDKTPIETWCGKKPSAKHLRVFGSIFYIHVPKQKRHKLENKTNKGIFLGY 724
Query: 147 PTGTKGYRLIDMETKNIIVSREIKEADTESF 55
T +KGYR+ +++TK + VSR+++ + S+
Sbjct: 725 STQSKGYRIYNLQTKKLDVSRDVEVDENASW 755
>AAF16534.1 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 84.3 bits (207), Expect = 4e-15
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Frame = -2
Query: 411 LVSFPNSIMKLSFMALKITCNMKITKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEF 232
++ S++K + ++ + L+N K++ K+P E W G KP +SH F
Sbjct: 577 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 636
Query: 231 GKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGYRLIDMETKNIIVSREI-----KEAD 67
G + +P EK KLDDK++K IFIGY +KGY+L + +TK I+SR I E D
Sbjct: 637 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 696
Query: 66 TESFENDKNI--------PKETTKNPP 10
S E D N P+ T + PP
Sbjct: 697 WNSNEEDYNFFPHFEEDEPEPTREEPP 723
>AAG50698.1 copia-type polyprotein, putative [Arabidopsis thaliana] AAG50765.1
copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 84.3 bits (207), Expect = 4e-15
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Frame = -2
Query: 411 LVSFPNSIMKLSFMALKITCNMKITKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEF 232
++ S++K + ++ + L+N K++ K+P E W G KP +SH F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 231 GKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGYRLIDMETKNIIVSREI-----KEAD 67
G + +P EK KLDDK++K IFIGY +KGY+L + +TK I+SR I E D
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 66 TESFENDKNI--------PKETTKNPP 10
S E D N P+ T + PP
Sbjct: 758 WNSNEEDYNFFPHFEEDKPEPTREEPP 784
>CAB71063.1 copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 84.3 bits (207), Expect = 4e-15
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Frame = -2
Query: 411 LVSFPNSIMKLSFMALKITCNMKITKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEF 232
++ S++K + ++ + L+N K++ K+P E W G KP +SH F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 231 GKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGYRLIDMETKNIIVSREI-----KEAD 67
G + +P EK KLDDK++K IFIGY +KGY+L + +TK I+SR I E D
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 66 TESFENDKNI--------PKETTKNPP 10
S E D N P+ T + PP
Sbjct: 758 WNSNEEDYNFFPHFEEDEPEPTREEPP 784
>AAD50001.1 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 84.3 bits (207), Expect = 4e-15
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Frame = -2
Query: 411 LVSFPNSIMKLSFMALKITCNMKITKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEF 232
++ S++K + ++ + L+N K++ K+P E W G KP +SH F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 231 GKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGYRLIDMETKNIIVSREI-----KEAD 67
G + +P EK KLDDK++K IFIGY +KGY+L + +TK I+SR I E D
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 66 TESFENDKNI--------PKETTKNPP 10
S E D N P+ T + PP
Sbjct: 758 WNSNEEDYNFFPHFEEDEPEPTREEPP 784
>OMO58967.1 Integrase, catalytic core [Corchorus capsularis]
Length = 501
Score = 83.6 bits (205), Expect = 5e-15
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Frame = -2
Query: 306 KALDMKSPTEVWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGY 127
KAL K+P E W+G KPN++H FG Y IPK K KLD+KA+ +F+GY T +KGY
Sbjct: 109 KALKNKTPYEAWFGQKPNVTHLRIFGSVCYARIPKAKRGKLDEKAEVGVFVGYNTRSKGY 168
Query: 126 RLIDMETKNIIVSREIKEADTESFENDKN---IPK 31
++ + T N+ V+R++ + ++ +KN +PK
Sbjct: 169 KIFNPATSNVYVNRDVNFDENAAWNWEKNEVDVPK 203
>JAU74580.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 409
Score = 83.2 bits (204), Expect = 5e-15
Identities = 44/110 (40%), Positives = 62/110 (56%)
Frame = -2
Query: 411 LVSFPNSIMKLSFMALKITCNMKITKMSLINHWLNKALDMKSPTEVWYGVKPNISHFMEF 232
LV +++K + LK T L N +AL+ K+P E W G KP+++H F
Sbjct: 247 LVEMARAMIKAKDLPLKFWAEAVHTAAYLQNRIPTRALENKTPLEAWNGTKPSLNHLKVF 306
Query: 231 GKTYYYLIPKEKWRKLDDKAKKDIFIGYPTGTKGYRLIDMETKNIIVSRE 82
G Y IP EK +K DDK+KK +F+GY + TKGYR+ +E I VSR+
Sbjct: 307 GCVCYVHIPDEKRKKWDDKSKKAVFVGYSSQTKGYRVYLLEEDKIDVSRD 356